RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 C3orf67Q6ZVT6 689 aa19.2■□□□□ 0.66
COMMD6-208ENST00000471682 TTLL6Q8N841 843 aa19.2■□□□□ 0.66
COMMD6-208ENST00000471682 TTLL11Q8NHH1 800 aa19.2■□□□□ 0.66
COMMD6-208ENST00000471682 PANK1Q8TE04 598 aa19.2■□□□□ 0.66
COMMD6-208ENST00000471682 BRCA1P38398 1863 aaKnown RBP19.2■□□□□ 0.66
COMMD6-208ENST00000471682 COL11A2P13942 1736 aaPredicted RBP19.2■□□□□ 0.66
COMMD6-208ENST00000471682 MYH3P11055 1940 aa19.19■□□□□ 0.66
COMMD6-208ENST00000471682 MVPQ14764 893 aaKnown RBP19.19■□□□□ 0.66
COMMD6-208ENST00000471682 RABL6Q3YEC7 729 aaPredicted RBP19.19■□□□□ 0.66
COMMD6-208ENST00000471682 DDX46Q7L014 1031 aaKnown RBP19.19■□□□□ 0.66
COMMD6-208ENST00000471682 ITPRIPQ8IWB1 547 aa19.19■□□□□ 0.66
COMMD6-208ENST00000471682 DDX19BQ9UMR2 479 aa19.19■□□□□ 0.66
COMMD6-208ENST00000471682 ZBTB7BO15156 539 aaPredicted RBP19.18■□□□□ 0.66
COMMD6-208ENST00000471682 FOXO4P98177 505 aa19.18■□□□□ 0.66
COMMD6-208ENST00000471682 DALRD3Q5D0E6 543 aaKnown RBP19.18■□□□□ 0.66
COMMD6-208ENST00000471682 ZNF622Q969S3 477 aaKnown RBP eCLIP19.18■□□□□ 0.66
COMMD6-208ENST00000471682 MEIS3Q99687 375 aa19.18■□□□□ 0.66
COMMD6-208ENST00000471682 BBOX1O75936 387 aa19.17■□□□□ 0.66
COMMD6-208ENST00000471682 TMC4Q7Z404 712 aa19.17■□□□□ 0.66
COMMD6-208ENST00000471682 KAZALD1Q96I82 304 aa19.17■□□□□ 0.66
COMMD6-208ENST00000471682 SUCLG2Q96I99 432 aa19.17■□□□□ 0.66
COMMD6-208ENST00000471682 GRAPQ13588 217 aa19.16■□□□□ 0.66
COMMD6-208ENST00000471682 GRAPLQ8TC17 118 aaPredicted RBP19.16■□□□□ 0.66
COMMD6-208ENST00000471682 GNAI2P04899 355 aa19.15■□□□□ 0.66
COMMD6-208ENST00000471682 EPHA10Q5JZY3 1008 aa19.15■□□□□ 0.66
COMMD6-208ENST00000471682 SOGA3Q5TF21 947 aa19.15■□□□□ 0.66
COMMD6-208ENST00000471682 CDC5LQ99459 802 aaKnown RBP19.15■□□□□ 0.66
COMMD6-208ENST00000471682 GRIPAP1Q4V328 841 aa19.14■□□□□ 0.65
COMMD6-208ENST00000471682 CC2D2BQ6DHV5 1058 aa19.14■□□□□ 0.65
COMMD6-208ENST00000471682 PRPF40BQ6NWY9 871 aaKnown RBP19.14■□□□□ 0.65
COMMD6-208ENST00000471682 LMBR1LQ6UX01 489 aa19.14■□□□□ 0.65
COMMD6-208ENST00000471682 ANKRD44Q8N8A2 993 aa19.14■□□□□ 0.65
COMMD6-208ENST00000471682 BICC1Q9H694 974 aaKnown RBP19.14■□□□□ 0.65
COMMD6-208ENST00000471682 GREM2Q9H772 168 aa19.14■□□□□ 0.65
COMMD6-208ENST00000471682 COG6Q9Y2V7 657 aa19.14■□□□□ 0.65
COMMD6-208ENST00000471682 CENPBP07199 599 aaPredicted RBP19.13■□□□□ 0.65
COMMD6-208ENST00000471682 RPS8P62241 208 aaKnown RBP19.13■□□□□ 0.65
COMMD6-208ENST00000471682 MTX1Q13505 466 aa19.13■□□□□ 0.65
COMMD6-208ENST00000471682 C20orf194Q5TEA3 1177 aa19.13■□□□□ 0.65
COMMD6-208ENST00000471682 C7orf43Q8WVR3 580 aa19.13■□□□□ 0.65
COMMD6-208ENST00000471682 SUPT16HQ9Y5B9 1047 aaKnown RBP19.13■□□□□ 0.65
COMMD6-208ENST00000471682 LRRFIP2Q9Y608 721 aaKnown RBP19.13■□□□□ 0.65
COMMD6-208ENST00000471682 ARFGEF1Q9Y6D6 1849 aa19.13■□□□□ 0.65
COMMD6-208ENST00000471682 ANKRD18BA2A2Z9 1011 aa19.12■□□□□ 0.65
COMMD6-208ENST00000471682 GRIN3BO60391 1043 aa19.12■□□□□ 0.65
COMMD6-208ENST00000471682 ITGA6P23229 1130 aa19.12■□□□□ 0.65
COMMD6-208ENST00000471682 IFIT5Q13325 482 aaKnown RBP19.12■□□□□ 0.65
COMMD6-208ENST00000471682 FAM161AQ3B820 660 aa19.12■□□□□ 0.65
COMMD6-208ENST00000471682 BCS1LQ9Y276 419 aa19.12■□□□□ 0.65
COMMD6-208ENST00000471682 DCAF8L1A6NGE4 600 aa19.11■□□□□ 0.65
COMMD6-208ENST00000471682 CCDC57Q2TAC2 916 aa19.11■□□□□ 0.65
COMMD6-208ENST00000471682 SP8Q8IXZ3 490 aa19.11■□□□□ 0.65
COMMD6-208ENST00000471682 CELF1Q92879 486 aaKnown RBP19.11■□□□□ 0.65
COMMD6-208ENST00000471682 SEC31BQ9NQW1 1179 aa19.11■□□□□ 0.65
COMMD6-208ENST00000471682 ZBTB40Q9NUA8 1239 aa19.11■□□□□ 0.65
COMMD6-208ENST00000471682 ATP6V0A2Q9Y487 856 aa19.11■□□□□ 0.65
COMMD6-208ENST00000471682 SLX4Q8IY92 1834 aa19.1■□□□□ 0.65
COMMD6-208ENST00000471682 PPEF1O14829 653 aaPredicted RBP19.1■□□□□ 0.65
COMMD6-208ENST00000471682 AAMPQ13685 434 aa19.1■□□□□ 0.65
COMMD6-208ENST00000471682 ANKRD18AQ8IVF6 992 aa19.1■□□□□ 0.65
COMMD6-208ENST00000471682 TMX4Q9H1E5 349 aaPredicted RBP19.1■□□□□ 0.65
COMMD6-208ENST00000471682 IGHMBP2P38935 993 aaKnown RBP19.09■□□□□ 0.65
COMMD6-208ENST00000471682 GPR162Q16538 588 aa19.09■□□□□ 0.65
COMMD6-208ENST00000471682 CCDC85AQ96PX6 553 aaPredicted RBP19.09■□□□□ 0.65
COMMD6-208ENST00000471682 BSDC1Q9NW68 430 aaPredicted RBP19.09■□□□□ 0.65
COMMD6-208ENST00000471682 CHMP3Q9Y3E7 222 aa19.09■□□□□ 0.65
COMMD6-208ENST00000471682 YBX3P16989 372 aaKnown RBP eCLIP19.08■□□□□ 0.64
COMMD6-208ENST00000471682 CCDC93Q567U6 631 aa19.07■□□□□ 0.64
COMMD6-208ENST00000471682 RTKN2Q8IZC4 609 aa19.07■□□□□ 0.64
COMMD6-208ENST00000471682 FBXO3Q9UK99 471 aa19.07■□□□□ 0.64
COMMD6-208ENST00000471682 C21orf2O43822 256 aa19.06■□□□□ 0.64
COMMD6-208ENST00000471682 ATP8B2P98198 1209 aa19.06■□□□□ 0.64
COMMD6-208ENST00000471682 RPAP2Q8IXW5 612 aaPredicted RBP19.06■□□□□ 0.64
COMMD6-208ENST00000471682 MPHOSPH8Q99549 860 aa19.06■□□□□ 0.64
COMMD6-208ENST00000471682 LTBP3Q9NS15 1303 aa19.05■□□□□ 0.64
COMMD6-208ENST00000471682 RFX5P48382 616 aaPredicted RBP19.05■□□□□ 0.64
COMMD6-208ENST00000471682 TAF7LQ5H9L4 462 aa19.05■□□□□ 0.64
COMMD6-208ENST00000471682 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
COMMD6-208ENST00000471682 SNED1Q8TER0 1413 aa19.05■□□□□ 0.64
COMMD6-208ENST00000471682 LRRC37AA6NMS7 1700 aa19.05■□□□□ 0.64
COMMD6-208ENST00000471682 CACNA1SQ13698 1873 aa19.05■□□□□ 0.64
COMMD6-208ENST00000471682 SRGAP3O43295 1099 aa19.04■□□□□ 0.64
COMMD6-208ENST00000471682 TAF1P21675 1872 aa19.04■□□□□ 0.64
COMMD6-208ENST00000471682 PSMD1Q99460 953 aa19.04■□□□□ 0.64
COMMD6-208ENST00000471682 COPRSQ9NQ92 184 aa19.04■□□□□ 0.64
COMMD6-208ENST00000471682 PODXL2Q9NZ53 605 aa19.04■□□□□ 0.64
COMMD6-208ENST00000471682 WWC3Q9ULE0 1092 aa19.04■□□□□ 0.64
COMMD6-208ENST00000471682 PTPN12Q05209 780 aaKnown RBP19.03■□□□□ 0.64
COMMD6-208ENST00000471682 CEP85Q6P2H3 762 aa19.03■□□□□ 0.64
COMMD6-208ENST00000471682 LDHAL6AQ6ZMR3 332 aa19.03■□□□□ 0.64
COMMD6-208ENST00000471682 SSH3Q8TE77 659 aa19.03■□□□□ 0.64
COMMD6-208ENST00000471682 CRBNQ96SW2 442 aa19.03■□□□□ 0.64
COMMD6-208ENST00000471682 COL4A1P02462 1669 aa19.03■□□□□ 0.64
COMMD6-208ENST00000471682 CIAO1O76071 339 aa19.02■□□□□ 0.64
COMMD6-208ENST00000471682 POLA2Q14181 598 aa19.02■□□□□ 0.64
COMMD6-208ENST00000471682 MPNDQ8N594 471 aa19.02■□□□□ 0.64
COMMD6-208ENST00000471682 RTFDC1Q9BY42 306 aaPredicted RBP19.02■□□□□ 0.64
COMMD6-208ENST00000471682 ANKRD2Q9GZV1 360 aa19.02■□□□□ 0.64
COMMD6-208ENST00000471682 VPS33BQ9H267 617 aa19.02■□□□□ 0.64
COMMD6-208ENST00000471682 C1orf115Q9H7X2 142 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms