RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 NFKB1P19838 968 aa8.25□□□□□ -1.09
CDHR3-208ENST00000471910 TARSP26639 723 aaKnown RBP8.25□□□□□ -1.09
CDHR3-208ENST00000471910 ADH6P28332 368 aa8.25□□□□□ -1.09
CDHR3-208ENST00000471910 GRIN2CQ14957 1233 aa8.25□□□□□ -1.09
CDHR3-208ENST00000471910 TRIP4Q15650 581 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-208ENST00000471910 RAB44Q7Z6P3 723 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-208ENST00000471910 GOLGA6L1Q8N7Z2 621 aa8.25□□□□□ -1.09
CDHR3-208ENST00000471910 ELP3Q9H9T3 547 aa8.25□□□□□ -1.09
CDHR3-208ENST00000471910 SIN3BO75182 1162 aa8.24□□□□□ -1.09
CDHR3-208ENST00000471910 MAP3K6O95382 1288 aa8.24□□□□□ -1.09
CDHR3-208ENST00000471910 PCBP4P57723 403 aaKnown RBP8.24□□□□□ -1.09
CDHR3-208ENST00000471910 KRT76Q01546 638 aa8.24□□□□□ -1.09
CDHR3-208ENST00000471910 PCSK7Q16549 785 aa8.24□□□□□ -1.09
CDHR3-208ENST00000471910 OXCT2Q9BYC2 517 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-208ENST00000471910 PSAPP07602 524 aa8.23□□□□□ -1.09
CDHR3-208ENST00000471910 PMEPA1Q969W9 287 aa8.23□□□□□ -1.09
CDHR3-208ENST00000471910 FAM129BQ96TA1 746 aa8.23□□□□□ -1.09
CDHR3-208ENST00000471910 IGFLR1Q9H665 355 aa8.23□□□□□ -1.09
CDHR3-208ENST00000471910 ABI2Q9NYB9 513 aaPredicted RBP8.23□□□□□ -1.09
CDHR3-208ENST00000471910 A6NHS1 94 aa8.22□□□□□ -1.09
CDHR3-208ENST00000471910 NEURL1BA8MQ27 555 aa8.22□□□□□ -1.09
CDHR3-208ENST00000471910 ALAS2P22557 587 aa8.22□□□□□ -1.09
CDHR3-208ENST00000471910 ASB16Q96NS5 453 aa8.22□□□□□ -1.09
CDHR3-208ENST00000471910 UBE2OQ9C0C9 1292 aaKnown RBP8.22□□□□□ -1.09
CDHR3-208ENST00000471910 GGA1Q9UJY5 639 aa8.22□□□□□ -1.09
CDHR3-208ENST00000471910 PHF20L1A8MW92 1017 aa8.21□□□□□ -1.1
CDHR3-208ENST00000471910 SLURP2P0DP57 97 aa8.21□□□□□ -1.1
CDHR3-208ENST00000471910 ERCC3P19447 782 aa8.21□□□□□ -1.1
CDHR3-208ENST00000471910 PLCB3Q01970 1234 aa8.21□□□□□ -1.1
CDHR3-208ENST00000471910 TBC1D8BQ0IIM8 1120 aa8.21□□□□□ -1.1
CDHR3-208ENST00000471910 DHX32Q7L7V1 743 aaKnown RBP8.21□□□□□ -1.1
CDHR3-208ENST00000471910 TMC7Q7Z402 723 aa8.21□□□□□ -1.1
CDHR3-208ENST00000471910 TLR7Q9NYK1 1049 aaKnown RBP8.21□□□□□ -1.1
CDHR3-208ENST00000471910 ZFATQ9P243 1243 aa8.21□□□□□ -1.1
CDHR3-208ENST00000471910 MMP20O60882 483 aa8.2□□□□□ -1.1
CDHR3-208ENST00000471910 PHACTR2O75167 634 aa8.2□□□□□ -1.1
CDHR3-208ENST00000471910 MAP3K10Q02779 954 aa8.2□□□□□ -1.1
CDHR3-208ENST00000471910 PLAURQ03405 335 aa8.2□□□□□ -1.1
CDHR3-208ENST00000471910 LCE2AQ5TA79 106 aaPredicted RBP8.2□□□□□ -1.1
CDHR3-208ENST00000471910 LCE2CQ5TA81 110 aa8.2□□□□□ -1.1
CDHR3-208ENST00000471910 SNX29Q8TEQ0 813 aa8.2□□□□□ -1.1
CDHR3-208ENST00000471910 TNFRSF25Q93038 417 aa8.2□□□□□ -1.1
CDHR3-208ENST00000471910 NIF3L1Q9GZT8 377 aa8.2□□□□□ -1.1
CDHR3-208ENST00000471910 TMEM63CQ9P1W3 806 aa8.2□□□□□ -1.1
CDHR3-208ENST00000471910 WIPF1O43516 503 aa8.19□□□□□ -1.1
CDHR3-208ENST00000471910 TNFRSF21O75509 655 aa8.19□□□□□ -1.1
CDHR3-208ENST00000471910 BCRP11274 1271 aa8.19□□□□□ -1.1
CDHR3-208ENST00000471910 SOX18P35713 384 aa8.19□□□□□ -1.1
CDHR3-208ENST00000471910 SLCO4C1Q6ZQN7 724 aa8.19□□□□□ -1.1
CDHR3-208ENST00000471910 OR13H1Q8NG92 308 aa8.19□□□□□ -1.1
CDHR3-208ENST00000471910 ACDQ96AP0 544 aa8.19□□□□□ -1.1
CDHR3-208ENST00000471910 ALKBH8Q96BT7 664 aaKnown RBP8.19□□□□□ -1.1
CDHR3-208ENST00000471910 ENAMQ9NRM1 1142 aa8.19□□□□□ -1.1
CDHR3-208ENST00000471910 LRRC4BQ9NT99 713 aa8.19□□□□□ -1.1
CDHR3-208ENST00000471910 ELOA3CA0A087WX78 387 aaPredicted RBP8.18□□□□□ -1.1
CDHR3-208ENST00000471910 ELOA3DA6NLF2 546 aaPredicted RBP8.18□□□□□ -1.1
CDHR3-208ENST00000471910 ADARB2-AS1A8MUL3 147 aa8.18□□□□□ -1.1
CDHR3-208ENST00000471910 CES1P23141 567 aa8.18□□□□□ -1.1
CDHR3-208ENST00000471910 NRLP54845 237 aa8.18□□□□□ -1.1
CDHR3-208ENST00000471910 MFAP1P55081 439 aaKnown RBP8.18□□□□□ -1.1
CDHR3-208ENST00000471910 HYAL2Q12891 473 aa8.18□□□□□ -1.1
CDHR3-208ENST00000471910 ELOA3BQ3SY89 546 aa8.18□□□□□ -1.1
CDHR3-208ENST00000471910 GALNT6Q8NCL4 622 aa8.18□□□□□ -1.1
CDHR3-208ENST00000471910 ELOA3Q8NG57 546 aa8.18□□□□□ -1.1
CDHR3-208ENST00000471910 EDARADDQ8WWZ3 215 aa8.18□□□□□ -1.1
CDHR3-208ENST00000471910 RBSNQ9H1K0 784 aa8.18□□□□□ -1.1
CDHR3-208ENST00000471910 DNAJB12Q9NXW2 375 aaKnown RBP8.18□□□□□ -1.1
CDHR3-208ENST00000471910 KLF15Q9UIH9 416 aa8.18□□□□□ -1.1
CDHR3-208ENST00000471910 CCDC9Q9Y3X0 531 aaKnown RBP8.18□□□□□ -1.1
CDHR3-208ENST00000471910 ANKRD33BA6NCL7 494 aa8.17□□□□□ -1.1
CDHR3-208ENST00000471910 FCHSD1Q86WN1 690 aa8.17□□□□□ -1.1
CDHR3-208ENST00000471910 TRPM4Q8TD43 1214 aa8.17□□□□□ -1.1
CDHR3-208ENST00000471910 SPACA7Q96KW9 195 aa8.17□□□□□ -1.1
CDHR3-208ENST00000471910 GPR182O15218 404 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 TREHO43280 583 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 OIP5O43482 229 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 CPNE3O75131 537 aaKnown RBP8.16□□□□□ -1.1
CDHR3-208ENST00000471910 CELA2BP08218 269 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-208ENST00000471910 EPXP11678 715 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 ADH7P40394 386 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 GPLD1P80108 840 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 INSM1Q01101 510 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-208ENST00000471910 LYPD4Q6UWN0 246 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 C1orf127Q8N9H9 656 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 DNAJC25Q9H1X3 360 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 ZFYVE28Q9HCC9 887 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 PODXL2Q9NZ53 605 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 CNTN3Q9P232 1028 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 FOXD3Q9UJU5 478 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-208ENST00000471910 AMOTL2Q9Y2J4 779 aa8.16□□□□□ -1.1
CDHR3-208ENST00000471910 LOC102724428A0A0B4J2F2 783 aa8.15□□□□□ -1.1
CDHR3-208ENST00000471910 GHRHP01286 108 aa8.15□□□□□ -1.1
CDHR3-208ENST00000471910 HOXD8P13378 290 aaPredicted RBP8.15□□□□□ -1.1
CDHR3-208ENST00000471910 AMPD1P23109 780 aa8.15□□□□□ -1.1
CDHR3-208ENST00000471910 SIK1P57059 783 aa8.15□□□□□ -1.1
CDHR3-208ENST00000471910 COL19A1Q14993 1142 aa8.15□□□□□ -1.1
CDHR3-208ENST00000471910 NCAPG2Q86XI2 1143 aa8.15□□□□□ -1.1
CDHR3-208ENST00000471910 SVOPQ8N4V2 548 aa8.15□□□□□ -1.1
CDHR3-208ENST00000471910 SLC6A14Q9UN76 642 aa8.15□□□□□ -1.1
CDHR3-208ENST00000471910 IGHA2P01877 340 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms