RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 CASTP20810 708 aaKnown RBP22.37■■□□□ 1.17
COL20A1-205ENST00000471582 PRPF40BQ6NWY9 871 aaKnown RBP22.37■■□□□ 1.17
COL20A1-205ENST00000471582 ATG3Q9NT62 314 aa22.37■■□□□ 1.17
COL20A1-205ENST00000471582 RBM8AQ9Y5S9 174 aaKnown RBP22.37■■□□□ 1.17
COL20A1-205ENST00000471582 TICAM2Q86XR7 235 aa22.36■■□□□ 1.17
COL20A1-205ENST00000471582 ZBTB3Q9H5J0 574 aa22.36■■□□□ 1.17
COL20A1-205ENST00000471582 GRPEL1Q9HAV7 217 aa22.36■■□□□ 1.17
COL20A1-205ENST00000471582 A0A0D9SFI3 127 aa22.35■■□□□ 1.17
COL20A1-205ENST00000471582 RUFY3Q7L099 469 aa22.35■■□□□ 1.17
COL20A1-205ENST00000471582 USP21Q9UK80 565 aa22.35■■□□□ 1.17
COL20A1-205ENST00000471582 DOT1LQ8TEK3 1739 aa22.35■■□□□ 1.17
COL20A1-205ENST00000471582 TRIM28Q13263 835 aaKnown RBP22.35■■□□□ 1.17
COL20A1-205ENST00000471582 ISCA1Q9BUE6 129 aa22.35■■□□□ 1.17
COL20A1-205ENST00000471582 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.35■■□□□ 1.17
COL20A1-205ENST00000471582 CYP46A1Q9Y6A2 500 aa22.35■■□□□ 1.17
COL20A1-205ENST00000471582 WDR33Q9C0J8 1336 aaKnown RBP22.35■■□□□ 1.17
COL20A1-205ENST00000471582 RPAP1Q9BWH6 1393 aaPredicted RBP22.34■■□□□ 1.17
COL20A1-205ENST00000471582 STARD3NLO95772 234 aa22.34■■□□□ 1.17
COL20A1-205ENST00000471582 IL15P40933 162 aaPredicted RBP22.34■■□□□ 1.17
COL20A1-205ENST00000471582 RNF20Q5VTR2 975 aa22.34■■□□□ 1.17
COL20A1-205ENST00000471582 CREB3L3Q68CJ9 461 aa22.34■■□□□ 1.17
COL20A1-205ENST00000471582 JAKMIP1Q96N16 626 aaKnown RBP22.34■■□□□ 1.17
COL20A1-205ENST00000471582 HAUS7Q99871 368 aa22.34■■□□□ 1.17
COL20A1-205ENST00000471582 CIAO1O76071 339 aa22.33■■□□□ 1.17
COL20A1-205ENST00000471582 MEX3CQ5U5Q3 659 aaKnown RBP22.33■■□□□ 1.17
COL20A1-205ENST00000471582 ATG9AQ7Z3C6 839 aa22.33■■□□□ 1.17
COL20A1-205ENST00000471582 ZSCAN31Q96LW9 406 aaPredicted RBP22.33■■□□□ 1.17
COL20A1-205ENST00000471582 TCIRG1Q13488 830 aa22.33■■□□□ 1.16
COL20A1-205ENST00000471582 SYTL4Q96C24 671 aaPredicted RBP22.33■■□□□ 1.16
COL20A1-205ENST00000471582 DBNDD2Q9BQY9 259 aa22.33■■□□□ 1.16
COL20A1-205ENST00000471582 SH2B1Q9NRF2 756 aaPredicted RBP22.33■■□□□ 1.16
COL20A1-205ENST00000471582 PDRG1Q9NUG6 133 aa22.33■■□□□ 1.16
COL20A1-205ENST00000471582 PSMA5P28066 241 aa22.32■■□□□ 1.16
COL20A1-205ENST00000471582 KCNJ4P48050 445 aa22.32■■□□□ 1.16
COL20A1-205ENST00000471582 ADCK5Q3MIX3 580 aa22.32■■□□□ 1.16
COL20A1-205ENST00000471582 HMG20BQ9P0W2 317 aa22.32■■□□□ 1.16
COL20A1-205ENST00000471582 CHMP3Q9Y3E7 222 aa22.32■■□□□ 1.16
COL20A1-205ENST00000471582 SLC27A2O14975 620 aa22.31■■□□□ 1.16
COL20A1-205ENST00000471582 PRPF40AO75400 957 aaKnown RBP22.31■■□□□ 1.16
COL20A1-205ENST00000471582 FAM98CQ17RN3 349 aaKnown RBP22.31■■□□□ 1.16
COL20A1-205ENST00000471582 TSGA10IPQ3SY00 556 aa22.31■■□□□ 1.16
COL20A1-205ENST00000471582 DNAJC10Q8IXB1 793 aa22.31■■□□□ 1.16
COL20A1-205ENST00000471582 EYA2O00167 538 aa22.3■■□□□ 1.16
COL20A1-205ENST00000471582 ZNF445P59923 1031 aa22.3■■□□□ 1.16
COL20A1-205ENST00000471582 GAS2L3Q86XJ1 694 aa22.3■■□□□ 1.16
COL20A1-205ENST00000471582 MARCH10Q8NA82 808 aaPredicted RBP22.3■■□□□ 1.16
COL20A1-205ENST00000471582 FBXO3Q9UK99 471 aa22.3■■□□□ 1.16
COL20A1-205ENST00000471582 ZNF609O15014 1411 aa22.29■■□□□ 1.16
COL20A1-205ENST00000471582 USPL1Q5W0Q7 1092 aa22.29■■□□□ 1.16
COL20A1-205ENST00000471582 KIF6Q6ZMV9 814 aa22.29■■□□□ 1.16
COL20A1-205ENST00000471582 ARXQ96QS3 562 aa22.29■■□□□ 1.16
COL20A1-205ENST00000471582 PALLDQ8WX93 1383 aa22.29■■□□□ 1.16
COL20A1-205ENST00000471582 TAF5LO75529 589 aa22.29■■□□□ 1.16
COL20A1-205ENST00000471582 MBD3O95983 291 aa22.29■■□□□ 1.16
COL20A1-205ENST00000471582 PRIM1P49642 420 aaKnown RBP22.29■■□□□ 1.16
COL20A1-205ENST00000471582 ALDH8A1Q9H2A2 487 aaPredicted RBP22.29■■□□□ 1.16
COL20A1-205ENST00000471582 SPEF2Q9C093 1822 aa22.29■■□□□ 1.16
COL20A1-205ENST00000471582 ZNF589Q86UQ0 364 aaPredicted RBP22.28■■□□□ 1.16
COL20A1-205ENST00000471582 EDC3Q96F86 508 aaKnown RBP22.28■■□□□ 1.16
COL20A1-205ENST00000471582 PLA2G12BQ9BX93 195 aa22.28■■□□□ 1.16
COL20A1-205ENST00000471582 PCCAP05165 728 aaPredicted RBP22.27■■□□□ 1.16
COL20A1-205ENST00000471582 CPA1P15085 419 aa22.27■■□□□ 1.16
COL20A1-205ENST00000471582 KBTBD3Q8NAB2 608 aa22.27■■□□□ 1.16
COL20A1-205ENST00000471582 PANK2Q9BZ23 570 aa22.27■■□□□ 1.16
COL20A1-205ENST00000471582 GPT2Q8TD30 523 aa22.27■■□□□ 1.16
COL20A1-205ENST00000471582 ZNF330Q9Y3S2 320 aaPredicted RBP22.27■■□□□ 1.16
COL20A1-205ENST00000471582 THSD7AQ9UPZ6 1657 aa22.26■■□□□ 1.15
COL20A1-205ENST00000471582 AFF2P51816 1311 aa22.26■■□□□ 1.15
COL20A1-205ENST00000471582 SH3TC1Q8TE82 1336 aa22.26■■□□□ 1.15
COL20A1-205ENST00000471582 KRT32Q14532 448 aa22.26■■□□□ 1.15
COL20A1-205ENST00000471582 ANKRD1Q15327 319 aa22.26■■□□□ 1.15
COL20A1-205ENST00000471582 CAVIN1Q6NZI2 390 aaKnown RBP22.26■■□□□ 1.15
COL20A1-205ENST00000471582 FBXO41Q8TF61 875 aa22.26■■□□□ 1.15
COL20A1-205ENST00000471582 DNAJC2Q99543 621 aaKnown RBP22.26■■□□□ 1.15
COL20A1-205ENST00000471582 SMC3Q9UQE7 1217 aa22.26■■□□□ 1.15
COL20A1-205ENST00000471582 MAP3K15Q6ZN16 1313 aa22.26■■□□□ 1.15
COL20A1-205ENST00000471582 ZSCAN23Q3MJ62 389 aa22.25■■□□□ 1.15
COL20A1-205ENST00000471582 FOXD4L5Q5VV16 416 aaPredicted RBP22.25■■□□□ 1.15
COL20A1-205ENST00000471582 FOXD4L4Q8WXT5 416 aaPredicted RBP22.25■■□□□ 1.15
COL20A1-205ENST00000471582 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.25■■□□□ 1.15
COL20A1-205ENST00000471582 PDIA4P13667 645 aaKnown RBP22.24■■□□□ 1.15
COL20A1-205ENST00000471582 NCLP19338 710 aaKnown RBP22.24■■□□□ 1.15
COL20A1-205ENST00000471582 MCMDC2Q4G0Z9 681 aa22.24■■□□□ 1.15
COL20A1-205ENST00000471582 BLOC1S2Q6QNY1 142 aa22.24■■□□□ 1.15
COL20A1-205ENST00000471582 GIGYF2Q6Y7W6 1299 aaKnown RBP22.24■■□□□ 1.15
COL20A1-205ENST00000471582 FAM43AQ8N2R8 423 aa22.24■■□□□ 1.15
COL20A1-205ENST00000471582 ZBTB38Q8NAP3 1195 aaPredicted RBP22.24■■□□□ 1.15
COL20A1-205ENST00000471582 U3KPZ7 1027 aaPredicted RBP22.24■■□□□ 1.15
COL20A1-205ENST00000471582 CDHR2Q9BYE9 1310 aa22.24■■□□□ 1.15
COL20A1-205ENST00000471582 LARGE1O95461 756 aa22.23■■□□□ 1.15
COL20A1-205ENST00000471582 ZSCAN22P10073 491 aaPredicted RBP22.23■■□□□ 1.15
COL20A1-205ENST00000471582 CCDC57Q2TAC2 916 aa22.23■■□□□ 1.15
COL20A1-205ENST00000471582 LRRC24Q50LG9 513 aa22.23■■□□□ 1.15
COL20A1-205ENST00000471582 HSP90AB3PQ58FF7 597 aa22.23■■□□□ 1.15
COL20A1-205ENST00000471582 NEUROD6Q96NK8 337 aa22.23■■□□□ 1.15
COL20A1-205ENST00000471582 STX6O43752 255 aa22.23■■□□□ 1.15
COL20A1-205ENST00000471582 CYP19A1P11511 503 aaPredicted RBP22.23■■□□□ 1.15
COL20A1-205ENST00000471582 RPS6KB1P23443 525 aa22.23■■□□□ 1.15
COL20A1-205ENST00000471582 PAG1Q9NWQ8 432 aa22.23■■□□□ 1.15
COL20A1-205ENST00000471582 ANKRD36CQ5JPF3 1778 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms