RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 PDE8AO60658 829 aa18.05■□□□□ 0.48
TOP3B-215ENST00000470338 SLC51AQ86UW1 340 aa18.05■□□□□ 0.48
TOP3B-215ENST00000470338 SP8Q8IXZ3 490 aa18.05■□□□□ 0.48
TOP3B-215ENST00000470338 LINS1Q8NG48 757 aa18.05■□□□□ 0.48
TOP3B-215ENST00000470338 JARID2Q92833 1246 aaPredicted RBP18.05■□□□□ 0.48
TOP3B-215ENST00000470338 ZNF277Q9NRM2 450 aaPredicted RBP18.05■□□□□ 0.48
TOP3B-215ENST00000470338 LRRC37AA6NMS7 1700 aa18.04■□□□□ 0.48
TOP3B-215ENST00000470338 H7C1W4 665 aa18.04■□□□□ 0.48
TOP3B-215ENST00000470338 C1QTNF8P60827 252 aa18.04■□□□□ 0.48
TOP3B-215ENST00000470338 GCKRQ14397 625 aa18.04■□□□□ 0.48
TOP3B-215ENST00000470338 TMC4Q7Z404 712 aa18.04■□□□□ 0.48
TOP3B-215ENST00000470338 NMRK2Q9NPI5 230 aa18.04■□□□□ 0.48
TOP3B-215ENST00000470338 IARSP41252 1262 aaKnown RBP18.03■□□□□ 0.48
TOP3B-215ENST00000470338 MRPL50Q8N5N7 158 aaKnown RBP18.03■□□□□ 0.48
TOP3B-215ENST00000470338 TMX4Q9H1E5 349 aaPredicted RBP18.03■□□□□ 0.48
TOP3B-215ENST00000470338 COL4A1P02462 1669 aa18.03■□□□□ 0.48
TOP3B-215ENST00000470338 F6X3S4 739 aa18.02■□□□□ 0.48
TOP3B-215ENST00000470338 BEND3Q5T5X7 828 aa18.02■□□□□ 0.48
TOP3B-215ENST00000470338 DPY19L2Q6NUT2 758 aa18.02■□□□□ 0.48
TOP3B-215ENST00000470338 CELF1Q92879 486 aaKnown RBP18.02■□□□□ 0.48
TOP3B-215ENST00000470338 WDR90Q96KV7 1748 aa18.01■□□□□ 0.47
TOP3B-215ENST00000470338 CASP7P55210 303 aa18.01■□□□□ 0.47
TOP3B-215ENST00000470338 CCDC152Q4G0S7 254 aa18.01■□□□□ 0.47
TOP3B-215ENST00000470338 SSH1Q8WYL5 1049 aa18.01■□□□□ 0.47
TOP3B-215ENST00000470338 RTFDC1Q9BY42 306 aaPredicted RBP18.01■□□□□ 0.47
TOP3B-215ENST00000470338 RRAGCQ9HB90 399 aa18.01■□□□□ 0.47
TOP3B-215ENST00000470338 CT47B1P0C2W7 299 aaPredicted RBP18■□□□□ 0.47
TOP3B-215ENST00000470338 RPS8P62241 208 aaKnown RBP18■□□□□ 0.47
TOP3B-215ENST00000470338 ALDH1L2Q3SY69 923 aa18■□□□□ 0.47
TOP3B-215ENST00000470338 UBE3BQ7Z3V4 1068 aa18■□□□□ 0.47
TOP3B-215ENST00000470338 VPS33BQ9H267 617 aa18■□□□□ 0.47
TOP3B-215ENST00000470338 SEC31BQ9NQW1 1179 aa18■□□□□ 0.47
TOP3B-215ENST00000470338 FZD9O00144 591 aa17.99■□□□□ 0.47
TOP3B-215ENST00000470338 MPNDQ8N594 471 aa17.99■□□□□ 0.47
TOP3B-215ENST00000470338 TTLL11Q8NHH1 800 aa17.99■□□□□ 0.47
TOP3B-215ENST00000470338 PLA2G12BQ9BX93 195 aa17.99■□□□□ 0.47
TOP3B-215ENST00000470338 COL4A5P29400 1685 aa17.99■□□□□ 0.47
TOP3B-215ENST00000470338 POTECB2RU33 542 aa17.98■□□□□ 0.47
TOP3B-215ENST00000470338 CTSWP56202 376 aa17.98■□□□□ 0.47
TOP3B-215ENST00000470338 DPP8Q6V1X1 898 aaPredicted RBP17.98■□□□□ 0.47
TOP3B-215ENST00000470338 SUPT20HQ8NEM7 779 aa17.98■□□□□ 0.47
TOP3B-215ENST00000470338 LTBP1Q14766 1721 aa17.98■□□□□ 0.47
TOP3B-215ENST00000470338 PTPRCP08575 1304 aa17.98■□□□□ 0.47
TOP3B-215ENST00000470338 RTL9Q8NET4 1388 aa17.97■□□□□ 0.47
TOP3B-215ENST00000470338 TOMM70O94826 608 aa17.97■□□□□ 0.47
TOP3B-215ENST00000470338 VEGFAP15692 232 aaPredicted RBP17.97■□□□□ 0.47
TOP3B-215ENST00000470338 JDP2Q8WYK2 163 aa17.97■□□□□ 0.47
TOP3B-215ENST00000470338 DUOX1Q9NRD9 1551 aa17.96■□□□□ 0.47
TOP3B-215ENST00000470338 SCN4AP35499 1836 aa17.96■□□□□ 0.47
TOP3B-215ENST00000470338 ALDH1L1O75891 902 aa17.96■□□□□ 0.47
TOP3B-215ENST00000470338 DDNO94850 711 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-215ENST00000470338 HNRNPUQ00839 825 aaKnown RBP eCLIP17.96■□□□□ 0.47
TOP3B-215ENST00000470338 LARGE2Q8N3Y3 721 aa17.96■□□□□ 0.47
TOP3B-215ENST00000470338 CCDC85AQ96PX6 553 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-215ENST00000470338 SPEF2Q9C093 1822 aa17.95■□□□□ 0.46
TOP3B-215ENST00000470338 CSF1RP07333 972 aa17.95■□□□□ 0.46
TOP3B-215ENST00000470338 SLC4A10Q6U841 1118 aa17.95■□□□□ 0.46
TOP3B-215ENST00000470338 SRCIN1Q9C0H9 1055 aa17.95■□□□□ 0.46
TOP3B-215ENST00000470338 GREM2Q9H772 168 aa17.95■□□□□ 0.46
TOP3B-215ENST00000470338 ZNF541Q9H0D2 1346 aa17.95■□□□□ 0.46
TOP3B-215ENST00000470338 PPIP5K2O43314 1243 aa17.94■□□□□ 0.46
TOP3B-215ENST00000470338 BRPF1P55201 1214 aaPredicted RBP17.94■□□□□ 0.46
TOP3B-215ENST00000470338 GPSM2P81274 684 aa17.94■□□□□ 0.46
TOP3B-215ENST00000470338 KIAA2012Q0VF49 1180 aa17.94■□□□□ 0.46
TOP3B-215ENST00000470338 AOC3Q16853 763 aa17.94■□□□□ 0.46
TOP3B-215ENST00000470338 ANKRD18AQ8IVF6 992 aa17.94■□□□□ 0.46
TOP3B-215ENST00000470338 RBM46Q8TBY0 533 aaKnown RBP17.94■□□□□ 0.46
TOP3B-215ENST00000470338 L3MBTL3Q96JM7 780 aaPredicted RBP17.94■□□□□ 0.46
TOP3B-215ENST00000470338 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
TOP3B-215ENST00000470338 NSFL1CQ9UNZ2 370 aaKnown RBP17.94■□□□□ 0.46
TOP3B-215ENST00000470338 GRM8O00222 908 aa17.93■□□□□ 0.46
TOP3B-215ENST00000470338 C16orf71Q8IYS4 520 aaPredicted RBP17.93■□□□□ 0.46
TOP3B-215ENST00000470338 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
TOP3B-215ENST00000470338 SMC4Q9NTJ3 1288 aa17.93■□□□□ 0.46
TOP3B-215ENST00000470338 PODXL2Q9NZ53 605 aa17.93■□□□□ 0.46
TOP3B-215ENST00000470338 FOXO4P98177 505 aa17.92■□□□□ 0.46
TOP3B-215ENST00000470338 NIM1KQ8IY84 436 aa17.92■□□□□ 0.46
TOP3B-215ENST00000470338 GPC2Q8N158 579 aa17.92■□□□□ 0.46
TOP3B-215ENST00000470338 POLLQ9UGP5 575 aa17.92■□□□□ 0.46
TOP3B-215ENST00000470338 RARSP54136 660 aaKnown RBP17.91■□□□□ 0.46
TOP3B-215ENST00000470338 EIF6P56537 245 aaKnown RBP17.91■□□□□ 0.46
TOP3B-215ENST00000470338 BSDC1Q9NW68 430 aaPredicted RBP17.91■□□□□ 0.46
TOP3B-215ENST00000470338 C9orf78Q9NZ63 289 aaPredicted RBP17.91■□□□□ 0.46
TOP3B-215ENST00000470338 ZNRF3Q9ULT6 936 aa17.91■□□□□ 0.46
TOP3B-215ENST00000470338 UTYO14607 1347 aa17.91■□□□□ 0.46
TOP3B-215ENST00000470338 ITGA6P23229 1130 aa17.9■□□□□ 0.46
TOP3B-215ENST00000470338 WASHC4Q2M389 1173 aa17.9■□□□□ 0.46
TOP3B-215ENST00000470338 TBC1D16Q8TBP0 767 aa17.9■□□□□ 0.46
TOP3B-215ENST00000470338 IQCA1LA6NCM1 817 aa17.89■□□□□ 0.45
TOP3B-215ENST00000470338 C6orf229H3BNL8 230 aa17.89■□□□□ 0.45
TOP3B-215ENST00000470338 FAM161AQ3B820 660 aa17.89■□□□□ 0.45
TOP3B-215ENST00000470338 EPHA10Q5JZY3 1008 aa17.89■□□□□ 0.45
TOP3B-215ENST00000470338 ANKIB1Q9P2G1 1089 aa17.89■□□□□ 0.45
TOP3B-215ENST00000470338 NOB1Q9ULX3 412 aaKnown RBP17.89■□□□□ 0.45
TOP3B-215ENST00000470338 MINPP1Q9UNW1 487 aa17.89■□□□□ 0.45
TOP3B-215ENST00000470338 NBPF7P0C2Y1 421 aaPredicted RBP17.88■□□□□ 0.45
TOP3B-215ENST00000470338 CXCL9Q07325 125 aa17.88■□□□□ 0.45
TOP3B-215ENST00000470338 FSTL1Q12841 308 aa17.88■□□□□ 0.45
TOP3B-215ENST00000470338 EYA3Q99504 573 aa17.88■□□□□ 0.45
TOP3B-215ENST00000470338 XDHP47989 1333 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms