RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 CHADLQ6NUI6 762 aa23.2■■□□□ 1.3
SNX4-204ENST00000473417 GPC2Q8N158 579 aa23.2■■□□□ 1.3
SNX4-204ENST00000473417 ZNF428Q96B54 188 aa23.2■■□□□ 1.3
SNX4-204ENST00000473417 BBOX1O75936 387 aa23.19■■□□□ 1.3
SNX4-204ENST00000473417 GRAPQ13588 217 aa23.19■■□□□ 1.3
SNX4-204ENST00000473417 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
SNX4-204ENST00000473417 GRAPLQ8TC17 118 aaPredicted RBP23.19■■□□□ 1.3
SNX4-204ENST00000473417 FAM89AQ96GI7 184 aa23.19■■□□□ 1.3
SNX4-204ENST00000473417 TMX4Q9H1E5 349 aaPredicted RBP23.19■■□□□ 1.3
SNX4-204ENST00000473417 CCDC30Q5VVM6 783 aa23.18■■□□□ 1.3
SNX4-204ENST00000473417 RIC3Q7Z5B4 369 aa23.18■■□□□ 1.3
SNX4-204ENST00000473417 SP8Q8IXZ3 490 aa23.18■■□□□ 1.3
SNX4-204ENST00000473417 LARGE2Q8N3Y3 721 aa23.18■■□□□ 1.3
SNX4-204ENST00000473417 RTFDC1Q9BY42 306 aaPredicted RBP23.18■■□□□ 1.3
SNX4-204ENST00000473417 HACL1Q9UJ83 578 aa23.18■■□□□ 1.3
SNX4-204ENST00000473417 EIF6P56537 245 aaKnown RBP23.17■■□□□ 1.3
SNX4-204ENST00000473417 LDHDQ86WU2 507 aa23.17■■□□□ 1.3
SNX4-204ENST00000473417 CDCA7LQ96GN5 454 aa23.17■■□□□ 1.3
SNX4-204ENST00000473417 CHMP4AQ9BY43 222 aa23.17■■□□□ 1.3
SNX4-204ENST00000473417 VPS33BQ9H267 617 aa23.17■■□□□ 1.3
SNX4-204ENST00000473417 E9PSI1 815 aa23.15■■□□□ 1.3
SNX4-204ENST00000473417 PPIP5K2O43314 1243 aa23.15■■□□□ 1.3
SNX4-204ENST00000473417 EPHX2P34913 555 aa23.15■■□□□ 1.3
SNX4-204ENST00000473417 HNRNPUQ00839 825 aaKnown RBP eCLIP23.15■■□□□ 1.3
SNX4-204ENST00000473417 SLFN5Q08AF3 891 aa23.15■■□□□ 1.3
SNX4-204ENST00000473417 SF3B3Q15393 1217 aaKnown RBP23.15■■□□□ 1.3
SNX4-204ENST00000473417 AOC3Q16853 763 aa23.15■■□□□ 1.3
SNX4-204ENST00000473417 TMC4Q7Z404 712 aa23.15■■□□□ 1.3
SNX4-204ENST00000473417 SUPT20HQ8NEM7 779 aa23.15■■□□□ 1.3
SNX4-204ENST00000473417 VAMP4O75379 141 aa23.14■■□□□ 1.29
SNX4-204ENST00000473417 DPP8Q6V1X1 898 aaPredicted RBP23.14■■□□□ 1.29
SNX4-204ENST00000473417 NIM1KQ8IY84 436 aa23.14■■□□□ 1.29
SNX4-204ENST00000473417 SPEF2Q9C093 1822 aa23.14■■□□□ 1.29
SNX4-204ENST00000473417 RTL5Q5HYW3 569 aaPredicted RBP23.13■■□□□ 1.29
SNX4-204ENST00000473417 MPNDQ8N594 471 aa23.13■■□□□ 1.29
SNX4-204ENST00000473417 MYD88Q99836 296 aa23.13■■□□□ 1.29
SNX4-204ENST00000473417 STK31Q9BXU1 1019 aa23.13■■□□□ 1.29
SNX4-204ENST00000473417 GJA3Q9Y6H8 435 aa23.13■■□□□ 1.29
SNX4-204ENST00000473417 PASKQ96RG2 1323 aa23.12■■□□□ 1.29
SNX4-204ENST00000473417 IRS4O14654 1257 aaPredicted RBP23.12■■□□□ 1.29
SNX4-204ENST00000473417 EAPPQ56P03 285 aaPredicted RBP23.12■■□□□ 1.29
SNX4-204ENST00000473417 ZBTB38Q8NAP3 1195 aaPredicted RBP23.12■■□□□ 1.29
SNX4-204ENST00000473417 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
SNX4-204ENST00000473417 TRPM7Q96QT4 1865 aa23.11■■□□□ 1.29
SNX4-204ENST00000473417 DDX58O95786 925 aaKnown RBP23.11■■□□□ 1.29
SNX4-204ENST00000473417 PNMA8AQ86V59 439 aaPredicted RBP23.11■■□□□ 1.29
SNX4-204ENST00000473417 CELF1Q92879 486 aaKnown RBP23.11■■□□□ 1.29
SNX4-204ENST00000473417 SCNN1DP51172 638 aa23.1■■□□□ 1.29
SNX4-204ENST00000473417 KIAA2012Q0VF49 1180 aa23.1■■□□□ 1.29
SNX4-204ENST00000473417 METTL22Q9BUU2 404 aaPredicted RBP23.1■■□□□ 1.29
SNX4-204ENST00000473417 SLC4A2P04920 1241 aa23.09■■□□□ 1.29
SNX4-204ENST00000473417 PCCAP05165 728 aaPredicted RBP23.09■■□□□ 1.29
SNX4-204ENST00000473417 CREBZFQ9NS37 354 aa23.09■■□□□ 1.29
SNX4-204ENST00000473417 ZNRF3Q9ULT6 936 aa23.09■■□□□ 1.29
SNX4-204ENST00000473417 PSME4Q14997 1843 aa23.08■■□□□ 1.29
SNX4-204ENST00000473417 ITGBL1O95965 494 aaPredicted RBP23.08■■□□□ 1.29
SNX4-204ENST00000473417 LMOD1P29536 600 aaPredicted RBP23.08■■□□□ 1.29
SNX4-204ENST00000473417 CWC25Q9NXE8 425 aaPredicted RBP23.08■■□□□ 1.29
SNX4-204ENST00000473417 HSP90B1P14625 803 aaKnown RBP23.07■■□□□ 1.28
SNX4-204ENST00000473417 G2E3Q7L622 706 aa23.07■■□□□ 1.28
SNX4-204ENST00000473417 MAP3K2Q9Y2U5 619 aa23.07■■□□□ 1.28
SNX4-204ENST00000473417 CXCL9Q07325 125 aa23.06■■□□□ 1.28
SNX4-204ENST00000473417 KSR2Q6VAB6 950 aa23.06■■□□□ 1.28
SNX4-204ENST00000473417 TRMT2AQ8IZ69 625 aaKnown RBP23.06■■□□□ 1.28
SNX4-204ENST00000473417 CLEC11AQ9Y240 323 aa23.06■■□□□ 1.28
SNX4-204ENST00000473417 PI4KAP2A4QPH2 592 aa23.05■■□□□ 1.28
SNX4-204ENST00000473417 EPS15P42566 896 aa23.05■■□□□ 1.28
SNX4-204ENST00000473417 PI4KAP1Q8N8J0 262 aa23.05■■□□□ 1.28
SNX4-204ENST00000473417 SCN9AQ15858 1988 aa23.05■■□□□ 1.28
SNX4-204ENST00000473417 CDHR2Q9BYE9 1310 aa23.05■■□□□ 1.28
SNX4-204ENST00000473417 PDE8AO60658 829 aa23.04■■□□□ 1.28
SNX4-204ENST00000473417 IGKV5-2P06315 115 aa23.04■■□□□ 1.28
SNX4-204ENST00000473417 RPS8P62241 208 aaKnown RBP23.03■■□□□ 1.28
SNX4-204ENST00000473417 MAP1SQ66K74 1059 aaPredicted RBP23.03■■□□□ 1.28
SNX4-204ENST00000473417 SEC31BQ9NQW1 1179 aa23.03■■□□□ 1.28
SNX4-204ENST00000473417 GPRC5DQ9NZD1 345 aa23.03■■□□□ 1.28
SNX4-204ENST00000473417 NSFL1CQ9UNZ2 370 aaKnown RBP23.03■■□□□ 1.28
SNX4-204ENST00000473417 GPSM2P81274 684 aa23.02■■□□□ 1.28
SNX4-204ENST00000473417 CCDC152Q4G0S7 254 aa23.02■■□□□ 1.28
SNX4-204ENST00000473417 CIAPIN1Q6FI81 312 aa23.02■■□□□ 1.28
SNX4-204ENST00000473417 USP50Q70EL3 339 aaPredicted RBP23.02■■□□□ 1.28
SNX4-204ENST00000473417 CNTROBQ8N137 903 aa23.02■■□□□ 1.28
SNX4-204ENST00000473417 JARID2Q92833 1246 aaPredicted RBP23.02■■□□□ 1.28
SNX4-204ENST00000473417 YDJCA8MPS7 323 aa23.01■■□□□ 1.27
SNX4-204ENST00000473417 NEXNQ0ZGT2 675 aa23.01■■□□□ 1.27
SNX4-204ENST00000473417 FLIIQ13045 1269 aa23.01■■□□□ 1.27
SNX4-204ENST00000473417 WASHC4Q2M389 1173 aa23.01■■□□□ 1.27
SNX4-204ENST00000473417 POLLQ9UGP5 575 aa23.01■■□□□ 1.27
SNX4-204ENST00000473417 CNTNAP1P78357 1384 aa23.01■■□□□ 1.27
SNX4-204ENST00000473417 TMEM88BA6NKF7 163 aa23■■□□□ 1.27
SNX4-204ENST00000473417 RAD17O75943 681 aa23■■□□□ 1.27
SNX4-204ENST00000473417 GMPSP49915 693 aaPredicted RBP23■■□□□ 1.27
SNX4-204ENST00000473417 TNIP1Q15025 636 aa23■■□□□ 1.27
SNX4-204ENST00000473417 ADARB2Q9NS39 739 aaKnown RBP23■■□□□ 1.27
SNX4-204ENST00000473417 MKRN1Q9UHC7 482 aaKnown RBP23■■□□□ 1.27
SNX4-204ENST00000473417 NEURL1BA8MQ27 555 aa22.99■■□□□ 1.27
SNX4-204ENST00000473417 HSPA1AP0DMV8 641 aaKnown RBP22.99■■□□□ 1.27
SNX4-204ENST00000473417 HSPA1BP0DMV9 641 aaKnown RBP22.99■■□□□ 1.27
SNX4-204ENST00000473417 FKBP5Q13451 457 aaPredicted RBP22.99■■□□□ 1.27
SNX4-204ENST00000473417 CWF19L2Q2TBE0 894 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms