RNA–Protein interactions for RNA: ENST00000471358.1

PCBP4-209, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-209ENST00000471358 MPNDQ8N594 471 aa22.21■■□□□ 1.15
PCBP4-209ENST00000471358 C8orf58Q8NAV2 365 aa22.21■■□□□ 1.15
PCBP4-209ENST00000471358 PHAXQ9H814 394 aaKnown RBP22.21■■□□□ 1.15
PCBP4-209ENST00000471358 CALD1Q05682 793 aaKnown RBP22.2■■□□□ 1.14
PCBP4-209ENST00000471358 SUPT20HQ8NEM7 779 aa22.2■■□□□ 1.14
PCBP4-209ENST00000471358 VPS33BQ9H267 617 aa22.2■■□□□ 1.14
PCBP4-209ENST00000471358 TAF1P21675 1872 aa22.2■■□□□ 1.14
PCBP4-209ENST00000471358 TMEM88BA6NKF7 163 aa22.19■■□□□ 1.14
PCBP4-209ENST00000471358 LMOD1P29536 600 aaPredicted RBP22.19■■□□□ 1.14
PCBP4-209ENST00000471358 CXCL9Q07325 125 aa22.19■■□□□ 1.14
PCBP4-209ENST00000471358 TRIM28Q13263 835 aaKnown RBP22.19■■□□□ 1.14
PCBP4-209ENST00000471358 RIC3Q7Z5B4 369 aa22.19■■□□□ 1.14
PCBP4-209ENST00000471358 ZNRF3Q9ULT6 936 aa22.19■■□□□ 1.14
PCBP4-209ENST00000471358 LTBP1Q14766 1721 aa22.19■■□□□ 1.14
PCBP4-209ENST00000471358 ADAMTSL1Q8N6G6 1762 aa22.19■■□□□ 1.14
PCBP4-209ENST00000471358 SF3B3Q15393 1217 aaKnown RBP22.18■■□□□ 1.14
PCBP4-209ENST00000471358 CELF1Q92879 486 aaKnown RBP22.17■■□□□ 1.14
PCBP4-209ENST00000471358 CNTNAP1P78357 1384 aa22.16■■□□□ 1.14
PCBP4-209ENST00000471358 IRS4O14654 1257 aaPredicted RBP22.16■■□□□ 1.14
PCBP4-209ENST00000471358 GOLGA2Q08379 1002 aa22.16■■□□□ 1.14
PCBP4-209ENST00000471358 KIAA2012Q0VF49 1180 aa22.16■■□□□ 1.14
PCBP4-209ENST00000471358 FMR1Q06787 632 aaKnown RBP eCLIP22.15■■□□□ 1.14
PCBP4-209ENST00000471358 TSPYL6Q8N831 410 aa22.15■■□□□ 1.14
PCBP4-209ENST00000471358 MYD88Q99836 296 aa22.15■■□□□ 1.14
PCBP4-209ENST00000471358 GPRC5DQ9NZD1 345 aa22.15■■□□□ 1.14
PCBP4-209ENST00000471358 DDX60Q8IY21 1712 aaKnown RBP22.14■■□□□ 1.14
PCBP4-209ENST00000471358 RAD17O75943 681 aa22.14■■□□□ 1.13
PCBP4-209ENST00000471358 VEGFBP49765 207 aa22.14■■□□□ 1.13
PCBP4-209ENST00000471358 GMPSP49915 693 aaPredicted RBP22.14■■□□□ 1.13
PCBP4-209ENST00000471358 TMC4Q7Z404 712 aa22.14■■□□□ 1.13
PCBP4-209ENST00000471358 YDJCA8MPS7 323 aa22.13■■□□□ 1.13
PCBP4-209ENST00000471358 CIAPIN1Q6FI81 312 aa22.13■■□□□ 1.13
PCBP4-209ENST00000471358 USP50Q70EL3 339 aaPredicted RBP22.13■■□□□ 1.13
PCBP4-209ENST00000471358 JARID2Q92833 1246 aaPredicted RBP22.13■■□□□ 1.13
PCBP4-209ENST00000471358 TSR2Q969E8 191 aaKnown RBP22.13■■□□□ 1.13
PCBP4-209ENST00000471358 NSFL1CQ9UNZ2 370 aaKnown RBP22.13■■□□□ 1.13
PCBP4-209ENST00000471358 COL4A1P02462 1669 aa22.12■■□□□ 1.13
PCBP4-209ENST00000471358 ZBTB38Q8NAP3 1195 aaPredicted RBP22.12■■□□□ 1.13
PCBP4-209ENST00000471358 GPSM2P81274 684 aa22.11■■□□□ 1.13
PCBP4-209ENST00000471358 CCDC30Q5VVM6 783 aa22.11■■□□□ 1.13
PCBP4-209ENST00000471358 ADARB2Q9NS39 739 aaKnown RBP22.11■■□□□ 1.13
PCBP4-209ENST00000471358 TRAF5O00463 557 aa22.1■■□□□ 1.13
PCBP4-209ENST00000471358 RPS8P62241 208 aaKnown RBP22.1■■□□□ 1.13
PCBP4-209ENST00000471358 SEC31BQ9NQW1 1179 aa22.1■■□□□ 1.13
PCBP4-209ENST00000471358 DUOX1Q9NRD9 1551 aa22.1■■□□□ 1.13
PCBP4-209ENST00000471358 POLLQ9UGP5 575 aa22.1■■□□□ 1.13
PCBP4-209ENST00000471358 C6orf229H3BNL8 230 aa22.09■■□□□ 1.13
PCBP4-209ENST00000471358 RIMBP2O15034 1052 aa22.09■■□□□ 1.13
PCBP4-209ENST00000471358 TNIP1Q15025 636 aa22.09■■□□□ 1.13
PCBP4-209ENST00000471358 WASHC4Q2M389 1173 aa22.09■■□□□ 1.13
PCBP4-209ENST00000471358 WWC1Q8IX03 1113 aa22.09■■□□□ 1.13
PCBP4-209ENST00000471358 CCDC191Q8NCU4 936 aa22.09■■□□□ 1.13
PCBP4-209ENST00000471358 METTL22Q9BUU2 404 aaPredicted RBP22.09■■□□□ 1.13
PCBP4-209ENST00000471358 BCL2L13Q9BXK5 485 aa22.09■■□□□ 1.13
PCBP4-209ENST00000471358 SHTN1A0MZ66 631 aa22.08■■□□□ 1.13
PCBP4-209ENST00000471358 RASSF10A6NK89 507 aa22.08■■□□□ 1.13
PCBP4-209ENST00000471358 DEFB115Q30KQ5 88 aa22.08■■□□□ 1.13
PCBP4-209ENST00000471358 TNS4Q8IZW8 715 aa22.08■■□□□ 1.13
PCBP4-209ENST00000471358 GPR101Q96P66 508 aaPredicted RBP22.08■■□□□ 1.13
PCBP4-209ENST00000471358 CWC25Q9NXE8 425 aaPredicted RBP22.08■■□□□ 1.13
PCBP4-209ENST00000471358 MAP3K2Q9Y2U5 619 aa22.08■■□□□ 1.13
PCBP4-209ENST00000471358 LRRC37AA6NMS7 1700 aa22.07■■□□□ 1.12
PCBP4-209ENST00000471358 DDX58O95786 925 aaKnown RBP22.07■■□□□ 1.12
PCBP4-209ENST00000471358 PCCAP05165 728 aaPredicted RBP22.07■■□□□ 1.12
PCBP4-209ENST00000471358 HIRAP54198 1017 aaPredicted RBP22.07■■□□□ 1.12
PCBP4-209ENST00000471358 CCDC27Q2M243 656 aa22.07■■□□□ 1.12
PCBP4-209ENST00000471358 CST9Q5W186 159 aa22.07■■□□□ 1.12
PCBP4-209ENST00000471358 CCDC85AQ96PX6 553 aaPredicted RBP22.07■■□□□ 1.12
PCBP4-209ENST00000471358 DBNDD1Q9H9R9 158 aa22.07■■□□□ 1.12
PCBP4-209ENST00000471358 ABT1Q9ULW3 272 aaKnown RBP22.07■■□□□ 1.12
PCBP4-209ENST00000471358 FOXN1O15353 648 aa22.06■■□□□ 1.12
PCBP4-209ENST00000471358 TBC1D16Q8TBP0 767 aa22.06■■□□□ 1.12
PCBP4-209ENST00000471358 KCNQ5Q9NR82 932 aa22.06■■□□□ 1.12
PCBP4-209ENST00000471358 CNOT7Q9UIV1 285 aaKnown RBP22.06■■□□□ 1.12
PCBP4-209ENST00000471358 ZBTB12Q9Y330 459 aaPredicted RBP22.06■■□□□ 1.12
PCBP4-209ENST00000471358 PI4KAP2A4QPH2 592 aa22.05■■□□□ 1.12
PCBP4-209ENST00000471358 PDE8AO60658 829 aa22.05■■□□□ 1.12
PCBP4-209ENST00000471358 DOK7Q18PE1 504 aa22.05■■□□□ 1.12
PCBP4-209ENST00000471358 KSR2Q6VAB6 950 aa22.05■■□□□ 1.12
PCBP4-209ENST00000471358 PI4KAP1Q8N8J0 262 aa22.05■■□□□ 1.12
PCBP4-209ENST00000471358 TRPM4Q8TD43 1214 aa22.05■■□□□ 1.12
PCBP4-209ENST00000471358 CHMP4AQ9BY43 222 aa22.05■■□□□ 1.12
PCBP4-209ENST00000471358 MRS2Q9HD23 443 aa22.05■■□□□ 1.12
PCBP4-209ENST00000471358 PSMD14O00487 310 aa22.04■■□□□ 1.12
PCBP4-209ENST00000471358 IGKV5-2P06315 115 aa22.04■■□□□ 1.12
PCBP4-209ENST00000471358 HSP90B1P14625 803 aaKnown RBP22.04■■□□□ 1.12
PCBP4-209ENST00000471358 G2E3Q7L622 706 aa22.04■■□□□ 1.12
PCBP4-209ENST00000471358 PGAP2Q9UHJ9 254 aa22.04■■□□□ 1.12
PCBP4-209ENST00000471358 TWISTNBQ3B726 338 aaPredicted RBP22.03■■□□□ 1.12
PCBP4-209ENST00000471358 CCDC152Q4G0S7 254 aa22.03■■□□□ 1.12
PCBP4-209ENST00000471358 GLIS2Q9BZE0 524 aaPredicted RBP22.03■■□□□ 1.12
PCBP4-209ENST00000471358 CDHR2Q9BYE9 1310 aa22.03■■□□□ 1.12
PCBP4-209ENST00000471358 WDR33Q9C0J8 1336 aaKnown RBP22.03■■□□□ 1.12
PCBP4-209ENST00000471358 ECE2O60344 883 aa22.02■■□□□ 1.12
PCBP4-209ENST00000471358 CAPN15O75808 1086 aa22.02■■□□□ 1.12
PCBP4-209ENST00000471358 ZEB1P37275 1124 aaPredicted RBP22.02■■□□□ 1.12
PCBP4-209ENST00000471358 MICALL2Q8IY33 904 aa22.02■■□□□ 1.12
PCBP4-209ENST00000471358 EYA3Q99504 573 aa22.02■■□□□ 1.12
PCBP4-209ENST00000471358 STK31Q9BXU1 1019 aa22.02■■□□□ 1.12
PCBP4-209ENST00000471358 WBP1LQ9NX94 342 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms