RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 ENAMQ9NRM1 1142 aa12.71□□□□□ -0.37
SGCE-210ENST00000472326 LRRC4BQ9NT99 713 aa12.71□□□□□ -0.37
SGCE-210ENST00000472326 CCDC87Q9NVE4 849 aa12.71□□□□□ -0.37
SGCE-210ENST00000472326 STK17AQ9UEE5 414 aa12.71□□□□□ -0.37
SGCE-210ENST00000472326 A6NHS1 94 aa12.7□□□□□ -0.38
SGCE-210ENST00000472326 FZD6O60353 706 aa12.7□□□□□ -0.38
SGCE-210ENST00000472326 AEBP1Q8IUX7 1158 aa12.7□□□□□ -0.38
SGCE-210ENST00000472326 TNFRSF25Q93038 417 aa12.7□□□□□ -0.38
SGCE-210ENST00000472326 MDFIQ99750 246 aa12.7□□□□□ -0.38
SGCE-210ENST00000472326 ELOA3CA0A087WX78 387 aaPredicted RBP12.69□□□□□ -0.38
SGCE-210ENST00000472326 SOWAHDA6NJG2 315 aa12.69□□□□□ -0.38
SGCE-210ENST00000472326 ELOA3DA6NLF2 546 aaPredicted RBP12.69□□□□□ -0.38
SGCE-210ENST00000472326 AMPD1P23109 780 aa12.69□□□□□ -0.38
SGCE-210ENST00000472326 MZF1P28698 734 aaPredicted RBP12.69□□□□□ -0.38
SGCE-210ENST00000472326 ADH7P40394 386 aa12.69□□□□□ -0.38
SGCE-210ENST00000472326 KCNA1Q09470 495 aa12.69□□□□□ -0.38
SGCE-210ENST00000472326 ELOA3BQ3SY89 546 aa12.69□□□□□ -0.38
SGCE-210ENST00000472326 ELOA3Q8NG57 546 aa12.69□□□□□ -0.38
SGCE-210ENST00000472326 BTBD6Q96KE9 485 aa12.69□□□□□ -0.38
SGCE-210ENST00000472326 GGNBP2Q9H3C7 697 aa12.69□□□□□ -0.38
SGCE-210ENST00000472326 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
SGCE-210ENST00000472326 FAM181BA6NEQ2 426 aa12.68□□□□□ -0.38
SGCE-210ENST00000472326 ADARB2-AS1A8MUL3 147 aa12.68□□□□□ -0.38
SGCE-210ENST00000472326 C8orf34Q49A92 452 aa12.68□□□□□ -0.38
SGCE-210ENST00000472326 CHSY3Q70JA7 882 aa12.68□□□□□ -0.38
SGCE-210ENST00000472326 DNAJB12Q9NXW2 375 aaKnown RBP12.68□□□□□ -0.38
SGCE-210ENST00000472326 FNDC3AQ9Y2H6 1198 aaKnown RBP12.68□□□□□ -0.38
SGCE-210ENST00000472326 ARHGAP4P98171 946 aa12.67□□□□□ -0.38
SGCE-210ENST00000472326 DHX32Q7L7V1 743 aaKnown RBP12.67□□□□□ -0.38
SGCE-210ENST00000472326 NLRP13Q86W25 1043 aa12.67□□□□□ -0.38
SGCE-210ENST00000472326 MMP20O60882 483 aa12.66□□□□□ -0.38
SGCE-210ENST00000472326 MAP3K6O95382 1288 aa12.66□□□□□ -0.38
SGCE-210ENST00000472326 MLLT1Q03111 559 aaPredicted RBP12.66□□□□□ -0.38
SGCE-210ENST00000472326 RRAGCQ9HB90 399 aa12.66□□□□□ -0.38
SGCE-210ENST00000472326 PCSK2P16519 638 aa12.65□□□□□ -0.38
SGCE-210ENST00000472326 ALAS2P22557 587 aa12.65□□□□□ -0.38
SGCE-210ENST00000472326 ZBTB42B2RXF5 422 aa12.64□□□□□ -0.39
SGCE-210ENST00000472326 MARSP56192 900 aaKnown RBP12.64□□□□□ -0.39
SGCE-210ENST00000472326 SNRPNP63162 240 aaKnown RBP12.64□□□□□ -0.39
SGCE-210ENST00000472326 ZNF438Q7Z4V0 828 aa12.64□□□□□ -0.39
SGCE-210ENST00000472326 TLR7Q9NYK1 1049 aaKnown RBP12.64□□□□□ -0.39
SGCE-210ENST00000472326 TMEM63CQ9P1W3 806 aa12.64□□□□□ -0.39
SGCE-210ENST00000472326 BIN2Q9UBW5 565 aaPredicted RBP12.64□□□□□ -0.39
SGCE-210ENST00000472326 SLC6A14Q9UN76 642 aa12.64□□□□□ -0.39
SGCE-210ENST00000472326 TTC16Q8NEE8 873 aa12.63□□□□□ -0.39
SGCE-210ENST00000472326 HOXB4P17483 251 aaPredicted RBP12.62□□□□□ -0.39
SGCE-210ENST00000472326 HFE2Q6ZVN8 426 aa12.62□□□□□ -0.39
SGCE-210ENST00000472326 NSUN5Q96P11 429 aaKnown RBP12.62□□□□□ -0.39
SGCE-210ENST00000472326 ELP3Q9H9T3 547 aa12.62□□□□□ -0.39
SGCE-210ENST00000472326 NAGPAQ9UK23 515 aa12.62□□□□□ -0.39
SGCE-210ENST00000472326 BRPF3Q9ULD4 1205 aa12.62□□□□□ -0.39
SGCE-210ENST00000472326 STARD13Q9Y3M8 1113 aa12.62□□□□□ -0.39
SGCE-210ENST00000472326 PSAPP07602 524 aa12.61□□□□□ -0.39
SGCE-210ENST00000472326 CNTNAP5Q8WYK1 1306 aa12.61□□□□□ -0.39
SGCE-210ENST00000472326 RPLP1P05386 114 aaKnown RBP12.6□□□□□ -0.39
SGCE-210ENST00000472326 CPB1P15086 417 aa12.6□□□□□ -0.39
SGCE-210ENST00000472326 TTC39BQ5VTQ0 682 aaPredicted RBP12.6□□□□□ -0.39
SGCE-210ENST00000472326 PDE12Q6L8Q7 609 aaKnown RBP12.6□□□□□ -0.39
SGCE-210ENST00000472326 FAM35AQ86V20 835 aa12.6□□□□□ -0.39
SGCE-210ENST00000472326 TRPM4Q8TD43 1214 aa12.6□□□□□ -0.39
SGCE-210ENST00000472326 ABI2Q9NYB9 513 aaPredicted RBP12.6□□□□□ -0.39
SGCE-210ENST00000472326 ALBP02768 609 aa12.59□□□□□ -0.39
SGCE-210ENST00000472326 CYP2E1P05181 493 aaPredicted RBP12.59□□□□□ -0.39
SGCE-210ENST00000472326 GPLD1P80108 840 aa12.59□□□□□ -0.39
SGCE-210ENST00000472326 PLAURQ03405 335 aa12.59□□□□□ -0.39
SGCE-210ENST00000472326 C8orf86Q6ZUL3 223 aa12.59□□□□□ -0.39
SGCE-210ENST00000472326 GJD3Q8N144 294 aa12.59□□□□□ -0.39
SGCE-210ENST00000472326 CNTN3Q9P232 1028 aa12.59□□□□□ -0.39
SGCE-210ENST00000472326 J3QW42 95 aa12.58□□□□□ -0.4
SGCE-210ENST00000472326 USP5P45974 858 aa12.58□□□□□ -0.4
SGCE-210ENST00000472326 DGKGP49619 791 aa12.58□□□□□ -0.4
SGCE-210ENST00000472326 NRLP54845 237 aa12.58□□□□□ -0.4
SGCE-210ENST00000472326 NUDT8Q8WV74 236 aa12.58□□□□□ -0.4
SGCE-210ENST00000472326 M0R082 166 aa12.57□□□□□ -0.4
SGCE-210ENST00000472326 NDUFB5O43674 189 aa12.57□□□□□ -0.4
SGCE-210ENST00000472326 OR13H1Q8NG92 308 aa12.57□□□□□ -0.4
SGCE-210ENST00000472326 ZNF417Q8TAU3 575 aa12.57□□□□□ -0.4
SGCE-210ENST00000472326 ZNF587Q96SQ5 575 aaPredicted RBP12.57□□□□□ -0.4
SGCE-210ENST00000472326 COL13A1Q5TAT6 717 aaPredicted RBP12.56□□□□□ -0.4
SGCE-210ENST00000472326 PSAPL1Q6NUJ1 521 aa12.56□□□□□ -0.4
SGCE-210ENST00000472326 XKR5Q6UX68 686 aa12.56□□□□□ -0.4
SGCE-210ENST00000472326 HOMEZQ8IX15 550 aa12.56□□□□□ -0.4
SGCE-210ENST00000472326 KCTD17Q8N5Z5 321 aa12.56□□□□□ -0.4
SGCE-210ENST00000472326 C1orf127Q8N9H9 656 aa12.56□□□□□ -0.4
SGCE-210ENST00000472326 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.56□□□□□ -0.4
SGCE-210ENST00000472326 SOX18P35713 384 aa12.55□□□□□ -0.4
SGCE-210ENST00000472326 C20orf204Q6ZNR8 217 aa12.55□□□□□ -0.4
SGCE-210ENST00000472326 MICALL1Q8N3F8 863 aa12.55□□□□□ -0.4
SGCE-210ENST00000472326 KANSL3Q9P2N6 904 aa12.55□□□□□ -0.4
SGCE-210ENST00000472326 FOXD3Q9UJU5 478 aaPredicted RBP12.55□□□□□ -0.4
SGCE-210ENST00000472326 LOC102724428A0A0B4J2F2 783 aa12.54□□□□□ -0.4
SGCE-210ENST00000472326 PATL2C9JE40 543 aaKnown RBP12.54□□□□□ -0.4
SGCE-210ENST00000472326 EIF2AK2P19525 551 aaKnown RBP12.54□□□□□ -0.4
SGCE-210ENST00000472326 SIK1P57059 783 aa12.54□□□□□ -0.4
SGCE-210ENST00000472326 PCSK7Q16549 785 aa12.54□□□□□ -0.4
SGCE-210ENST00000472326 PERM1Q5SV97 790 aa12.54□□□□□ -0.4
SGCE-210ENST00000472326 KANK3Q6NY19 840 aa12.54□□□□□ -0.4
SGCE-210ENST00000472326 LINC00114Q6XXX2 140 aa12.54□□□□□ -0.4
SGCE-210ENST00000472326 PODNQ7Z5L7 613 aa12.54□□□□□ -0.4
SGCE-210ENST00000472326 BEND7Q8N7W2 519 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms