RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 ATP5J2-PTCD1G3V325 749 aa24.33■■□□□ 1.49
COMMD1-207ENST00000471704 PPIP5K2O43314 1243 aa24.33■■□□□ 1.49
COMMD1-207ENST00000471704 GRAPQ13588 217 aa24.33■■□□□ 1.49
COMMD1-207ENST00000471704 NIM1KQ8IY84 436 aa24.33■■□□□ 1.49
COMMD1-207ENST00000471704 GRAPLQ8TC17 118 aaPredicted RBP24.33■■□□□ 1.49
COMMD1-207ENST00000471704 GJA3Q9Y6H8 435 aa24.33■■□□□ 1.49
COMMD1-207ENST00000471704 IL16Q14005 1332 aa24.33■■□□□ 1.48
COMMD1-207ENST00000471704 LRRC37AA6NMS7 1700 aa24.32■■□□□ 1.48
COMMD1-207ENST00000471704 SCNN1DP51172 638 aa24.32■■□□□ 1.48
COMMD1-207ENST00000471704 AOC3Q16853 763 aa24.32■■□□□ 1.48
COMMD1-207ENST00000471704 SUPT20HQ8NEM7 779 aa24.32■■□□□ 1.48
COMMD1-207ENST00000471704 SALL2Q9Y467 1007 aaPredicted RBP24.32■■□□□ 1.48
COMMD1-207ENST00000471704 SF3B3Q15393 1217 aaKnown RBP24.31■■□□□ 1.48
COMMD1-207ENST00000471704 FAM89AQ96GI7 184 aa24.31■■□□□ 1.48
COMMD1-207ENST00000471704 CLEC11AQ9Y240 323 aa24.31■■□□□ 1.48
COMMD1-207ENST00000471704 DPP8Q6V1X1 898 aaPredicted RBP24.3■■□□□ 1.48
COMMD1-207ENST00000471704 TMC4Q7Z404 712 aa24.3■■□□□ 1.48
COMMD1-207ENST00000471704 CNTROBQ8N137 903 aa24.3■■□□□ 1.48
COMMD1-207ENST00000471704 MPNDQ8N594 471 aa24.3■■□□□ 1.48
COMMD1-207ENST00000471704 EPS15P42566 896 aa24.29■■□□□ 1.48
COMMD1-207ENST00000471704 CCDC30Q5VVM6 783 aa24.29■■□□□ 1.48
COMMD1-207ENST00000471704 FAM9BQ8IZU0 186 aa24.29■■□□□ 1.48
COMMD1-207ENST00000471704 ZNRF3Q9ULT6 936 aa24.29■■□□□ 1.48
COMMD1-207ENST00000471704 FANCIQ9NVI1 1328 aa24.29■■□□□ 1.48
COMMD1-207ENST00000471704 LMOD1P29536 600 aaPredicted RBP24.28■■□□□ 1.48
COMMD1-207ENST00000471704 CXCL9Q07325 125 aa24.28■■□□□ 1.48
COMMD1-207ENST00000471704 KIAA2012Q0VF49 1180 aa24.28■■□□□ 1.48
COMMD1-207ENST00000471704 MAP1SQ66K74 1059 aaPredicted RBP24.28■■□□□ 1.48
COMMD1-207ENST00000471704 RIC3Q7Z5B4 369 aa24.28■■□□□ 1.48
COMMD1-207ENST00000471704 MKRN1Q9UHC7 482 aaKnown RBP24.28■■□□□ 1.48
COMMD1-207ENST00000471704 CACNA1FO60840 1977 aa24.28■■□□□ 1.48
COMMD1-207ENST00000471704 CNTNAP1P78357 1384 aa24.28■■□□□ 1.48
COMMD1-207ENST00000471704 TMEM88BA6NKF7 163 aa24.27■■□□□ 1.48
COMMD1-207ENST00000471704 GOLGA2Q08379 1002 aa24.27■■□□□ 1.48
COMMD1-207ENST00000471704 TWISTNBQ3B726 338 aaPredicted RBP24.27■■□□□ 1.48
COMMD1-207ENST00000471704 COL13A1Q5TAT6 717 aaPredicted RBP24.27■■□□□ 1.48
COMMD1-207ENST00000471704 SPINK5Q9NQ38 1064 aaPredicted RBP24.27■■□□□ 1.48
COMMD1-207ENST00000471704 DUOX1Q9NRD9 1551 aa24.27■■□□□ 1.48
COMMD1-207ENST00000471704 HSPA1AP0DMV8 641 aaKnown RBP24.26■■□□□ 1.47
COMMD1-207ENST00000471704 HSPA1BP0DMV9 641 aaKnown RBP24.26■■□□□ 1.47
COMMD1-207ENST00000471704 WDR63Q8IWG1 891 aa24.26■■□□□ 1.47
COMMD1-207ENST00000471704 MYD88Q99836 296 aa24.26■■□□□ 1.47
COMMD1-207ENST00000471704 RTL5Q5HYW3 569 aaPredicted RBP24.25■■□□□ 1.47
COMMD1-207ENST00000471704 USP50Q70EL3 339 aaPredicted RBP24.25■■□□□ 1.47
COMMD1-207ENST00000471704 CELF1Q92879 486 aaKnown RBP24.25■■□□□ 1.47
COMMD1-207ENST00000471704 GPRC5DQ9NZD1 345 aa24.25■■□□□ 1.47
COMMD1-207ENST00000471704 IRS4O14654 1257 aaPredicted RBP24.24■■□□□ 1.47
COMMD1-207ENST00000471704 G2E3Q7L622 706 aa24.24■■□□□ 1.47
COMMD1-207ENST00000471704 ZBTB38Q8NAP3 1195 aaPredicted RBP24.24■■□□□ 1.47
COMMD1-207ENST00000471704 METTL22Q9BUU2 404 aaPredicted RBP24.23■■□□□ 1.47
COMMD1-207ENST00000471704 CHMP4AQ9BY43 222 aa24.23■■□□□ 1.47
COMMD1-207ENST00000471704 MYH3P11055 1940 aa24.23■■□□□ 1.47
COMMD1-207ENST00000471704 MAP3K2Q9Y2U5 619 aa24.22■■□□□ 1.47
COMMD1-207ENST00000471704 CIAPIN1Q6FI81 312 aa24.21■■□□□ 1.47
COMMD1-207ENST00000471704 CCDC191Q8NCU4 936 aa24.21■■□□□ 1.47
COMMD1-207ENST00000471704 YDJCA8MPS7 323 aa24.2■■□□□ 1.46
COMMD1-207ENST00000471704 VEGFBP49765 207 aa24.2■■□□□ 1.46
COMMD1-207ENST00000471704 GMPSP49915 693 aaPredicted RBP24.2■■□□□ 1.46
COMMD1-207ENST00000471704 EXOSC9Q06265 439 aaKnown RBP24.2■■□□□ 1.46
COMMD1-207ENST00000471704 ADARB2Q9NS39 739 aaKnown RBP24.2■■□□□ 1.46
COMMD1-207ENST00000471704 PI4KAP2A4QPH2 592 aa24.19■■□□□ 1.46
COMMD1-207ENST00000471704 RASSF10A6NK89 507 aa24.19■■□□□ 1.46
COMMD1-207ENST00000471704 VAMP4O75379 141 aa24.19■■□□□ 1.46
COMMD1-207ENST00000471704 RAD17O75943 681 aa24.19■■□□□ 1.46
COMMD1-207ENST00000471704 DDX58O95786 925 aaKnown RBP24.19■■□□□ 1.46
COMMD1-207ENST00000471704 PCCAP05165 728 aaPredicted RBP24.19■■□□□ 1.46
COMMD1-207ENST00000471704 IGKV5-2P06315 115 aa24.19■■□□□ 1.46
COMMD1-207ENST00000471704 RPS8P62241 208 aaKnown RBP24.19■■□□□ 1.46
COMMD1-207ENST00000471704 TNIP1Q15025 636 aa24.19■■□□□ 1.46
COMMD1-207ENST00000471704 KSR2Q6VAB6 950 aa24.19■■□□□ 1.46
COMMD1-207ENST00000471704 PI4KAP1Q8N8J0 262 aa24.19■■□□□ 1.46
COMMD1-207ENST00000471704 JARID2Q92833 1246 aaPredicted RBP24.19■■□□□ 1.46
COMMD1-207ENST00000471704 STK31Q9BXU1 1019 aa24.19■■□□□ 1.46
COMMD1-207ENST00000471704 NSFL1CQ9UNZ2 370 aaKnown RBP24.19■■□□□ 1.46
COMMD1-207ENST00000471704 SPEF2Q9C093 1822 aa24.19■■□□□ 1.46
COMMD1-207ENST00000471704 ZNF521Q96K83 1311 aa24.18■■□□□ 1.46
COMMD1-207ENST00000471704 CDHR2Q9BYE9 1310 aa24.18■■□□□ 1.46
COMMD1-207ENST00000471704 TRPM7Q96QT4 1865 aa24.18■■□□□ 1.46
COMMD1-207ENST00000471704 SLC4A2P04920 1241 aa24.18■■□□□ 1.46
COMMD1-207ENST00000471704 HSP90B1P14625 803 aaKnown RBP24.18■■□□□ 1.46
COMMD1-207ENST00000471704 GPSM2P81274 684 aa24.18■■□□□ 1.46
COMMD1-207ENST00000471704 POLLQ9UGP5 575 aa24.18■■□□□ 1.46
COMMD1-207ENST00000471704 WASHC4Q2M389 1173 aa24.17■■□□□ 1.46
COMMD1-207ENST00000471704 CWC25Q9NXE8 425 aaPredicted RBP24.17■■□□□ 1.46
COMMD1-207ENST00000471704 PGAP2Q9UHJ9 254 aa24.17■■□□□ 1.46
COMMD1-207ENST00000471704 FMR1Q06787 632 aaKnown RBP eCLIP24.16■■□□□ 1.46
COMMD1-207ENST00000471704 SEC31BQ9NQW1 1179 aa24.16■■□□□ 1.46
COMMD1-207ENST00000471704 DEFB115Q30KQ5 88 aa24.15■■□□□ 1.46
COMMD1-207ENST00000471704 PDE8AO60658 829 aa24.14■■□□□ 1.45
COMMD1-207ENST00000471704 FLIIQ13045 1269 aa24.14■■□□□ 1.45
COMMD1-207ENST00000471704 CWF19L2Q2TBE0 894 aaKnown RBP24.14■■□□□ 1.45
COMMD1-207ENST00000471704 CST9Q5W186 159 aa24.14■■□□□ 1.45
COMMD1-207ENST00000471704 TBC1D16Q8TBP0 767 aa24.14■■□□□ 1.45
COMMD1-207ENST00000471704 BCL2L13Q9BXK5 485 aa24.14■■□□□ 1.45
COMMD1-207ENST00000471704 PODXL2Q9NZ53 605 aa24.14■■□□□ 1.45
COMMD1-207ENST00000471704 C6orf229H3BNL8 230 aa24.13■■□□□ 1.45
COMMD1-207ENST00000471704 TRAF5O00463 557 aa24.13■■□□□ 1.45
COMMD1-207ENST00000471704 HIRAP54198 1017 aaPredicted RBP24.13■■□□□ 1.45
COMMD1-207ENST00000471704 CNOT7Q9UIV1 285 aaKnown RBP24.13■■□□□ 1.45
COMMD1-207ENST00000471704 RIMBP2O15034 1052 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms