RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 PPP1R26Q5T8A7 1209 aaPredicted RBP8.16□□□□□ -1.1
CHD6-206ENST00000470470 IPO9Q96P70 1041 aaKnown RBP8.16□□□□□ -1.1
CHD6-206ENST00000470470 AATKQ6ZMQ8 1374 aa8.16□□□□□ -1.1
CHD6-206ENST00000470470 BCAR3O75815 825 aa8.15□□□□□ -1.1
CHD6-206ENST00000470470 USP17L8P0C7I0 530 aa8.15□□□□□ -1.1
CHD6-206ENST00000470470 U2AF1L5P0DN76 240 aaPredicted RBP8.15□□□□□ -1.1
CHD6-206ENST00000470470 ANP32AP39687 249 aaKnown RBP8.15□□□□□ -1.1
CHD6-206ENST00000470470 TMPOP42166 694 aaKnown RBP8.15□□□□□ -1.1
CHD6-206ENST00000470470 TNNT2P45379 298 aaPredicted RBP8.15□□□□□ -1.1
CHD6-206ENST00000470470 MARSP56192 900 aaKnown RBP8.15□□□□□ -1.1
CHD6-206ENST00000470470 U2AF1Q01081 240 aaKnown RBP eCLIP8.15□□□□□ -1.1
CHD6-206ENST00000470470 SAFB2Q14151 953 aaKnown RBP eCLIP8.15□□□□□ -1.1
CHD6-206ENST00000470470 MCM6Q14566 821 aa8.15□□□□□ -1.1
CHD6-206ENST00000470470 SCARF2Q96GP6 870 aaPredicted RBP8.15□□□□□ -1.1
CHD6-206ENST00000470470 ESF1Q9H501 851 aaKnown RBP8.15□□□□□ -1.1
CHD6-206ENST00000470470 CABP1Q9NZU7 370 aa8.15□□□□□ -1.1
CHD6-206ENST00000470470 TMEM2Q9UHN6 1383 aa8.15□□□□□ -1.11
CHD6-206ENST00000470470 ITSN1Q15811 1721 aa8.14□□□□□ -1.11
CHD6-206ENST00000470470 VIRMAQ69YN4 1812 aaKnown RBP8.14□□□□□ -1.11
CHD6-206ENST00000470470 FIGNL2A6NMB9 653 aa8.14□□□□□ -1.11
CHD6-206ENST00000470470 RAD21O60216 631 aa8.14□□□□□ -1.11
CHD6-206ENST00000470470 DIAPH1O60610 1272 aaKnown RBP8.14□□□□□ -1.11
CHD6-206ENST00000470470 ITGA6P23229 1130 aa8.14□□□□□ -1.11
CHD6-206ENST00000470470 DHX9Q08211 1270 aaKnown RBP8.14□□□□□ -1.11
CHD6-206ENST00000470470 RNFT1Q5M7Z0 435 aa8.14□□□□□ -1.11
CHD6-206ENST00000470470 GGNBP2Q9H3C7 697 aa8.14□□□□□ -1.11
CHD6-206ENST00000470470 C3P01024 1663 aa8.14□□□□□ -1.11
CHD6-206ENST00000470470 METP08581 1390 aa8.14□□□□□ -1.11
CHD6-206ENST00000470470 WAPLQ7Z5K2 1190 aa8.13□□□□□ -1.11
CHD6-206ENST00000470470 WHAMMQ8TF30 809 aa8.13□□□□□ -1.11
CHD6-206ENST00000470470 NOP58Q9Y2X3 529 aaKnown RBP8.13□□□□□ -1.11
CHD6-206ENST00000470470 PLEKHG1Q9ULL1 1385 aa8.13□□□□□ -1.11
CHD6-206ENST00000470470 ADAMTS13Q76LX8 1427 aa8.13□□□□□ -1.11
CHD6-206ENST00000470470 ARHGAP23Q9P227 1491 aa8.13□□□□□ -1.11
CHD6-206ENST00000470470 SLIT1O75093 1534 aa8.13□□□□□ -1.11
CHD6-206ENST00000470470 TOPAZ1Q8N9V7 1692 aa8.12□□□□□ -1.11
CHD6-206ENST00000470470 SOCS7O14512 581 aa8.12□□□□□ -1.11
CHD6-206ENST00000470470 CBLBQ13191 982 aa8.12□□□□□ -1.11
CHD6-206ENST00000470470 PDXDC2PQ6P474 469 aa8.12□□□□□ -1.11
CHD6-206ENST00000470470 SV2AQ7L0J3 742 aa8.12□□□□□ -1.11
CHD6-206ENST00000470470 ZNF428Q96B54 188 aa8.12□□□□□ -1.11
CHD6-206ENST00000470470 SLC10A4Q96EP9 437 aa8.12□□□□□ -1.11
CHD6-206ENST00000470470 PPIP5K1Q6PFW1 1433 aa8.12□□□□□ -1.11
CHD6-206ENST00000470470 CDK12Q9NYV4 1490 aaPredicted RBP8.12□□□□□ -1.11
CHD6-206ENST00000470470 MSTNO14793 375 aa8.11□□□□□ -1.11
CHD6-206ENST00000470470 MLECQ14165 292 aa8.11□□□□□ -1.11
CHD6-206ENST00000470470 PNMA1Q8ND90 353 aa8.11□□□□□ -1.11
CHD6-206ENST00000470470 PMFBP1Q8TBY8 1022 aa8.11□□□□□ -1.11
CHD6-206ENST00000470470 CLUAP1Q96AJ1 413 aa8.11□□□□□ -1.11
CHD6-206ENST00000470470 NUDT16Q96DE0 195 aaKnown RBP8.11□□□□□ -1.11
CHD6-206ENST00000470470 KCTD15Q96SI1 283 aaPredicted RBP8.11□□□□□ -1.11
CHD6-206ENST00000470470 POLKQ9UBT6 870 aa8.11□□□□□ -1.11
CHD6-206ENST00000470470 RRP7AQ9Y3A4 280 aaKnown RBP8.11□□□□□ -1.11
CHD6-206ENST00000470470 MAPK8IP3Q9UPT6 1336 aa8.11□□□□□ -1.11
CHD6-206ENST00000470470 ZC3H4Q9UPT8 1303 aaKnown RBP8.11□□□□□ -1.11
CHD6-206ENST00000470470 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.11□□□□□ -1.11
CHD6-206ENST00000470470 CDC14CA4D256 554 aa8.1□□□□□ -1.11
CHD6-206ENST00000470470 CTDSPL2Q05D32 466 aa8.1□□□□□ -1.11
CHD6-206ENST00000470470 ARHGAP9Q9BRR9 750 aa8.1□□□□□ -1.11
CHD6-206ENST00000470470 DIP2AQ14689 1571 aa8.1□□□□□ -1.11
CHD6-206ENST00000470470 RIMS1Q86UR5 1692 aaKnown RBP8.09□□□□□ -1.11
CHD6-206ENST00000470470 NRKQ7Z2Y5 1582 aa8.09□□□□□ -1.11
CHD6-206ENST00000470470 U2SURPO15042 1029 aaKnown RBP8.09□□□□□ -1.11
CHD6-206ENST00000470470 IL13P35225 146 aa8.09□□□□□ -1.11
CHD6-206ENST00000470470 CALD1Q05682 793 aaKnown RBP8.09□□□□□ -1.11
CHD6-206ENST00000470470 ALDH1L2Q3SY69 923 aa8.09□□□□□ -1.11
CHD6-206ENST00000470470 ZKSCAN2Q63HK3 967 aa8.09□□□□□ -1.11
CHD6-206ENST00000470470 VWA5B2Q8N398 1253 aa8.09□□□□□ -1.11
CHD6-206ENST00000470470 SNRKQ9NRH2 765 aa8.09□□□□□ -1.11
CHD6-206ENST00000470470 TBX22Q9Y458 520 aa8.09□□□□□ -1.11
CHD6-206ENST00000470470 DLG5Q8TDM6 1919 aa8.09□□□□□ -1.11
CHD6-206ENST00000470470 NALCNQ8IZF0 1738 aa8.09□□□□□ -1.11
CHD6-206ENST00000470470 LRRC7Q96NW7 1537 aa8.09□□□□□ -1.12
CHD6-206ENST00000470470 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.08□□□□□ -1.12
CHD6-206ENST00000470470 IGHDP01880 384 aa8.08□□□□□ -1.12
CHD6-206ENST00000470470 CTSOP43234 321 aaPredicted RBP8.08□□□□□ -1.12
CHD6-206ENST00000470470 RIPK4P57078 832 aa8.08□□□□□ -1.12
CHD6-206ENST00000470470 NFE2L2Q16236 605 aa8.08□□□□□ -1.12
CHD6-206ENST00000470470 TXNDC2Q86VQ3 553 aa8.08□□□□□ -1.12
CHD6-206ENST00000470470 RNF217Q8TC41 542 aa8.08□□□□□ -1.12
CHD6-206ENST00000470470 PANK1Q8TE04 598 aa8.08□□□□□ -1.12
CHD6-206ENST00000470470 PSMG3-AS1Q96PY0 264 aa8.08□□□□□ -1.12
CHD6-206ENST00000470470 KRTAP9-2Q9BYQ4 174 aa8.08□□□□□ -1.12
CHD6-206ENST00000470470 ZMYND15Q9H091 742 aa8.08□□□□□ -1.12
CHD6-206ENST00000470470 FKBPLQ9UIM3 349 aa8.08□□□□□ -1.12
CHD6-206ENST00000470470 ROBO2Q9HCK4 1378 aa8.08□□□□□ -1.12
CHD6-206ENST00000470470 NEFMP07197 916 aa8.07□□□□□ -1.12
CHD6-206ENST00000470470 CANXP27824 592 aaKnown RBP8.07□□□□□ -1.12
CHD6-206ENST00000470470 EXOSC9Q06265 439 aaKnown RBP8.07□□□□□ -1.12
CHD6-206ENST00000470470 MVPQ14764 893 aaKnown RBP8.07□□□□□ -1.12
CHD6-206ENST00000470470 C8orf34Q49A92 452 aa8.07□□□□□ -1.12
CHD6-206ENST00000470470 INTS6LQ5JSJ4 861 aaKnown RBP8.07□□□□□ -1.12
CHD6-206ENST00000470470 MTMR14Q8NCE2 650 aa8.07□□□□□ -1.12
CHD6-206ENST00000470470 COG3Q96JB2 828 aa8.07□□□□□ -1.12
CHD6-206ENST00000470470 SPOCK3Q9BQ16 436 aa8.07□□□□□ -1.12
CHD6-206ENST00000470470 COG6Q9Y2V7 657 aa8.07□□□□□ -1.12
CHD6-206ENST00000470470 NDUFB9Q9Y6M9 179 aa8.07□□□□□ -1.12
CHD6-206ENST00000470470 FER1L4A9Z1Z3 1794 aa8.07□□□□□ -1.12
CHD6-206ENST00000470470 SSH2Q76I76 1423 aa8.07□□□□□ -1.12
CHD6-206ENST00000470470 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms