RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 TRIM28Q13263 835 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-205ENST00000468996 LMOD1P29536 600 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-205ENST00000468996 CCDC27Q2M243 656 aa13.7□□□□□ -0.22
TGFBR3-205ENST00000468996 PNMA8AQ86V59 439 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-205ENST00000468996 STK31Q9BXU1 1019 aa13.7□□□□□ -0.22
TGFBR3-205ENST00000468996 SF3B3Q15393 1217 aaKnown RBP13.69□□□□□ -0.22
TGFBR3-205ENST00000468996 ZBTB38Q8NAP3 1195 aaPredicted RBP13.69□□□□□ -0.22
TGFBR3-205ENST00000468996 CELF1Q92879 486 aaKnown RBP13.69□□□□□ -0.22
TGFBR3-205ENST00000468996 VPS33BQ9H267 617 aa13.69□□□□□ -0.22
TGFBR3-205ENST00000468996 ZNRF3Q9ULT6 936 aa13.69□□□□□ -0.22
TGFBR3-205ENST00000468996 NSFL1CQ9UNZ2 370 aaKnown RBP13.69□□□□□ -0.22
TGFBR3-205ENST00000468996 MAP3K2Q9Y2U5 619 aa13.69□□□□□ -0.22
TGFBR3-205ENST00000468996 SNED1Q8TER0 1413 aa13.69□□□□□ -0.22
TGFBR3-205ENST00000468996 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 EPS15P42566 896 aa13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 CXCL9Q07325 125 aa13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 TWISTNBQ3B726 338 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 MAP1SQ66K74 1059 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 TMC4Q7Z404 712 aa13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 FAM9BQ8IZU0 186 aa13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 CCDC191Q8NCU4 936 aa13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 CCDC85AQ96PX6 553 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 METTL22Q9BUU2 404 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 RTFDC1Q9BY42 306 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 CWC25Q9NXE8 425 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-205ENST00000468996 PI4KAP2A4QPH2 592 aa13.67□□□□□ -0.22
TGFBR3-205ENST00000468996 C6orf229H3BNL8 230 aa13.67□□□□□ -0.22
TGFBR3-205ENST00000468996 RIMBP2O15034 1052 aa13.67□□□□□ -0.22
TGFBR3-205ENST00000468996 RAD17O75943 681 aa13.67□□□□□ -0.22
TGFBR3-205ENST00000468996 ITGBL1O95965 494 aaPredicted RBP13.67□□□□□ -0.22
TGFBR3-205ENST00000468996 HSP90B1P14625 803 aaKnown RBP13.67□□□□□ -0.22
TGFBR3-205ENST00000468996 RPS8P62241 208 aaKnown RBP13.67□□□□□ -0.22
TGFBR3-205ENST00000468996 KSR2Q6VAB6 950 aa13.67□□□□□ -0.22
TGFBR3-205ENST00000468996 PI4KAP1Q8N8J0 262 aa13.67□□□□□ -0.22
TGFBR3-205ENST00000468996 JMYQ8N9B5 988 aa13.67□□□□□ -0.22
TGFBR3-205ENST00000468996 CREBZFQ9NS37 354 aa13.67□□□□□ -0.22
TGFBR3-205ENST00000468996 MKRN1Q9UHC7 482 aaKnown RBP13.67□□□□□ -0.22
TGFBR3-205ENST00000468996 COL4A5P29400 1685 aa13.66□□□□□ -0.22
TGFBR3-205ENST00000468996 SCNN1DP51172 638 aa13.66□□□□□ -0.22
TGFBR3-205ENST00000468996 KIAA2012Q0VF49 1180 aa13.66□□□□□ -0.22
TGFBR3-205ENST00000468996 WASHC4Q2M389 1173 aa13.66□□□□□ -0.22
TGFBR3-205ENST00000468996 G2E3Q7L622 706 aa13.66□□□□□ -0.22
TGFBR3-205ENST00000468996 BCL2L13Q9BXK5 485 aa13.66□□□□□ -0.22
TGFBR3-205ENST00000468996 SEC31BQ9NQW1 1179 aa13.66□□□□□ -0.22
TGFBR3-205ENST00000468996 PCCAP05165 728 aaPredicted RBP13.65□□□□□ -0.22
TGFBR3-205ENST00000468996 GPSM2P81274 684 aa13.65□□□□□ -0.22
TGFBR3-205ENST00000468996 NEXNQ0ZGT2 675 aa13.65□□□□□ -0.22
TGFBR3-205ENST00000468996 TNIP1Q15025 636 aa13.65□□□□□ -0.22
TGFBR3-205ENST00000468996 CIAPIN1Q6FI81 312 aa13.65□□□□□ -0.22
TGFBR3-205ENST00000468996 ANKRD36CQ5JPF3 1778 aa13.65□□□□□ -0.22
TGFBR3-205ENST00000468996 IL16Q14005 1332 aa13.64□□□□□ -0.23
TGFBR3-205ENST00000468996 TMEM88BA6NKF7 163 aa13.64□□□□□ -0.23
TGFBR3-205ENST00000468996 PDE8AO60658 829 aa13.64□□□□□ -0.23
TGFBR3-205ENST00000468996 GMPSP49915 693 aaPredicted RBP13.64□□□□□ -0.23
TGFBR3-205ENST00000468996 CCDC152Q4G0S7 254 aa13.64□□□□□ -0.23
TGFBR3-205ENST00000468996 WDR63Q8IWG1 891 aa13.64□□□□□ -0.23
TGFBR3-205ENST00000468996 GPRC5DQ9NZD1 345 aa13.64□□□□□ -0.23
TGFBR3-205ENST00000468996 ANKIB1Q9P2G1 1089 aa13.64□□□□□ -0.23
TGFBR3-205ENST00000468996 POLLQ9UGP5 575 aa13.64□□□□□ -0.23
TGFBR3-205ENST00000468996 PASKQ96RG2 1323 aa13.64□□□□□ -0.23
TGFBR3-205ENST00000468996 SCN4AP35499 1836 aa13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 G3V3G9 751 aa13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 IGKV5-2P06315 115 aa13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 EXOSC9Q06265 439 aaKnown RBP13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 DOK7Q18PE1 504 aa13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 CWF19L2Q2TBE0 894 aaKnown RBP13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 IFFO2Q5TF58 517 aa13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 USP50Q70EL3 339 aaPredicted RBP13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 GPR101Q96P66 508 aaPredicted RBP13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 DBNDD1Q9H9R9 158 aa13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 FANCIQ9NVI1 1328 aa13.63□□□□□ -0.23
TGFBR3-205ENST00000468996 YDJCA8MPS7 323 aa13.62□□□□□ -0.23
TGFBR3-205ENST00000468996 TBC1D16Q8TBP0 767 aa13.62□□□□□ -0.23
TGFBR3-205ENST00000468996 EYA3Q99504 573 aa13.62□□□□□ -0.23
TGFBR3-205ENST00000468996 ZC3H12CQ9C0D7 883 aaKnown RBP13.62□□□□□ -0.23
TGFBR3-205ENST00000468996 ADARB2Q9NS39 739 aaKnown RBP13.62□□□□□ -0.23
TGFBR3-205ENST00000468996 TAF1P21675 1872 aa13.61□□□□□ -0.23
TGFBR3-205ENST00000468996 VAMP4O75379 141 aa13.61□□□□□ -0.23
TGFBR3-205ENST00000468996 FMR1Q06787 632 aaKnown RBP eCLIP13.61□□□□□ -0.23
TGFBR3-205ENST00000468996 FKBP5Q13451 457 aaPredicted RBP13.61□□□□□ -0.23
TGFBR3-205ENST00000468996 ANKRD18AQ8IVF6 992 aa13.61□□□□□ -0.23
TGFBR3-205ENST00000468996 KCNQ5Q9NR82 932 aa13.61□□□□□ -0.23
TGFBR3-205ENST00000468996 CNOT7Q9UIV1 285 aaKnown RBP13.61□□□□□ -0.23
TGFBR3-205ENST00000468996 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
TGFBR3-205ENST00000468996 LAMB2P55268 1798 aa13.6□□□□□ -0.23
TGFBR3-205ENST00000468996 NEURL1BA8MQ27 555 aa13.6□□□□□ -0.23
TGFBR3-205ENST00000468996 H7C1D1 291 aa13.6□□□□□ -0.23
TGFBR3-205ENST00000468996 TRAF5O00463 557 aa13.6□□□□□ -0.23
TGFBR3-205ENST00000468996 UFL1O94874 794 aa13.6□□□□□ -0.23
TGFBR3-205ENST00000468996 HSPA1AP0DMV8 641 aaKnown RBP13.6□□□□□ -0.23
TGFBR3-205ENST00000468996 HSPA1BP0DMV9 641 aaKnown RBP13.6□□□□□ -0.23
TGFBR3-205ENST00000468996 FLIIQ13045 1269 aa13.6□□□□□ -0.23
TGFBR3-205ENST00000468996 UBE3BQ7Z3V4 1068 aa13.6□□□□□ -0.23
TGFBR3-205ENST00000468996 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
TGFBR3-205ENST00000468996 GGA1Q9UJY5 639 aa13.6□□□□□ -0.23
TGFBR3-205ENST00000468996 ABT1Q9ULW3 272 aaKnown RBP13.6□□□□□ -0.23
TGFBR3-205ENST00000468996 PCNTO95613 3336 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms