RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 JDP2Q8WYK2 163 aa21.79■■□□□ 1.08
COMMD3-210ENST00000472610 VPS33BQ9H267 617 aa21.79■■□□□ 1.08
COMMD3-210ENST00000472610 WDR90Q96KV7 1748 aa21.79■■□□□ 1.08
COMMD3-210ENST00000472610 E9PSI1 815 aa21.78■■□□□ 1.08
COMMD3-210ENST00000472610 PDE8AO60658 829 aa21.78■■□□□ 1.08
COMMD3-210ENST00000472610 IGKV5-2P06315 115 aa21.78■■□□□ 1.08
COMMD3-210ENST00000472610 SUPT20HQ8NEM7 779 aa21.78■■□□□ 1.08
COMMD3-210ENST00000472610 CDHR2Q9BYE9 1310 aa21.78■■□□□ 1.08
COMMD3-210ENST00000472610 TAF1P21675 1872 aa21.77■■□□□ 1.08
COMMD3-210ENST00000472610 MPNDQ8N594 471 aa21.77■■□□□ 1.08
COMMD3-210ENST00000472610 DNAAF4Q8WXU2 420 aa21.77■■□□□ 1.08
COMMD3-210ENST00000472610 NEURL1BA8MQ27 555 aa21.76■■□□□ 1.07
COMMD3-210ENST00000472610 RTFDC1Q9BY42 306 aaPredicted RBP21.76■■□□□ 1.07
COMMD3-210ENST00000472610 FZD9O00144 591 aa21.75■■□□□ 1.07
COMMD3-210ENST00000472610 DDNO94850 711 aaPredicted RBP21.75■■□□□ 1.07
COMMD3-210ENST00000472610 CCDC152Q4G0S7 254 aa21.75■■□□□ 1.07
COMMD3-210ENST00000472610 DIEXFQ68CQ4 756 aaKnown RBP21.75■■□□□ 1.07
COMMD3-210ENST00000472610 DPP8Q6V1X1 898 aaPredicted RBP21.75■■□□□ 1.07
COMMD3-210ENST00000472610 LARGE2Q8N3Y3 721 aa21.75■■□□□ 1.07
COMMD3-210ENST00000472610 HSPA6P17066 643 aa21.74■■□□□ 1.07
COMMD3-210ENST00000472610 RPS8P62241 208 aaKnown RBP21.74■■□□□ 1.07
COMMD3-210ENST00000472610 FSTL1Q12841 308 aa21.74■■□□□ 1.07
COMMD3-210ENST00000472610 CWF19L2Q2TBE0 894 aaKnown RBP21.74■■□□□ 1.07
COMMD3-210ENST00000472610 LINS1Q8NG48 757 aa21.74■■□□□ 1.07
COMMD3-210ENST00000472610 CELF1Q92879 486 aaKnown RBP21.74■■□□□ 1.07
COMMD3-210ENST00000472610 POTECB2RU33 542 aa21.73■■□□□ 1.07
COMMD3-210ENST00000472610 EIF6P56537 245 aaKnown RBP21.73■■□□□ 1.07
COMMD3-210ENST00000472610 SLFN5Q08AF3 891 aa21.73■■□□□ 1.07
COMMD3-210ENST00000472610 JARID2Q92833 1246 aaPredicted RBP21.73■■□□□ 1.07
COMMD3-210ENST00000472610 LRRC37AA6NMS7 1700 aa21.72■■□□□ 1.07
COMMD3-210ENST00000472610 IQCA1LA6NCM1 817 aa21.72■■□□□ 1.07
COMMD3-210ENST00000472610 H7C1W4 665 aa21.72■■□□□ 1.07
COMMD3-210ENST00000472610 PPIP5K2O43314 1243 aa21.72■■□□□ 1.07
COMMD3-210ENST00000472610 GCKRQ14397 625 aa21.72■■□□□ 1.07
COMMD3-210ENST00000472610 SLC51AQ86UW1 340 aa21.72■■□□□ 1.07
COMMD3-210ENST00000472610 L3MBTL3Q96JM7 780 aaPredicted RBP21.72■■□□□ 1.07
COMMD3-210ENST00000472610 SCN4AP35499 1836 aa21.71■■□□□ 1.07
COMMD3-210ENST00000472610 MYH3P11055 1940 aa21.71■■□□□ 1.07
COMMD3-210ENST00000472610 NIM1KQ8IY84 436 aa21.71■■□□□ 1.07
COMMD3-210ENST00000472610 SMC1BQ8NDV3 1235 aa21.71■■□□□ 1.07
COMMD3-210ENST00000472610 ZNF541Q9H0D2 1346 aa21.71■■□□□ 1.07
COMMD3-210ENST00000472610 GPC2Q8N158 579 aa21.7■■□□□ 1.06
COMMD3-210ENST00000472610 CTSWP56202 376 aa21.69■■□□□ 1.06
COMMD3-210ENST00000472610 AOC3Q16853 763 aa21.69■■□□□ 1.06
COMMD3-210ENST00000472610 UBE3BQ7Z3V4 1068 aa21.69■■□□□ 1.06
COMMD3-210ENST00000472610 SEC31BQ9NQW1 1179 aa21.69■■□□□ 1.06
COMMD3-210ENST00000472610 NSFL1CQ9UNZ2 370 aaKnown RBP21.69■■□□□ 1.06
COMMD3-210ENST00000472610 KIAA2012Q0VF49 1180 aa21.68■■□□□ 1.06
COMMD3-210ENST00000472610 TTLL11Q8NHH1 800 aa21.68■■□□□ 1.06
COMMD3-210ENST00000472610 COL4A5P29400 1685 aa21.68■■□□□ 1.06
COMMD3-210ENST00000472610 F6X3S4 739 aa21.67■■□□□ 1.06
COMMD3-210ENST00000472610 BEND3Q5T5X7 828 aa21.67■■□□□ 1.06
COMMD3-210ENST00000472610 ANKRD18AQ8IVF6 992 aa21.67■■□□□ 1.06
COMMD3-210ENST00000472610 TRMT2AQ8IZ69 625 aaKnown RBP21.67■■□□□ 1.06
COMMD3-210ENST00000472610 MIER1Q8N108 512 aa21.67■■□□□ 1.06
COMMD3-210ENST00000472610 CDC5LQ99459 802 aaKnown RBP21.67■■□□□ 1.06
COMMD3-210ENST00000472610 PLA2G12BQ9BX93 195 aa21.67■■□□□ 1.06
COMMD3-210ENST00000472610 ZNRF3Q9ULT6 936 aa21.67■■□□□ 1.06
COMMD3-210ENST00000472610 RTL9Q8NET4 1388 aa21.66■■□□□ 1.06
COMMD3-210ENST00000472610 APLP1P51693 650 aa21.66■■□□□ 1.06
COMMD3-210ENST00000472610 CDCA7LQ96GN5 454 aa21.66■■□□□ 1.06
COMMD3-210ENST00000472610 CCDC85AQ96PX6 553 aaPredicted RBP21.66■■□□□ 1.06
COMMD3-210ENST00000472610 HACL1Q9UJ83 578 aa21.66■■□□□ 1.06
COMMD3-210ENST00000472610 CASP7P55210 303 aa21.65■■□□□ 1.06
COMMD3-210ENST00000472610 GPSM2P81274 684 aa21.65■■□□□ 1.06
COMMD3-210ENST00000472610 WASHC4Q2M389 1173 aa21.65■■□□□ 1.06
COMMD3-210ENST00000472610 EYA3Q99504 573 aa21.65■■□□□ 1.06
COMMD3-210ENST00000472610 PODXL2Q9NZ53 605 aa21.65■■□□□ 1.06
COMMD3-210ENST00000472610 GJA3Q9Y6H8 435 aa21.65■■□□□ 1.06
COMMD3-210ENST00000472610 COL4A1P02462 1669 aa21.65■■□□□ 1.06
COMMD3-210ENST00000472610 C6orf229H3BNL8 230 aa21.64■■□□□ 1.05
COMMD3-210ENST00000472610 CT47B1P0C2W7 299 aaPredicted RBP21.64■■□□□ 1.05
COMMD3-210ENST00000472610 MRPL50Q8N5N7 158 aaKnown RBP21.64■■□□□ 1.05
COMMD3-210ENST00000472610 TAF1DQ9H5J8 278 aaPredicted RBP21.64■■□□□ 1.05
COMMD3-210ENST00000472610 DUOX1Q9NRD9 1551 aa21.64■■□□□ 1.05
COMMD3-210ENST00000472610 ALDH1L1O75891 902 aa21.63■■□□□ 1.05
COMMD3-210ENST00000472610 ALDH1L2Q3SY69 923 aa21.63■■□□□ 1.05
COMMD3-210ENST00000472610 GREM2Q9H772 168 aa21.63■■□□□ 1.05
COMMD3-210ENST00000472610 PTPRCP08575 1304 aa21.62■■□□□ 1.05
COMMD3-210ENST00000472610 CSF1RP07333 972 aa21.62■■□□□ 1.05
COMMD3-210ENST00000472610 LMOD1P29536 600 aaPredicted RBP21.62■■□□□ 1.05
COMMD3-210ENST00000472610 SLC4A10Q6U841 1118 aa21.62■■□□□ 1.05
COMMD3-210ENST00000472610 PNMA8AQ86V59 439 aaPredicted RBP21.62■■□□□ 1.05
COMMD3-210ENST00000472610 TBC1D16Q8TBP0 767 aa21.62■■□□□ 1.05
COMMD3-210ENST00000472610 SRCIN1Q9C0H9 1055 aa21.62■■□□□ 1.05
COMMD3-210ENST00000472610 ANKIB1Q9P2G1 1089 aa21.62■■□□□ 1.05
COMMD3-210ENST00000472610 POLLQ9UGP5 575 aa21.62■■□□□ 1.05
COMMD3-210ENST00000472610 LTBP1Q14766 1721 aa21.61■■□□□ 1.05
COMMD3-210ENST00000472610 EPHX2P34913 555 aa21.61■■□□□ 1.05
COMMD3-210ENST00000472610 CXCL9Q07325 125 aa21.61■■□□□ 1.05
COMMD3-210ENST00000472610 TNIP1Q15025 636 aa21.61■■□□□ 1.05
COMMD3-210ENST00000472610 CHADLQ6NUI6 762 aa21.61■■□□□ 1.05
COMMD3-210ENST00000472610 SSH1Q8WYL5 1049 aa21.61■■□□□ 1.05
COMMD3-210ENST00000472610 BSDC1Q9NW68 430 aaPredicted RBP21.61■■□□□ 1.05
COMMD3-210ENST00000472610 GRM8O00222 908 aa21.6■■□□□ 1.05
COMMD3-210ENST00000472610 CIAPIN1Q6FI81 312 aa21.6■■□□□ 1.05
COMMD3-210ENST00000472610 LDHDQ86WU2 507 aa21.6■■□□□ 1.05
COMMD3-210ENST00000472610 ZC3H12CQ9C0D7 883 aaKnown RBP21.6■■□□□ 1.05
COMMD3-210ENST00000472610 C9orf78Q9NZ63 289 aaPredicted RBP21.6■■□□□ 1.05
COMMD3-210ENST00000472610 GGA1Q9UJY5 639 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms