RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 LMOD1P29536 600 aaPredicted RBP26.27■■□□□ 1.8
PDLIM4-206ENST00000474421 SF3B3Q15393 1217 aaKnown RBP26.27■■□□□ 1.8
PDLIM4-206ENST00000474421 NCBP3Q53F19 620 aaKnown RBP26.27■■□□□ 1.8
PDLIM4-206ENST00000474421 CREBZFQ9NS37 354 aa26.27■■□□□ 1.8
PDLIM4-206ENST00000474421 AOC3Q16853 763 aa26.26■■□□□ 1.79
PDLIM4-206ENST00000474421 SLC51AQ86UW1 340 aa26.26■■□□□ 1.79
PDLIM4-206ENST00000474421 PHAXQ9H814 394 aaKnown RBP26.26■■□□□ 1.79
PDLIM4-206ENST00000474421 MRS2Q9HD23 443 aa26.26■■□□□ 1.79
PDLIM4-206ENST00000474421 CLEC11AQ9Y240 323 aa26.26■■□□□ 1.79
PDLIM4-206ENST00000474421 ZNF428Q96B54 188 aa26.25■■□□□ 1.79
PDLIM4-206ENST00000474421 TAF1P21675 1872 aa26.25■■□□□ 1.79
PDLIM4-206ENST00000474421 IRS4O14654 1257 aaPredicted RBP26.24■■□□□ 1.79
PDLIM4-206ENST00000474421 WWC1Q8IX03 1113 aa26.24■■□□□ 1.79
PDLIM4-206ENST00000474421 ZBTB38Q8NAP3 1195 aaPredicted RBP26.24■■□□□ 1.79
PDLIM4-206ENST00000474421 ZNRF3Q9ULT6 936 aa26.24■■□□□ 1.79
PDLIM4-206ENST00000474421 ADAMTSL1Q8N6G6 1762 aa26.23■■□□□ 1.79
PDLIM4-206ENST00000474421 PCNTO95613 3336 aa26.23■■□□□ 1.79
PDLIM4-206ENST00000474421 PASKQ96RG2 1323 aa26.23■■□□□ 1.79
PDLIM4-206ENST00000474421 CCDC191Q8NCU4 936 aa26.23■■□□□ 1.79
PDLIM4-206ENST00000474421 IL16Q14005 1332 aa26.22■■□□□ 1.79
PDLIM4-206ENST00000474421 KIAA2012Q0VF49 1180 aa26.22■■□□□ 1.79
PDLIM4-206ENST00000474421 MYD88Q99836 296 aa26.22■■□□□ 1.79
PDLIM4-206ENST00000474421 LRRC37AA6NMS7 1700 aa26.22■■□□□ 1.79
PDLIM4-206ENST00000474421 RTL5Q5HYW3 569 aaPredicted RBP26.21■■□□□ 1.79
PDLIM4-206ENST00000474421 TSR2Q969E8 191 aaKnown RBP26.21■■□□□ 1.79
PDLIM4-206ENST00000474421 STK31Q9BXU1 1019 aa26.21■■□□□ 1.79
PDLIM4-206ENST00000474421 ITGBL1O95965 494 aaPredicted RBP26.2■■□□□ 1.78
PDLIM4-206ENST00000474421 SCNN1DP51172 638 aa26.2■■□□□ 1.78
PDLIM4-206ENST00000474421 IFFO2Q5TF58 517 aa26.2■■□□□ 1.78
PDLIM4-206ENST00000474421 TSPYL6Q8N831 410 aa26.2■■□□□ 1.78
PDLIM4-206ENST00000474421 METTL22Q9BUU2 404 aaPredicted RBP26.2■■□□□ 1.78
PDLIM4-206ENST00000474421 CWC25Q9NXE8 425 aaPredicted RBP26.2■■□□□ 1.78
PDLIM4-206ENST00000474421 PCCAP05165 728 aaPredicted RBP26.18■■□□□ 1.78
PDLIM4-206ENST00000474421 USP50Q70EL3 339 aaPredicted RBP26.18■■□□□ 1.78
PDLIM4-206ENST00000474421 CNTROBQ8N137 903 aa26.18■■□□□ 1.78
PDLIM4-206ENST00000474421 CELF1Q92879 486 aaKnown RBP26.18■■□□□ 1.78
PDLIM4-206ENST00000474421 LTBP1Q14766 1721 aa26.17■■□□□ 1.78
PDLIM4-206ENST00000474421 TMEM88BA6NKF7 163 aa26.17■■□□□ 1.78
PDLIM4-206ENST00000474421 EPS15P42566 896 aa26.17■■□□□ 1.78
PDLIM4-206ENST00000474421 CXCL9Q07325 125 aa26.17■■□□□ 1.78
PDLIM4-206ENST00000474421 TNIP1Q15025 636 aa26.17■■□□□ 1.78
PDLIM4-206ENST00000474421 RPS8P62241 208 aaKnown RBP26.16■■□□□ 1.78
PDLIM4-206ENST00000474421 TWISTNBQ3B726 338 aaPredicted RBP26.16■■□□□ 1.78
PDLIM4-206ENST00000474421 MAP1SQ66K74 1059 aaPredicted RBP26.16■■□□□ 1.78
PDLIM4-206ENST00000474421 CIAPIN1Q6FI81 312 aa26.16■■□□□ 1.78
PDLIM4-206ENST00000474421 KSR2Q6VAB6 950 aa26.16■■□□□ 1.78
PDLIM4-206ENST00000474421 NSFL1CQ9UNZ2 370 aaKnown RBP26.16■■□□□ 1.78
PDLIM4-206ENST00000474421 MAP3K2Q9Y2U5 619 aa26.16■■□□□ 1.78
PDLIM4-206ENST00000474421 CCDC152Q4G0S7 254 aa26.15■■□□□ 1.78
PDLIM4-206ENST00000474421 GPRC5DQ9NZD1 345 aa26.15■■□□□ 1.78
PDLIM4-206ENST00000474421 CDHR2Q9BYE9 1310 aa26.14■■□□□ 1.78
PDLIM4-206ENST00000474421 PDE8AO60658 829 aa26.14■■□□□ 1.78
PDLIM4-206ENST00000474421 NEXNQ0ZGT2 675 aa26.14■■□□□ 1.78
PDLIM4-206ENST00000474421 WASHC4Q2M389 1173 aa26.14■■□□□ 1.78
PDLIM4-206ENST00000474421 ADARB2Q9NS39 739 aaKnown RBP26.14■■□□□ 1.78
PDLIM4-206ENST00000474421 DUOX1Q9NRD9 1551 aa26.14■■□□□ 1.78
PDLIM4-206ENST00000474421 CACNA1FO60840 1977 aa26.13■■□□□ 1.77
PDLIM4-206ENST00000474421 PI4KAP2A4QPH2 592 aa26.13■■□□□ 1.77
PDLIM4-206ENST00000474421 WDR63Q8IWG1 891 aa26.13■■□□□ 1.77
PDLIM4-206ENST00000474421 PI4KAP1Q8N8J0 262 aa26.13■■□□□ 1.77
PDLIM4-206ENST00000474421 EYA3Q99504 573 aa26.13■■□□□ 1.77
PDLIM4-206ENST00000474421 MKRN1Q9UHC7 482 aaKnown RBP26.13■■□□□ 1.77
PDLIM4-206ENST00000474421 CNTNAP1P78357 1384 aa26.12■■□□□ 1.77
PDLIM4-206ENST00000474421 BCL2L13Q9BXK5 485 aa26.12■■□□□ 1.77
PDLIM4-206ENST00000474421 C6orf229H3BNL8 230 aa26.11■■□□□ 1.77
PDLIM4-206ENST00000474421 RAD17O75943 681 aa26.11■■□□□ 1.77
PDLIM4-206ENST00000474421 GMPSP49915 693 aaPredicted RBP26.11■■□□□ 1.77
PDLIM4-206ENST00000474421 SLC4A2P04920 1241 aa26.1■■□□□ 1.77
PDLIM4-206ENST00000474421 GPSM2P81274 684 aa26.1■■□□□ 1.77
PDLIM4-206ENST00000474421 HSPA1AP0DMV8 641 aaKnown RBP26.09■■□□□ 1.77
PDLIM4-206ENST00000474421 HSPA1BP0DMV9 641 aaKnown RBP26.09■■□□□ 1.77
PDLIM4-206ENST00000474421 SEC31BQ9NQW1 1179 aa26.09■■□□□ 1.77
PDLIM4-206ENST00000474421 POLLQ9UGP5 575 aa26.09■■□□□ 1.77
PDLIM4-206ENST00000474421 FANCIQ9NVI1 1328 aa26.09■■□□□ 1.77
PDLIM4-206ENST00000474421 YDJCA8MPS7 323 aa26.08■■□□□ 1.77
PDLIM4-206ENST00000474421 PODXL2Q9NZ53 605 aa26.08■■□□□ 1.77
PDLIM4-206ENST00000474421 COL4A1P02462 1669 aa26.07■■□□□ 1.76
PDLIM4-206ENST00000474421 IGKV5-2P06315 115 aa26.07■■□□□ 1.76
PDLIM4-206ENST00000474421 TBC1D16Q8TBP0 767 aa26.07■■□□□ 1.76
PDLIM4-206ENST00000474421 JARID2Q92833 1246 aaPredicted RBP26.07■■□□□ 1.76
PDLIM4-206ENST00000474421 MYH3P11055 1940 aa26.06■■□□□ 1.76
PDLIM4-206ENST00000474421 RIMBP2O15034 1052 aa26.06■■□□□ 1.76
PDLIM4-206ENST00000474421 ANKRD18AQ8IVF6 992 aa26.06■■□□□ 1.76
PDLIM4-206ENST00000474421 ANKIB1Q9P2G1 1089 aa26.06■■□□□ 1.76
PDLIM4-206ENST00000474421 SALL2Q9Y467 1007 aaPredicted RBP26.06■■□□□ 1.76
PDLIM4-206ENST00000474421 TRPM7Q96QT4 1865 aa26.05■■□□□ 1.76
PDLIM4-206ENST00000474421 H7C1D1 291 aa26.05■■□□□ 1.76
PDLIM4-206ENST00000474421 CTSWP56202 376 aa26.05■■□□□ 1.76
PDLIM4-206ENST00000474421 G2E3Q7L622 706 aa26.05■■□□□ 1.76
PDLIM4-206ENST00000474421 CDC5LQ99459 802 aaKnown RBP26.05■■□□□ 1.76
PDLIM4-206ENST00000474421 ZC3H12CQ9C0D7 883 aaKnown RBP26.05■■□□□ 1.76
PDLIM4-206ENST00000474421 DBNDD1Q9H9R9 158 aa26.05■■□□□ 1.76
PDLIM4-206ENST00000474421 RASSF10A6NK89 507 aa26.04■■□□□ 1.76
PDLIM4-206ENST00000474421 NEURL1BA8MQ27 555 aa26.04■■□□□ 1.76
PDLIM4-206ENST00000474421 FLIIQ13045 1269 aa26.04■■□□□ 1.76
PDLIM4-206ENST00000474421 ZC3H15Q8WU90 426 aaKnown RBP26.04■■□□□ 1.76
PDLIM4-206ENST00000474421 DPF2Q92785 391 aa26.04■■□□□ 1.76
PDLIM4-206ENST00000474421 CNOT7Q9UIV1 285 aaKnown RBP26.04■■□□□ 1.76
PDLIM4-206ENST00000474421 GGA1Q9UJY5 639 aa26.04■■□□□ 1.76
PDLIM4-206ENST00000474421 ECE2O60344 883 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms