RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 C16orf71Q8IYS4 520 aaPredicted RBP18.08■□□□□ 0.48
COMMD3-208ENST00000470045 ZBTB38Q8NAP3 1195 aaPredicted RBP18.08■□□□□ 0.48
COMMD3-208ENST00000470045 GRAPLQ8TC17 118 aaPredicted RBP18.08■□□□□ 0.48
COMMD3-208ENST00000470045 ZNF428Q96B54 188 aa18.08■□□□□ 0.48
COMMD3-208ENST00000470045 LTBP1Q14766 1721 aa18.08■□□□□ 0.48
COMMD3-208ENST00000470045 PI4KAP2A4QPH2 592 aa18.07■□□□□ 0.48
COMMD3-208ENST00000470045 TCERG1O14776 1098 aaKnown RBP18.07■□□□□ 0.48
COMMD3-208ENST00000470045 VAMP4O75379 141 aa18.07■□□□□ 0.48
COMMD3-208ENST00000470045 PCCAP05165 728 aaPredicted RBP18.07■□□□□ 0.48
COMMD3-208ENST00000470045 EXOSC9Q06265 439 aaKnown RBP18.07■□□□□ 0.48
COMMD3-208ENST00000470045 DDX46Q7L014 1031 aaKnown RBP18.07■□□□□ 0.48
COMMD3-208ENST00000470045 G2E3Q7L622 706 aa18.07■□□□□ 0.48
COMMD3-208ENST00000470045 PI4KAP1Q8N8J0 262 aa18.07■□□□□ 0.48
COMMD3-208ENST00000470045 MAP3K2Q9Y2U5 619 aa18.07■□□□□ 0.48
COMMD3-208ENST00000470045 ZNF541Q9H0D2 1346 aa18.06■□□□□ 0.48
COMMD3-208ENST00000470045 FZD9O00144 591 aa18.06■□□□□ 0.48
COMMD3-208ENST00000470045 IRS4O14654 1257 aaPredicted RBP18.06■□□□□ 0.48
COMMD3-208ENST00000470045 DDNO94850 711 aaPredicted RBP18.06■□□□□ 0.48
COMMD3-208ENST00000470045 SLC4A2P04920 1241 aa18.06■□□□□ 0.48
COMMD3-208ENST00000470045 FSTL1Q12841 308 aa18.06■□□□□ 0.48
COMMD3-208ENST00000470045 SP8Q8IXZ3 490 aa18.06■□□□□ 0.48
COMMD3-208ENST00000470045 L3MBTL3Q96JM7 780 aaPredicted RBP18.06■□□□□ 0.48
COMMD3-208ENST00000470045 RTFDC1Q9BY42 306 aaPredicted RBP18.06■□□□□ 0.48
COMMD3-208ENST00000470045 MYH16Q9H6N6 1097 aa18.06■□□□□ 0.48
COMMD3-208ENST00000470045 CWC25Q9NXE8 425 aaPredicted RBP18.06■□□□□ 0.48
COMMD3-208ENST00000470045 IGKV5-2P06315 115 aa18.05■□□□□ 0.48
COMMD3-208ENST00000470045 RTL5Q5HYW3 569 aaPredicted RBP18.05■□□□□ 0.48
COMMD3-208ENST00000470045 TMC4Q7Z404 712 aa18.05■□□□□ 0.48
COMMD3-208ENST00000470045 CEP350Q5VT06 3117 aa18.05■□□□□ 0.48
COMMD3-208ENST00000470045 CDHR2Q9BYE9 1310 aa18.04■□□□□ 0.48
COMMD3-208ENST00000470045 FLIIQ13045 1269 aa18.04■□□□□ 0.48
COMMD3-208ENST00000470045 VPS33BQ9H267 617 aa18.04■□□□□ 0.48
COMMD3-208ENST00000470045 ADAMTSL1Q8N6G6 1762 aa18.04■□□□□ 0.48
COMMD3-208ENST00000470045 CCER2I3L3R5 266 aa18.03■□□□□ 0.48
COMMD3-208ENST00000470045 HSP90B1P14625 803 aaKnown RBP18.03■□□□□ 0.48
COMMD3-208ENST00000470045 TMX4Q9H1E5 349 aaPredicted RBP18.03■□□□□ 0.48
COMMD3-208ENST00000470045 SMC1BQ8NDV3 1235 aa18.02■□□□□ 0.48
COMMD3-208ENST00000470045 JDP2Q8WYK2 163 aa18.02■□□□□ 0.48
COMMD3-208ENST00000470045 CELF1Q92879 486 aaKnown RBP18.02■□□□□ 0.48
COMMD3-208ENST00000470045 NEURL1BA8MQ27 555 aa18.01■□□□□ 0.47
COMMD3-208ENST00000470045 PDE8AO60658 829 aa18.01■□□□□ 0.47
COMMD3-208ENST00000470045 NEXNQ0ZGT2 675 aa18.01■□□□□ 0.47
COMMD3-208ENST00000470045 LARGE2Q8N3Y3 721 aa18.01■□□□□ 0.47
COMMD3-208ENST00000470045 MPNDQ8N594 471 aa18.01■□□□□ 0.47
COMMD3-208ENST00000470045 SUPT20HQ8NEM7 779 aa18.01■□□□□ 0.47
COMMD3-208ENST00000470045 IQCA1LA6NCM1 817 aa18■□□□□ 0.47
COMMD3-208ENST00000470045 APLP1P51693 650 aa18■□□□□ 0.47
COMMD3-208ENST00000470045 CWF19L2Q2TBE0 894 aaKnown RBP18■□□□□ 0.47
COMMD3-208ENST00000470045 DPP8Q6V1X1 898 aaPredicted RBP18■□□□□ 0.47
COMMD3-208ENST00000470045 GPC2Q8N158 579 aa18■□□□□ 0.47
COMMD3-208ENST00000470045 PPIP5K2O43314 1243 aa17.99■□□□□ 0.47
COMMD3-208ENST00000470045 FKBP5Q13451 457 aaPredicted RBP17.99■□□□□ 0.47
COMMD3-208ENST00000470045 AOC3Q16853 763 aa17.99■□□□□ 0.47
COMMD3-208ENST00000470045 DNAAF4Q8WXU2 420 aa17.99■□□□□ 0.47
COMMD3-208ENST00000470045 SPEF2Q9C093 1822 aa17.99■□□□□ 0.47
COMMD3-208ENST00000470045 KIAA2012Q0VF49 1180 aa17.98■□□□□ 0.47
COMMD3-208ENST00000470045 CCDC152Q4G0S7 254 aa17.98■□□□□ 0.47
COMMD3-208ENST00000470045 NIM1KQ8IY84 436 aa17.98■□□□□ 0.47
COMMD3-208ENST00000470045 JARID2Q92833 1246 aaPredicted RBP17.98■□□□□ 0.47
COMMD3-208ENST00000470045 TAF1DQ9H5J8 278 aaPredicted RBP17.98■□□□□ 0.47
COMMD3-208ENST00000470045 RTL9Q8NET4 1388 aa17.97■□□□□ 0.47
COMMD3-208ENST00000470045 H7C1W4 665 aa17.97■□□□□ 0.47
COMMD3-208ENST00000470045 EIF6P56537 245 aaKnown RBP17.97■□□□□ 0.47
COMMD3-208ENST00000470045 RPS8P62241 208 aaKnown RBP17.97■□□□□ 0.47
COMMD3-208ENST00000470045 LINS1Q8NG48 757 aa17.97■□□□□ 0.47
COMMD3-208ENST00000470045 SEC31BQ9NQW1 1179 aa17.97■□□□□ 0.47
COMMD3-208ENST00000470045 E9PSI1 815 aa17.96■□□□□ 0.47
COMMD3-208ENST00000470045 CASP7P55210 303 aa17.96■□□□□ 0.47
COMMD3-208ENST00000470045 CTSWP56202 376 aa17.96■□□□□ 0.47
COMMD3-208ENST00000470045 GCKRQ14397 625 aa17.96■□□□□ 0.47
COMMD3-208ENST00000470045 HACL1Q9UJ83 578 aa17.96■□□□□ 0.47
COMMD3-208ENST00000470045 POTEIP0CG38 1075 aa17.95■□□□□ 0.46
COMMD3-208ENST00000470045 POTEJP0CG39 1038 aa17.95■□□□□ 0.46
COMMD3-208ENST00000470045 PLA2G12BQ9BX93 195 aa17.95■□□□□ 0.46
COMMD3-208ENST00000470045 ZNRF3Q9ULT6 936 aa17.95■□□□□ 0.46
COMMD3-208ENST00000470045 GPSM2P81274 684 aa17.94■□□□□ 0.46
COMMD3-208ENST00000470045 SLFN5Q08AF3 891 aa17.94■□□□□ 0.46
COMMD3-208ENST00000470045 CHADLQ6NUI6 762 aa17.94■□□□□ 0.46
COMMD3-208ENST00000470045 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
COMMD3-208ENST00000470045 TTLL11Q8NHH1 800 aa17.94■□□□□ 0.46
COMMD3-208ENST00000470045 PODXL2Q9NZ53 605 aa17.94■□□□□ 0.46
COMMD3-208ENST00000470045 NSFL1CQ9UNZ2 370 aaKnown RBP17.94■□□□□ 0.46
COMMD3-208ENST00000470045 PSME4Q14997 1843 aa17.93■□□□□ 0.46
COMMD3-208ENST00000470045 EPHX2P34913 555 aa17.93■□□□□ 0.46
COMMD3-208ENST00000470045 SCNN1DP51172 638 aa17.93■□□□□ 0.46
COMMD3-208ENST00000470045 BEND3Q5T5X7 828 aa17.93■□□□□ 0.46
COMMD3-208ENST00000470045 LDHDQ86WU2 507 aa17.93■□□□□ 0.46
COMMD3-208ENST00000470045 POLLQ9UGP5 575 aa17.93■□□□□ 0.46
COMMD3-208ENST00000470045 F6X3S4 739 aa17.92■□□□□ 0.46
COMMD3-208ENST00000470045 CXCL9Q07325 125 aa17.92■□□□□ 0.46
COMMD3-208ENST00000470045 DNAJC5GQ8N7S2 189 aa17.92■□□□□ 0.46
COMMD3-208ENST00000470045 CCDC85AQ96PX6 553 aaPredicted RBP17.92■□□□□ 0.46
COMMD3-208ENST00000470045 GJA3Q9Y6H8 435 aa17.92■□□□□ 0.46
COMMD3-208ENST00000470045 A0A1B0GUL6 1792 aa17.91■□□□□ 0.46
COMMD3-208ENST00000470045 YDJCA8MPS7 323 aa17.91■□□□□ 0.46
COMMD3-208ENST00000470045 WASHC4Q2M389 1173 aa17.91■□□□□ 0.46
COMMD3-208ENST00000470045 PNMA8AQ86V59 439 aaPredicted RBP17.91■□□□□ 0.46
COMMD3-208ENST00000470045 ANKRD18AQ8IVF6 992 aa17.91■□□□□ 0.46
COMMD3-208ENST00000470045 TRMT2AQ8IZ69 625 aaKnown RBP17.91■□□□□ 0.46
COMMD3-208ENST00000470045 TBC1D16Q8TBP0 767 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms