RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 CC2D2BQ6DHV5 1058 aa19.29■□□□□ 0.68
ABCF3-208ENST00000471226 ZNF784Q8NCA9 323 aaPredicted RBP19.29■□□□□ 0.68
ABCF3-208ENST00000471226 SMC4Q9NTJ3 1288 aa19.29■□□□□ 0.68
ABCF3-208ENST00000471226 COL4A1P02462 1669 aa19.28■□□□□ 0.68
ABCF3-208ENST00000471226 GRAPQ13588 217 aa19.28■□□□□ 0.68
ABCF3-208ENST00000471226 RTKN2Q8IZC4 609 aa19.28■□□□□ 0.68
ABCF3-208ENST00000471226 GRAPLQ8TC17 118 aaPredicted RBP19.28■□□□□ 0.68
ABCF3-208ENST00000471226 TAOK3Q9H2K8 898 aa19.28■□□□□ 0.68
ABCF3-208ENST00000471226 RNF181Q9P0P0 153 aa19.28■□□□□ 0.68
ABCF3-208ENST00000471226 LRRC37AA6NMS7 1700 aa19.28■□□□□ 0.68
ABCF3-208ENST00000471226 TIAM2Q8IVF5 1701 aa19.28■□□□□ 0.68
ABCF3-208ENST00000471226 ALDH1L1O75891 902 aa19.27■□□□□ 0.68
ABCF3-208ENST00000471226 UBE3BQ7Z3V4 1068 aa19.27■□□□□ 0.68
ABCF3-208ENST00000471226 PLA2G12BQ9BX93 195 aa19.27■□□□□ 0.68
ABCF3-208ENST00000471226 ATP6V0A2Q9Y487 856 aa19.27■□□□□ 0.68
ABCF3-208ENST00000471226 FKBP4Q02790 459 aaKnown RBP eCLIP19.26■□□□□ 0.67
ABCF3-208ENST00000471226 GRIPAP1Q4V328 841 aa19.26■□□□□ 0.67
ABCF3-208ENST00000471226 SLC4A10Q6U841 1118 aa19.26■□□□□ 0.67
ABCF3-208ENST00000471226 SP8Q8IXZ3 490 aa19.26■□□□□ 0.67
ABCF3-208ENST00000471226 CTSWP56202 376 aa19.25■□□□□ 0.67
ABCF3-208ENST00000471226 CCDC152Q4G0S7 254 aa19.25■□□□□ 0.67
ABCF3-208ENST00000471226 TMC4Q7Z404 712 aa19.25■□□□□ 0.67
ABCF3-208ENST00000471226 SLC51AQ86UW1 340 aa19.25■□□□□ 0.67
ABCF3-208ENST00000471226 TTLL11Q8NHH1 800 aa19.25■□□□□ 0.67
ABCF3-208ENST00000471226 CELF1Q92879 486 aaKnown RBP19.25■□□□□ 0.67
ABCF3-208ENST00000471226 PSMD1Q99460 953 aa19.25■□□□□ 0.67
ABCF3-208ENST00000471226 SRCIN1Q9C0H9 1055 aa19.25■□□□□ 0.67
ABCF3-208ENST00000471226 ZC3H4Q9UPT8 1303 aaKnown RBP19.25■□□□□ 0.67
ABCF3-208ENST00000471226 NOB1Q9ULX3 412 aaKnown RBP19.24■□□□□ 0.67
ABCF3-208ENST00000471226 GRM8O00222 908 aa19.23■□□□□ 0.67
ABCF3-208ENST00000471226 SEC31BQ9NQW1 1179 aa19.23■□□□□ 0.67
ABCF3-208ENST00000471226 RTL9Q8NET4 1388 aa19.22■□□□□ 0.67
ABCF3-208ENST00000471226 RPS8P62241 208 aaKnown RBP19.22■□□□□ 0.67
ABCF3-208ENST00000471226 SPEF2Q9C093 1822 aa19.22■□□□□ 0.67
ABCF3-208ENST00000471226 CSF1RP07333 972 aa19.21■□□□□ 0.67
ABCF3-208ENST00000471226 ARHGAP45Q92619 1136 aa19.21■□□□□ 0.67
ABCF3-208ENST00000471226 CCDC85AQ96PX6 553 aaPredicted RBP19.21■□□□□ 0.67
ABCF3-208ENST00000471226 TMX4Q9H1E5 349 aaPredicted RBP19.21■□□□□ 0.67
ABCF3-208ENST00000471226 ZNF277Q9NRM2 450 aaPredicted RBP19.21■□□□□ 0.67
ABCF3-208ENST00000471226 C9orf78Q9NZ63 289 aaPredicted RBP19.21■□□□□ 0.67
ABCF3-208ENST00000471226 UTYO14607 1347 aa19.21■□□□□ 0.67
ABCF3-208ENST00000471226 KIF16BQ96L93 1317 aa19.21■□□□□ 0.67
ABCF3-208ENST00000471226 LTBP1Q14766 1721 aa19.2■□□□□ 0.66
ABCF3-208ENST00000471226 FOXO4P98177 505 aa19.2■□□□□ 0.66
ABCF3-208ENST00000471226 RTFDC1Q9BY42 306 aaPredicted RBP19.2■□□□□ 0.66
ABCF3-208ENST00000471226 API5Q9BZZ5 524 aaKnown RBP19.2■□□□□ 0.66
ABCF3-208ENST00000471226 GREM2Q9H772 168 aa19.2■□□□□ 0.66
ABCF3-208ENST00000471226 BCAR3O75815 825 aa19.19■□□□□ 0.66
ABCF3-208ENST00000471226 IARSP41252 1262 aaKnown RBP19.19■□□□□ 0.66
ABCF3-208ENST00000471226 MPNDQ8N594 471 aa19.19■□□□□ 0.66
ABCF3-208ENST00000471226 DUOX1Q9NRD9 1551 aa19.19■□□□□ 0.66
ABCF3-208ENST00000471226 NBPF7P0C2Y1 421 aaPredicted RBP19.18■□□□□ 0.66
ABCF3-208ENST00000471226 EPHA10Q5JZY3 1008 aa19.17■□□□□ 0.66
ABCF3-208ENST00000471226 DPP8Q6V1X1 898 aaPredicted RBP19.17■□□□□ 0.66
ABCF3-208ENST00000471226 ANKRD18AQ8IVF6 992 aa19.17■□□□□ 0.66
ABCF3-208ENST00000471226 ZNF526Q8TF50 670 aaPredicted RBP19.17■□□□□ 0.66
ABCF3-208ENST00000471226 CDC5LQ99459 802 aaKnown RBP19.17■□□□□ 0.66
ABCF3-208ENST00000471226 USP44Q9H0E7 712 aa19.17■□□□□ 0.66
ABCF3-208ENST00000471226 VPS33BQ9H267 617 aa19.17■□□□□ 0.66
ABCF3-208ENST00000471226 GPBP1L1Q9HC44 474 aaPredicted RBP19.17■□□□□ 0.66
ABCF3-208ENST00000471226 COL4A5P29400 1685 aa19.17■□□□□ 0.66
ABCF3-208ENST00000471226 CCT4P50991 539 aaKnown RBP19.16■□□□□ 0.66
ABCF3-208ENST00000471226 SUPT20HQ8NEM7 779 aa19.16■□□□□ 0.66
ABCF3-208ENST00000471226 KAZALD1Q96I82 304 aa19.16■□□□□ 0.66
ABCF3-208ENST00000471226 GLTPD2A6NH11 291 aa19.15■□□□□ 0.66
ABCF3-208ENST00000471226 IPO8O15397 1037 aaKnown RBP19.15■□□□□ 0.66
ABCF3-208ENST00000471226 ITGA6P23229 1130 aa19.15■□□□□ 0.66
ABCF3-208ENST00000471226 FAM161AQ3B820 660 aa19.15■□□□□ 0.66
ABCF3-208ENST00000471226 SUCLG2Q96I99 432 aa19.15■□□□□ 0.66
ABCF3-208ENST00000471226 PODXL2Q9NZ53 605 aa19.15■□□□□ 0.66
ABCF3-208ENST00000471226 GPSM2P81274 684 aa19.14■□□□□ 0.65
ABCF3-208ENST00000471226 LMBR1LQ6UX01 489 aa19.14■□□□□ 0.65
ABCF3-208ENST00000471226 BSDC1Q9NW68 430 aaPredicted RBP19.14■□□□□ 0.65
ABCF3-208ENST00000471226 NSFL1CQ9UNZ2 370 aaKnown RBP19.14■□□□□ 0.65
ABCF3-208ENST00000471226 KDM2BQ8NHM5 1336 aa19.14■□□□□ 0.65
ABCF3-208ENST00000471226 WDR90Q96KV7 1748 aa19.14■□□□□ 0.65
ABCF3-208ENST00000471226 FZD9O00144 591 aa19.13■□□□□ 0.65
ABCF3-208ENST00000471226 TRIM27P14373 513 aa19.13■□□□□ 0.65
ABCF3-208ENST00000471226 INTS3Q68E01 1043 aaKnown RBP19.13■□□□□ 0.65
ABCF3-208ENST00000471226 ATF7IPQ6VMQ6 1270 aa19.13■□□□□ 0.65
ABCF3-208ENST00000471226 A0A1B0GUL6 1792 aa19.12■□□□□ 0.65
ABCF3-208ENST00000471226 ANKRD18BA2A2Z9 1011 aa19.12■□□□□ 0.65
ABCF3-208ENST00000471226 PPIP5K2O43314 1243 aa19.12■□□□□ 0.65
ABCF3-208ENST00000471226 KIAA2012Q0VF49 1180 aa19.12■□□□□ 0.65
ABCF3-208ENST00000471226 AOC3Q16853 763 aa19.12■□□□□ 0.65
ABCF3-208ENST00000471226 DPY19L2Q6NUT2 758 aa19.12■□□□□ 0.65
ABCF3-208ENST00000471226 LARGE2Q8N3Y3 721 aa19.12■□□□□ 0.65
ABCF3-208ENST00000471226 JDP2Q8WYK2 163 aa19.12■□□□□ 0.65
ABCF3-208ENST00000471226 FRAT1Q92837 279 aaPredicted RBP19.12■□□□□ 0.65
ABCF3-208ENST00000471226 POLLQ9UGP5 575 aa19.12■□□□□ 0.65
ABCF3-208ENST00000471226 KIF3CO14782 793 aa19.11■□□□□ 0.65
ABCF3-208ENST00000471226 IGHMBP2P38935 993 aaKnown RBP19.11■□□□□ 0.65
ABCF3-208ENST00000471226 IFIT5Q13325 482 aaKnown RBP19.11■□□□□ 0.65
ABCF3-208ENST00000471226 RABL6Q3YEC7 729 aaPredicted RBP19.11■□□□□ 0.65
ABCF3-208ENST00000471226 TBC1D16Q8TBP0 767 aa19.11■□□□□ 0.65
ABCF3-208ENST00000471226 NMRK2Q9NPI5 230 aa19.11■□□□□ 0.65
ABCF3-208ENST00000471226 MINPP1Q9UNW1 487 aa19.11■□□□□ 0.65
ABCF3-208ENST00000471226 TNNQ9UQP3 1299 aa19.11■□□□□ 0.65
ABCF3-208ENST00000471226 ZKSCAN2Q63HK3 967 aa19.1■□□□□ 0.65
ABCF3-208ENST00000471226 BICC1Q9H694 974 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms