RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 LTBP1Q14766 1721 aa13.19□□□□□ -0.3
VANGL1-205ENST00000474344 NBPF7P0C2Y1 421 aaPredicted RBP13.19□□□□□ -0.3
VANGL1-205ENST00000474344 HSP90B1P14625 803 aaKnown RBP13.19□□□□□ -0.3
VANGL1-205ENST00000474344 ALDH1B1P30837 517 aa13.19□□□□□ -0.3
VANGL1-205ENST00000474344 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
VANGL1-205ENST00000474344 FOXO4P98177 505 aa13.19□□□□□ -0.3
VANGL1-205ENST00000474344 GPR162Q16538 588 aa13.19□□□□□ -0.3
VANGL1-205ENST00000474344 ZKSCAN2Q63HK3 967 aa13.19□□□□□ -0.3
VANGL1-205ENST00000474344 PRPF40BQ6NWY9 871 aaKnown RBP13.19□□□□□ -0.3
VANGL1-205ENST00000474344 TTLL11Q8NHH1 800 aa13.19□□□□□ -0.3
VANGL1-205ENST00000474344 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
VANGL1-205ENST00000474344 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
VANGL1-205ENST00000474344 RTL9Q8NET4 1388 aa13.19□□□□□ -0.3
VANGL1-205ENST00000474344 RLBP1P12271 317 aa13.18□□□□□ -0.3
VANGL1-205ENST00000474344 CTSWP56202 376 aa13.18□□□□□ -0.3
VANGL1-205ENST00000474344 EPHA10Q5JZY3 1008 aa13.18□□□□□ -0.3
VANGL1-205ENST00000474344 FRAT1Q92837 279 aaPredicted RBP13.18□□□□□ -0.3
VANGL1-205ENST00000474344 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
VANGL1-205ENST00000474344 GRIN3BO60391 1043 aa13.17□□□□□ -0.3
VANGL1-205ENST00000474344 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
VANGL1-205ENST00000474344 SUCLG2Q96I99 432 aa13.17□□□□□ -0.3
VANGL1-205ENST00000474344 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
VANGL1-205ENST00000474344 BBOX1O75936 387 aa13.16□□□□□ -0.3
VANGL1-205ENST00000474344 GRAPQ13588 217 aa13.16□□□□□ -0.3
VANGL1-205ENST00000474344 SLC51AQ86UW1 340 aa13.16□□□□□ -0.3
VANGL1-205ENST00000474344 TMEM57Q8N5G2 664 aa13.16□□□□□ -0.3
VANGL1-205ENST00000474344 GRAPLQ8TC17 118 aaPredicted RBP13.16□□□□□ -0.3
VANGL1-205ENST00000474344 CLUAP1Q96AJ1 413 aa13.16□□□□□ -0.3
VANGL1-205ENST00000474344 SEC31BQ9NQW1 1179 aa13.16□□□□□ -0.3
VANGL1-205ENST00000474344 C21orf2O43822 256 aa13.15□□□□□ -0.3
VANGL1-205ENST00000474344 RABL6Q3YEC7 729 aaPredicted RBP13.15□□□□□ -0.3
VANGL1-205ENST00000474344 CCDC152Q4G0S7 254 aa13.15□□□□□ -0.3
VANGL1-205ENST00000474344 OLFM4Q6UX06 510 aa13.15□□□□□ -0.3
VANGL1-205ENST00000474344 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
VANGL1-205ENST00000474344 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
VANGL1-205ENST00000474344 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
VANGL1-205ENST00000474344 ANKRD44Q8N8A2 993 aa13.15□□□□□ -0.3
VANGL1-205ENST00000474344 CELF1Q92879 486 aaKnown RBP13.15□□□□□ -0.3
VANGL1-205ENST00000474344 GREM2Q9H772 168 aa13.15□□□□□ -0.3
VANGL1-205ENST00000474344 NFKBIEO00221 500 aa13.14□□□□□ -0.31
VANGL1-205ENST00000474344 PLIN1O60240 522 aa13.14□□□□□ -0.31
VANGL1-205ENST00000474344 PRELPP51888 382 aa13.14□□□□□ -0.31
VANGL1-205ENST00000474344 RPS8P62241 208 aaKnown RBP13.14□□□□□ -0.31
VANGL1-205ENST00000474344 MEIS3Q99687 375 aa13.14□□□□□ -0.31
VANGL1-205ENST00000474344 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
VANGL1-205ENST00000474344 LTBP3Q9NS15 1303 aa13.13□□□□□ -0.31
VANGL1-205ENST00000474344 DUOX1Q9NRD9 1551 aa13.13□□□□□ -0.31
VANGL1-205ENST00000474344 CC2D2BQ6DHV5 1058 aa13.13□□□□□ -0.31
VANGL1-205ENST00000474344 LMBR1LQ6UX01 489 aa13.13□□□□□ -0.31
VANGL1-205ENST00000474344 TMC4Q7Z404 712 aa13.13□□□□□ -0.31
VANGL1-205ENST00000474344 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
VANGL1-205ENST00000474344 PANK1Q8TE04 598 aa13.13□□□□□ -0.31
VANGL1-205ENST00000474344 BICC1Q9H694 974 aaKnown RBP13.13□□□□□ -0.31
VANGL1-205ENST00000474344 DCAF8L1A6NGE4 600 aa13.12□□□□□ -0.31
VANGL1-205ENST00000474344 PPEF1O14829 653 aaPredicted RBP13.12□□□□□ -0.31
VANGL1-205ENST00000474344 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
VANGL1-205ENST00000474344 PDE3AQ14432 1141 aa13.12□□□□□ -0.31
VANGL1-205ENST00000474344 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
VANGL1-205ENST00000474344 SOGA3Q5TF21 947 aa13.12□□□□□ -0.31
VANGL1-205ENST00000474344 ARHGAP27Q6ZUM4 889 aa13.12□□□□□ -0.31
VANGL1-205ENST00000474344 CCDC85AQ96PX6 553 aaPredicted RBP13.12□□□□□ -0.31
VANGL1-205ENST00000474344 TIAM2Q8IVF5 1701 aa13.11□□□□□ -0.31
VANGL1-205ENST00000474344 GNAI3P08754 354 aa13.11□□□□□ -0.31
VANGL1-205ENST00000474344 ITGA6P23229 1130 aa13.11□□□□□ -0.31
VANGL1-205ENST00000474344 GRIPAP1Q4V328 841 aa13.11□□□□□ -0.31
VANGL1-205ENST00000474344 CCDC93Q567U6 631 aa13.11□□□□□ -0.31
VANGL1-205ENST00000474344 C20orf194Q5TEA3 1177 aa13.11□□□□□ -0.31
VANGL1-205ENST00000474344 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
VANGL1-205ENST00000474344 PSME4Q14997 1843 aa13.11□□□□□ -0.31
VANGL1-205ENST00000474344 UBTFL1P0CB47 393 aaPredicted RBP13.1□□□□□ -0.31
VANGL1-205ENST00000474344 MS4A1P11836 297 aa13.1□□□□□ -0.31
VANGL1-205ENST00000474344 FTSJ3Q8IY81 847 aaKnown RBP13.1□□□□□ -0.31
VANGL1-205ENST00000474344 RTKN2Q8IZC4 609 aa13.1□□□□□ -0.31
VANGL1-205ENST00000474344 CDC5LQ99459 802 aaKnown RBP13.1□□□□□ -0.31
VANGL1-205ENST00000474344 PSMD1Q99460 953 aa13.1□□□□□ -0.31
VANGL1-205ENST00000474344 RTFDC1Q9BY42 306 aaPredicted RBP13.1□□□□□ -0.31
VANGL1-205ENST00000474344 BSDC1Q9NW68 430 aaPredicted RBP13.1□□□□□ -0.31
VANGL1-205ENST00000474344 SCN9AQ15858 1988 aa13.1□□□□□ -0.31
VANGL1-205ENST00000474344 COL4A5P29400 1685 aa13.09□□□□□ -0.31
VANGL1-205ENST00000474344 RFX5P48382 616 aaPredicted RBP13.09□□□□□ -0.31
VANGL1-205ENST00000474344 FKBP4Q02790 459 aaKnown RBP eCLIP13.09□□□□□ -0.31
VANGL1-205ENST00000474344 RASSF7Q02833 373 aa13.09□□□□□ -0.31
VANGL1-205ENST00000474344 MTX1Q13505 466 aa13.09□□□□□ -0.31
VANGL1-205ENST00000474344 ANKRD18AQ8IVF6 992 aa13.09□□□□□ -0.31
VANGL1-205ENST00000474344 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
VANGL1-205ENST00000474344 LRRFIP2Q9Y608 721 aaKnown RBP13.09□□□□□ -0.31
VANGL1-205ENST00000474344 ZNF646O15015 1829 aaPredicted RBP13.09□□□□□ -0.31
VANGL1-205ENST00000474344 ANKRD18BA2A2Z9 1011 aa13.08□□□□□ -0.32
VANGL1-205ENST00000474344 RRP1P56182 461 aaKnown RBP13.08□□□□□ -0.32
VANGL1-205ENST00000474344 IFIT5Q13325 482 aaKnown RBP13.08□□□□□ -0.32
VANGL1-205ENST00000474344 MVPQ14764 893 aaKnown RBP13.08□□□□□ -0.32
VANGL1-205ENST00000474344 MINPP1Q9UNW1 487 aa13.08□□□□□ -0.32
VANGL1-205ENST00000474344 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
VANGL1-205ENST00000474344 LMNB1P20700 586 aa13.07□□□□□ -0.32
VANGL1-205ENST00000474344 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
VANGL1-205ENST00000474344 ITPRIPQ8IWB1 547 aa13.07□□□□□ -0.32
VANGL1-205ENST00000474344 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
VANGL1-205ENST00000474344 ZNF594Q96JF6 807 aaPredicted RBP13.07□□□□□ -0.32
VANGL1-205ENST00000474344 TAOK3Q9H2K8 898 aa13.07□□□□□ -0.32
VANGL1-205ENST00000474344 COG6Q9Y2V7 657 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms