RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 RIC3Q7Z5B4 369 aa19.78■□□□□ 0.76
VTI1A-203ENST00000472892 CREBZFQ9NS37 354 aa19.78■□□□□ 0.76
VTI1A-203ENST00000472892 PASKQ96RG2 1323 aa19.77■□□□□ 0.76
VTI1A-203ENST00000472892 PPIP5K2O43314 1243 aa19.77■□□□□ 0.76
VTI1A-203ENST00000472892 ITGBL1O95965 494 aaPredicted RBP19.77■□□□□ 0.76
VTI1A-203ENST00000472892 GOLGA2Q08379 1002 aa19.77■□□□□ 0.76
VTI1A-203ENST00000472892 AOC3Q16853 763 aa19.77■□□□□ 0.76
VTI1A-203ENST00000472892 EAPPQ56P03 285 aaPredicted RBP19.77■□□□□ 0.76
VTI1A-203ENST00000472892 DPP8Q6V1X1 898 aaPredicted RBP19.77■□□□□ 0.76
VTI1A-203ENST00000472892 TMC4Q7Z404 712 aa19.77■□□□□ 0.76
VTI1A-203ENST00000472892 NIM1KQ8IY84 436 aa19.77■□□□□ 0.76
VTI1A-203ENST00000472892 MPNDQ8N594 471 aa19.77■□□□□ 0.76
VTI1A-203ENST00000472892 GJA3Q9Y6H8 435 aa19.77■□□□□ 0.76
VTI1A-203ENST00000472892 LAMB2P55268 1798 aa19.77■□□□□ 0.76
VTI1A-203ENST00000472892 ZNF316A6NFI3 1004 aaPredicted RBP19.76■□□□□ 0.75
VTI1A-203ENST00000472892 IFFO2Q5TF58 517 aa19.76■□□□□ 0.75
VTI1A-203ENST00000472892 CCDC30Q5VVM6 783 aa19.76■□□□□ 0.75
VTI1A-203ENST00000472892 WWC1Q8IX03 1113 aa19.76■□□□□ 0.75
VTI1A-203ENST00000472892 TSPYL6Q8N831 410 aa19.76■□□□□ 0.75
VTI1A-203ENST00000472892 ZNRF3Q9ULT6 936 aa19.75■□□□□ 0.75
VTI1A-203ENST00000472892 CLEC11AQ9Y240 323 aa19.75■□□□□ 0.75
VTI1A-203ENST00000472892 IRS4O14654 1257 aaPredicted RBP19.74■□□□□ 0.75
VTI1A-203ENST00000472892 SCNN1DP51172 638 aa19.74■□□□□ 0.75
VTI1A-203ENST00000472892 KIAA2012Q0VF49 1180 aa19.74■□□□□ 0.75
VTI1A-203ENST00000472892 RTL5Q5HYW3 569 aaPredicted RBP19.74■□□□□ 0.75
VTI1A-203ENST00000472892 ZBTB38Q8NAP3 1195 aaPredicted RBP19.74■□□□□ 0.75
VTI1A-203ENST00000472892 ADAMTSL1Q8N6G6 1762 aa19.73■□□□□ 0.75
VTI1A-203ENST00000472892 LMOD1P29536 600 aaPredicted RBP19.73■□□□□ 0.75
VTI1A-203ENST00000472892 CXCL9Q07325 125 aa19.73■□□□□ 0.75
VTI1A-203ENST00000472892 CCDC191Q8NCU4 936 aa19.73■□□□□ 0.75
VTI1A-203ENST00000472892 CELF1Q92879 486 aaKnown RBP19.73■□□□□ 0.75
VTI1A-203ENST00000472892 TSR2Q969E8 191 aaKnown RBP19.73■□□□□ 0.75
VTI1A-203ENST00000472892 MYD88Q99836 296 aa19.73■□□□□ 0.75
VTI1A-203ENST00000472892 DDX60Q8IY21 1712 aaKnown RBP19.73■□□□□ 0.75
VTI1A-203ENST00000472892 ANP32CO43423 234 aa19.72■□□□□ 0.75
VTI1A-203ENST00000472892 DDX58O95786 925 aaKnown RBP19.72■□□□□ 0.75
VTI1A-203ENST00000472892 EPS15P42566 896 aa19.72■□□□□ 0.75
VTI1A-203ENST00000472892 CNTROBQ8N137 903 aa19.72■□□□□ 0.75
VTI1A-203ENST00000472892 METTL22Q9BUU2 404 aaPredicted RBP19.72■□□□□ 0.75
VTI1A-203ENST00000472892 MRS2Q9HD23 443 aa19.72■□□□□ 0.75
VTI1A-203ENST00000472892 PCNTO95613 3336 aa19.72■□□□□ 0.75
VTI1A-203ENST00000472892 IL16Q14005 1332 aa19.72■□□□□ 0.75
VTI1A-203ENST00000472892 HSP90B1P14625 803 aaKnown RBP19.71■□□□□ 0.75
VTI1A-203ENST00000472892 MAP1SQ66K74 1059 aaPredicted RBP19.71■□□□□ 0.75
VTI1A-203ENST00000472892 PCCAP05165 728 aaPredicted RBP19.7■□□□□ 0.74
VTI1A-203ENST00000472892 RPS8P62241 208 aaKnown RBP19.7■□□□□ 0.74
VTI1A-203ENST00000472892 USP50Q70EL3 339 aaPredicted RBP19.7■□□□□ 0.74
VTI1A-203ENST00000472892 CWC25Q9NXE8 425 aaPredicted RBP19.7■□□□□ 0.74
VTI1A-203ENST00000472892 TAF1P21675 1872 aa19.7■□□□□ 0.74
VTI1A-203ENST00000472892 LTBP1Q14766 1721 aa19.7■□□□□ 0.74
VTI1A-203ENST00000472892 TMEM88BA6NKF7 163 aa19.69■□□□□ 0.74
VTI1A-203ENST00000472892 KSR2Q6VAB6 950 aa19.69■□□□□ 0.74
VTI1A-203ENST00000472892 GPRC5DQ9NZD1 345 aa19.69■□□□□ 0.74
VTI1A-203ENST00000472892 NSFL1CQ9UNZ2 370 aaKnown RBP19.69■□□□□ 0.74
VTI1A-203ENST00000472892 MAP3K2Q9Y2U5 619 aa19.69■□□□□ 0.74
VTI1A-203ENST00000472892 TWISTNBQ3B726 338 aaPredicted RBP19.68■□□□□ 0.74
VTI1A-203ENST00000472892 CIAPIN1Q6FI81 312 aa19.68■□□□□ 0.74
VTI1A-203ENST00000472892 MKRN1Q9UHC7 482 aaKnown RBP19.68■□□□□ 0.74
VTI1A-203ENST00000472892 PI4KAP2A4QPH2 592 aa19.67■□□□□ 0.74
VTI1A-203ENST00000472892 GPSM2P81274 684 aa19.67■□□□□ 0.74
VTI1A-203ENST00000472892 TNIP1Q15025 636 aa19.67■□□□□ 0.74
VTI1A-203ENST00000472892 WASHC4Q2M389 1173 aa19.67■□□□□ 0.74
VTI1A-203ENST00000472892 PI4KAP1Q8N8J0 262 aa19.67■□□□□ 0.74
VTI1A-203ENST00000472892 STK31Q9BXU1 1019 aa19.67■□□□□ 0.74
VTI1A-203ENST00000472892 POLLQ9UGP5 575 aa19.67■□□□□ 0.74
VTI1A-203ENST00000472892 LRRC37AA6NMS7 1700 aa19.67■□□□□ 0.74
VTI1A-203ENST00000472892 DUOX1Q9NRD9 1551 aa19.66■□□□□ 0.74
VTI1A-203ENST00000472892 YDJCA8MPS7 323 aa19.66■□□□□ 0.74
VTI1A-203ENST00000472892 PDE8AO60658 829 aa19.66■□□□□ 0.74
VTI1A-203ENST00000472892 RAD17O75943 681 aa19.66■□□□□ 0.74
VTI1A-203ENST00000472892 GMPSP49915 693 aaPredicted RBP19.66■□□□□ 0.74
VTI1A-203ENST00000472892 WDR63Q8IWG1 891 aa19.66■□□□□ 0.74
VTI1A-203ENST00000472892 JARID2Q92833 1246 aaPredicted RBP19.66■□□□□ 0.74
VTI1A-203ENST00000472892 SEC31BQ9NQW1 1179 aa19.66■□□□□ 0.74
VTI1A-203ENST00000472892 ADARB2Q9NS39 739 aaKnown RBP19.66■□□□□ 0.74
VTI1A-203ENST00000472892 CNTNAP1P78357 1384 aa19.66■□□□□ 0.74
VTI1A-203ENST00000472892 COL4A1P02462 1669 aa19.65■□□□□ 0.74
VTI1A-203ENST00000472892 SLC4A2P04920 1241 aa19.65■□□□□ 0.74
VTI1A-203ENST00000472892 IGKV5-2P06315 115 aa19.65■□□□□ 0.74
VTI1A-203ENST00000472892 C1QBPQ07021 282 aaKnown RBP19.65■□□□□ 0.74
VTI1A-203ENST00000472892 CCDC152Q4G0S7 254 aa19.65■□□□□ 0.74
VTI1A-203ENST00000472892 C6orf229H3BNL8 230 aa19.64■□□□□ 0.73
VTI1A-203ENST00000472892 HSPA1AP0DMV8 641 aaKnown RBP19.64■□□□□ 0.73
VTI1A-203ENST00000472892 HSPA1BP0DMV9 641 aaKnown RBP19.64■□□□□ 0.73
VTI1A-203ENST00000472892 G2E3Q7L622 706 aa19.64■□□□□ 0.73
VTI1A-203ENST00000472892 TBC1D16Q8TBP0 767 aa19.64■□□□□ 0.73
VTI1A-203ENST00000472892 PODXL2Q9NZ53 605 aa19.64■□□□□ 0.73
VTI1A-203ENST00000472892 CDHR2Q9BYE9 1310 aa19.64■□□□□ 0.73
VTI1A-203ENST00000472892 COL13A1Q5TAT6 717 aaPredicted RBP19.63■□□□□ 0.73
VTI1A-203ENST00000472892 EYA3Q99504 573 aa19.63■□□□□ 0.73
VTI1A-203ENST00000472892 BCL2L13Q9BXK5 485 aa19.63■□□□□ 0.73
VTI1A-203ENST00000472892 PGAP2Q9UHJ9 254 aa19.63■□□□□ 0.73
VTI1A-203ENST00000472892 FANCIQ9NVI1 1328 aa19.62■□□□□ 0.73
VTI1A-203ENST00000472892 RIMBP2O15034 1052 aa19.62■□□□□ 0.73
VTI1A-203ENST00000472892 NEXNQ0ZGT2 675 aa19.62■□□□□ 0.73
VTI1A-203ENST00000472892 SALL2Q9Y467 1007 aaPredicted RBP19.62■□□□□ 0.73
VTI1A-203ENST00000472892 RASSF10A6NK89 507 aa19.61■□□□□ 0.73
VTI1A-203ENST00000472892 VAMP4O75379 141 aa19.61■□□□□ 0.73
VTI1A-203ENST00000472892 VEGFBP49765 207 aa19.61■□□□□ 0.73
VTI1A-203ENST00000472892 DPF2Q92785 391 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms