RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 PCCAP05165 728 aaPredicted RBP13.46□□□□□ -0.25
LDHB-205ENST00000470280 SF3B3Q15393 1217 aaKnown RBP13.46□□□□□ -0.25
LDHB-205ENST00000470280 RTKN2Q8IZC4 609 aa13.46□□□□□ -0.25
LDHB-205ENST00000470280 CWC25Q9NXE8 425 aaPredicted RBP13.46□□□□□ -0.25
LDHB-205ENST00000470280 TIAM2Q8IVF5 1701 aa13.46□□□□□ -0.25
LDHB-205ENST00000470280 CCDC88AQ3V6T2 1871 aa13.46□□□□□ -0.26
LDHB-205ENST00000470280 ZC3H4Q9UPT8 1303 aaKnown RBP13.45□□□□□ -0.26
LDHB-205ENST00000470280 NEURL1BA8MQ27 555 aa13.45□□□□□ -0.26
LDHB-205ENST00000470280 E9PSI1 815 aa13.45□□□□□ -0.26
LDHB-205ENST00000470280 FKBP5Q13451 457 aaPredicted RBP13.45□□□□□ -0.26
LDHB-205ENST00000470280 GLTPD2A6NH11 291 aa13.44□□□□□ -0.26
LDHB-205ENST00000470280 F6X3S4 739 aa13.44□□□□□ -0.26
LDHB-205ENST00000470280 GRAPQ13588 217 aa13.44□□□□□ -0.26
LDHB-205ENST00000470280 DDX46Q7L014 1031 aaKnown RBP13.44□□□□□ -0.26
LDHB-205ENST00000470280 TRMT2AQ8IZ69 625 aaKnown RBP13.44□□□□□ -0.26
LDHB-205ENST00000470280 GRAPLQ8TC17 118 aaPredicted RBP13.44□□□□□ -0.26
LDHB-205ENST00000470280 DNAAF4Q8WXU2 420 aa13.44□□□□□ -0.26
LDHB-205ENST00000470280 CELF1Q92879 486 aaKnown RBP13.44□□□□□ -0.26
LDHB-205ENST00000470280 PSMD1Q99460 953 aa13.44□□□□□ -0.26
LDHB-205ENST00000470280 RRAGCQ9HB90 399 aa13.44□□□□□ -0.26
LDHB-205ENST00000470280 ATP6V0A2Q9Y487 856 aa13.44□□□□□ -0.26
LDHB-205ENST00000470280 TAF1P21675 1872 aa13.44□□□□□ -0.26
LDHB-205ENST00000470280 COL4A5P29400 1685 aa13.44□□□□□ -0.26
LDHB-205ENST00000470280 BBOX1O75936 387 aa13.43□□□□□ -0.26
LDHB-205ENST00000470280 IARSP41252 1262 aaKnown RBP13.43□□□□□ -0.26
LDHB-205ENST00000470280 NEXNQ0ZGT2 675 aa13.43□□□□□ -0.26
LDHB-205ENST00000470280 CC2D2BQ6DHV5 1058 aa13.43□□□□□ -0.26
LDHB-205ENST00000470280 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
LDHB-205ENST00000470280 SEC31BQ9NQW1 1179 aa13.43□□□□□ -0.26
LDHB-205ENST00000470280 KDM2BQ8NHM5 1336 aa13.42□□□□□ -0.26
LDHB-205ENST00000470280 CDHR2Q9BYE9 1310 aa13.42□□□□□ -0.26
LDHB-205ENST00000470280 POTECB2RU33 542 aa13.42□□□□□ -0.26
LDHB-205ENST00000470280 H7C1W4 665 aa13.42□□□□□ -0.26
LDHB-205ENST00000470280 GCKRQ14397 625 aa13.42□□□□□ -0.26
LDHB-205ENST00000470280 SP8Q8IXZ3 490 aa13.42□□□□□ -0.26
LDHB-205ENST00000470280 CCDC85AQ96PX6 553 aaPredicted RBP13.42□□□□□ -0.26
LDHB-205ENST00000470280 DICER1Q9UPY3 1922 aaKnown RBP13.42□□□□□ -0.26
LDHB-205ENST00000470280 ZNF541Q9H0D2 1346 aa13.41□□□□□ -0.26
LDHB-205ENST00000470280 PDE8AO60658 829 aa13.41□□□□□ -0.26
LDHB-205ENST00000470280 DDNO94850 711 aaPredicted RBP13.41□□□□□ -0.26
LDHB-205ENST00000470280 CASP7P55210 303 aa13.41□□□□□ -0.26
LDHB-205ENST00000470280 BEND3Q5T5X7 828 aa13.41□□□□□ -0.26
LDHB-205ENST00000470280 UBE3BQ7Z3V4 1068 aa13.41□□□□□ -0.26
LDHB-205ENST00000470280 MRPL50Q8N5N7 158 aaKnown RBP13.41□□□□□ -0.26
LDHB-205ENST00000470280 LINS1Q8NG48 757 aa13.41□□□□□ -0.26
LDHB-205ENST00000470280 SSH1Q8WYL5 1049 aa13.4□□□□□ -0.26
LDHB-205ENST00000470280 RTFDC1Q9BY42 306 aaPredicted RBP13.4□□□□□ -0.26
LDHB-205ENST00000470280 FZD9O00144 591 aa13.39□□□□□ -0.27
LDHB-205ENST00000470280 TOMM70O94826 608 aa13.39□□□□□ -0.27
LDHB-205ENST00000470280 CTSWP56202 376 aa13.39□□□□□ -0.27
LDHB-205ENST00000470280 RPS8P62241 208 aaKnown RBP13.39□□□□□ -0.27
LDHB-205ENST00000470280 AOC3Q16853 763 aa13.39□□□□□ -0.27
LDHB-205ENST00000470280 GRIPAP1Q4V328 841 aa13.39□□□□□ -0.27
LDHB-205ENST00000470280 DPY19L2Q6NUT2 758 aa13.39□□□□□ -0.27
LDHB-205ENST00000470280 MPNDQ8N594 471 aa13.39□□□□□ -0.27
LDHB-205ENST00000470280 TTLL11Q8NHH1 800 aa13.39□□□□□ -0.27
LDHB-205ENST00000470280 BCL2L13Q9BXK5 485 aa13.39□□□□□ -0.27
LDHB-205ENST00000470280 DUOX1Q9NRD9 1551 aa13.39□□□□□ -0.27
LDHB-205ENST00000470280 LRRC37AA6NMS7 1700 aa13.39□□□□□ -0.27
LDHB-205ENST00000470280 CCDC152Q4G0S7 254 aa13.38□□□□□ -0.27
LDHB-205ENST00000470280 DPP8Q6V1X1 898 aaPredicted RBP13.38□□□□□ -0.27
LDHB-205ENST00000470280 LARGE2Q8N3Y3 721 aa13.38□□□□□ -0.27
LDHB-205ENST00000470280 WDR90Q96KV7 1748 aa13.38□□□□□ -0.27
LDHB-205ENST00000470280 CACNA1FO60840 1977 aa13.38□□□□□ -0.27
LDHB-205ENST00000470280 PPIP5K2O43314 1243 aa13.37□□□□□ -0.27
LDHB-205ENST00000470280 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
LDHB-205ENST00000470280 VEGFAP15692 232 aaPredicted RBP13.37□□□□□ -0.27
LDHB-205ENST00000470280 GPSM2P81274 684 aa13.37□□□□□ -0.27
LDHB-205ENST00000470280 TMC4Q7Z404 712 aa13.37□□□□□ -0.27
LDHB-205ENST00000470280 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
LDHB-205ENST00000470280 GREM2Q9H772 168 aa13.37□□□□□ -0.27
LDHB-205ENST00000470280 SLC4A10Q6U841 1118 aa13.36□□□□□ -0.27
LDHB-205ENST00000470280 JDP2Q8WYK2 163 aa13.36□□□□□ -0.27
LDHB-205ENST00000470280 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
LDHB-205ENST00000470280 PLA2G12BQ9BX93 195 aa13.36□□□□□ -0.27
LDHB-205ENST00000470280 TMX4Q9H1E5 349 aaPredicted RBP13.36□□□□□ -0.27
LDHB-205ENST00000470280 POLLQ9UGP5 575 aa13.36□□□□□ -0.27
LDHB-205ENST00000470280 NSFL1CQ9UNZ2 370 aaKnown RBP13.36□□□□□ -0.27
LDHB-205ENST00000470280 POTEIP0CG38 1075 aa13.35□□□□□ -0.27
LDHB-205ENST00000470280 POTEJP0CG39 1038 aa13.35□□□□□ -0.27
LDHB-205ENST00000470280 FOXO4P98177 505 aa13.35□□□□□ -0.27
LDHB-205ENST00000470280 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.27
LDHB-205ENST00000470280 KIAA2012Q0VF49 1180 aa13.35□□□□□ -0.27
LDHB-205ENST00000470280 EPHA10Q5JZY3 1008 aa13.35□□□□□ -0.27
LDHB-205ENST00000470280 SUPT20HQ8NEM7 779 aa13.35□□□□□ -0.27
LDHB-205ENST00000470280 RBM46Q8TBY0 533 aaKnown RBP13.35□□□□□ -0.27
LDHB-205ENST00000470280 L3MBTL3Q96JM7 780 aaPredicted RBP13.35□□□□□ -0.27
LDHB-205ENST00000470280 LTBP1Q14766 1721 aa13.35□□□□□ -0.27
LDHB-205ENST00000470280 RTL9Q8NET4 1388 aa13.34□□□□□ -0.27
LDHB-205ENST00000470280 WTIPA6NIX2 430 aaPredicted RBP13.34□□□□□ -0.27
LDHB-205ENST00000470280 ALDH1L1O75891 902 aa13.34□□□□□ -0.27
LDHB-205ENST00000470280 CSF1RP07333 972 aa13.34□□□□□ -0.27
LDHB-205ENST00000470280 FAM161AQ3B820 660 aa13.34□□□□□ -0.27
LDHB-205ENST00000470280 ALDH1L2Q3SY69 923 aa13.34□□□□□ -0.27
LDHB-205ENST00000470280 ANKRD18AQ8IVF6 992 aa13.34□□□□□ -0.27
LDHB-205ENST00000470280 NIM1KQ8IY84 436 aa13.34□□□□□ -0.27
LDHB-205ENST00000470280 C16orf71Q8IYS4 520 aaPredicted RBP13.34□□□□□ -0.27
LDHB-205ENST00000470280 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
LDHB-205ENST00000470280 VPS33BQ9H267 617 aa13.34□□□□□ -0.27
LDHB-205ENST00000470280 SMC4Q9NTJ3 1288 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms