RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 KSR2Q6VAB6 950 aa16.12■□□□□ 0.17
ABCF1-204ENST00000468958 CELF1Q92879 486 aaKnown RBP16.12■□□□□ 0.17
ABCF1-204ENST00000468958 MYH16Q9H6N6 1097 aa16.12■□□□□ 0.17
ABCF1-204ENST00000468958 ATP6V0A2Q9Y487 856 aa16.12■□□□□ 0.17
ABCF1-204ENST00000468958 IRS4O14654 1257 aaPredicted RBP16.11■□□□□ 0.17
ABCF1-204ENST00000468958 HSPA6P17066 643 aa16.11■□□□□ 0.17
ABCF1-204ENST00000468958 SF3B3Q15393 1217 aaKnown RBP16.11■□□□□ 0.17
ABCF1-204ENST00000468958 ZBTB38Q8NAP3 1195 aaPredicted RBP16.11■□□□□ 0.17
ABCF1-204ENST00000468958 GRAPQ13588 217 aa16.1■□□□□ 0.17
ABCF1-204ENST00000468958 CWF19L2Q2TBE0 894 aaKnown RBP16.1■□□□□ 0.17
ABCF1-204ENST00000468958 CC2D2BQ6DHV5 1058 aa16.1■□□□□ 0.17
ABCF1-204ENST00000468958 CCDC191Q8NCU4 936 aa16.1■□□□□ 0.17
ABCF1-204ENST00000468958 RBM46Q8TBY0 533 aaKnown RBP16.1■□□□□ 0.17
ABCF1-204ENST00000468958 GRAPLQ8TC17 118 aaPredicted RBP16.1■□□□□ 0.17
ABCF1-204ENST00000468958 STK31Q9BXU1 1019 aa16.1■□□□□ 0.17
ABCF1-204ENST00000468958 A0A1B0GUL6 1792 aa16.1■□□□□ 0.17
ABCF1-204ENST00000468958 FZD9O00144 591 aa16.09■□□□□ 0.17
ABCF1-204ENST00000468958 DDX58O95786 925 aaKnown RBP16.09■□□□□ 0.17
ABCF1-204ENST00000468958 PCCAP05165 728 aaPredicted RBP16.09■□□□□ 0.17
ABCF1-204ENST00000468958 POTEIP0CG38 1075 aa16.09■□□□□ 0.17
ABCF1-204ENST00000468958 POTEJP0CG39 1038 aa16.09■□□□□ 0.17
ABCF1-204ENST00000468958 VEGFAP15692 232 aaPredicted RBP16.09■□□□□ 0.17
ABCF1-204ENST00000468958 FLIIQ13045 1269 aa16.09■□□□□ 0.17
ABCF1-204ENST00000468958 DDX46Q7L014 1031 aaKnown RBP16.09■□□□□ 0.17
ABCF1-204ENST00000468958 SP8Q8IXZ3 490 aa16.09■□□□□ 0.17
ABCF1-204ENST00000468958 CWC25Q9NXE8 425 aaPredicted RBP16.09■□□□□ 0.17
ABCF1-204ENST00000468958 BBOX1O75936 387 aa16.08■□□□□ 0.16
ABCF1-204ENST00000468958 DPY19L2Q6NUT2 758 aa16.08■□□□□ 0.16
ABCF1-204ENST00000468958 SEC31BQ9NQW1 1179 aa16.08■□□□□ 0.16
ABCF1-204ENST00000468958 NEURL1BA8MQ27 555 aa16.07■□□□□ 0.16
ABCF1-204ENST00000468958 E9PSI1 815 aa16.07■□□□□ 0.16
ABCF1-204ENST00000468958 AOC3Q16853 763 aa16.07■□□□□ 0.16
ABCF1-204ENST00000468958 RTFDC1Q9BY42 306 aaPredicted RBP16.07■□□□□ 0.16
ABCF1-204ENST00000468958 ZNF646O15015 1829 aaPredicted RBP16.07■□□□□ 0.16
ABCF1-204ENST00000468958 SCN9AQ15858 1988 aa16.07■□□□□ 0.16
ABCF1-204ENST00000468958 CEP350Q5VT06 3117 aa16.07■□□□□ 0.16
ABCF1-204ENST00000468958 CDHR2Q9BYE9 1310 aa16.06■□□□□ 0.16
ABCF1-204ENST00000468958 HTRA3P83110 453 aa16.06■□□□□ 0.16
ABCF1-204ENST00000468958 C16orf71Q8IYS4 520 aaPredicted RBP16.06■□□□□ 0.16
ABCF1-204ENST00000468958 CCDC85AQ96PX6 553 aaPredicted RBP16.06■□□□□ 0.16
ABCF1-204ENST00000468958 PSME4Q14997 1843 aa16.05■□□□□ 0.16
ABCF1-204ENST00000468958 F6X3S4 739 aa16.05■□□□□ 0.16
ABCF1-204ENST00000468958 PDE8AO60658 829 aa16.05■□□□□ 0.16
ABCF1-204ENST00000468958 HNRNPUQ00839 825 aaKnown RBP eCLIP16.05■□□□□ 0.16
ABCF1-204ENST00000468958 FKBP5Q13451 457 aaPredicted RBP16.05■□□□□ 0.16
ABCF1-204ENST00000468958 CDCA7LQ96GN5 454 aa16.05■□□□□ 0.16
ABCF1-204ENST00000468958 L3MBTL3Q96JM7 780 aaPredicted RBP16.05■□□□□ 0.16
ABCF1-204ENST00000468958 PPIP5K2O43314 1243 aa16.04■□□□□ 0.16
ABCF1-204ENST00000468958 CASP7P55210 303 aa16.04■□□□□ 0.16
ABCF1-204ENST00000468958 GRIPAP1Q4V328 841 aa16.04■□□□□ 0.16
ABCF1-204ENST00000468958 DPP8Q6V1X1 898 aaPredicted RBP16.04■□□□□ 0.16
ABCF1-204ENST00000468958 LARGE2Q8N3Y3 721 aa16.04■□□□□ 0.16
ABCF1-204ENST00000468958 MPNDQ8N594 471 aa16.04■□□□□ 0.16
ABCF1-204ENST00000468958 H7C1W4 665 aa16.03■□□□□ 0.16
ABCF1-204ENST00000468958 GPSM2P81274 684 aa16.03■□□□□ 0.16
ABCF1-204ENST00000468958 FSTL1Q12841 308 aa16.03■□□□□ 0.16
ABCF1-204ENST00000468958 DNAAF4Q8WXU2 420 aa16.03■□□□□ 0.16
ABCF1-204ENST00000468958 GPR101Q96P66 508 aaPredicted RBP16.03■□□□□ 0.16
ABCF1-204ENST00000468958 TAF1DQ9H5J8 278 aaPredicted RBP16.03■□□□□ 0.16
ABCF1-204ENST00000468958 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
ABCF1-204ENST00000468958 RPS8P62241 208 aaKnown RBP16.02■□□□□ 0.16
ABCF1-204ENST00000468958 SLFN5Q08AF3 891 aa16.02■□□□□ 0.16
ABCF1-204ENST00000468958 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.16
ABCF1-204ENST00000468958 GCKRQ14397 625 aa16.02■□□□□ 0.16
ABCF1-204ENST00000468958 UBE3BQ7Z3V4 1068 aa16.02■□□□□ 0.16
ABCF1-204ENST00000468958 SMC1BQ8NDV3 1235 aa16.02■□□□□ 0.16
ABCF1-204ENST00000468958 JDP2Q8WYK2 163 aa16.02■□□□□ 0.16
ABCF1-204ENST00000468958 POLLQ9UGP5 575 aa16.02■□□□□ 0.16
ABCF1-204ENST00000468958 ZBED9Q6R2W3 1325 aa16.01■□□□□ 0.15
ABCF1-204ENST00000468958 YDJCA8MPS7 323 aa16.01■□□□□ 0.15
ABCF1-204ENST00000468958 SCNN1DP51172 638 aa16.01■□□□□ 0.15
ABCF1-204ENST00000468958 CTSWP56202 376 aa16.01■□□□□ 0.15
ABCF1-204ENST00000468958 KIAA2012Q0VF49 1180 aa16.01■□□□□ 0.15
ABCF1-204ENST00000468958 GPC2Q8N158 579 aa16.01■□□□□ 0.15
ABCF1-204ENST00000468958 TTLL11Q8NHH1 800 aa16.01■□□□□ 0.15
ABCF1-204ENST00000468958 GREM2Q9H772 168 aa16.01■□□□□ 0.15
ABCF1-204ENST00000468958 GJA3Q9Y6H8 435 aa16.01■□□□□ 0.15
ABCF1-204ENST00000468958 WTIPA6NIX2 430 aaPredicted RBP16■□□□□ 0.15
ABCF1-204ENST00000468958 CCDC152Q4G0S7 254 aa16■□□□□ 0.15
ABCF1-204ENST00000468958 BEND3Q5T5X7 828 aa16■□□□□ 0.15
ABCF1-204ENST00000468958 TMC4Q7Z404 712 aa16■□□□□ 0.15
ABCF1-204ENST00000468958 NIM1KQ8IY84 436 aa16■□□□□ 0.15
ABCF1-204ENST00000468958 DNAJC5GQ8N7S2 189 aa16■□□□□ 0.15
ABCF1-204ENST00000468958 LINS1Q8NG48 757 aa16■□□□□ 0.15
ABCF1-204ENST00000468958 NSFL1CQ9UNZ2 370 aaKnown RBP16■□□□□ 0.15
ABCF1-204ENST00000468958 APLP1P51693 650 aa15.99■□□□□ 0.15
ABCF1-204ENST00000468958 EIF6P56537 245 aaKnown RBP15.99■□□□□ 0.15
ABCF1-204ENST00000468958 CXCL9Q07325 125 aa15.99■□□□□ 0.15
ABCF1-204ENST00000468958 TRMT2AQ8IZ69 625 aaKnown RBP15.99■□□□□ 0.15
ABCF1-204ENST00000468958 MRPL50Q8N5N7 158 aaKnown RBP15.99■□□□□ 0.15
ABCF1-204ENST00000468958 SUPT20HQ8NEM7 779 aa15.99■□□□□ 0.15
ABCF1-204ENST00000468958 VPS33BQ9H267 617 aa15.99■□□□□ 0.15
ABCF1-204ENST00000468958 RTL9Q8NET4 1388 aa15.99■□□□□ 0.15
ABCF1-204ENST00000468958 RIMBP2O15034 1052 aa15.98■□□□□ 0.15
ABCF1-204ENST00000468958 EPHX2P34913 555 aa15.98■□□□□ 0.15
ABCF1-204ENST00000468958 TBC1D16Q8TBP0 767 aa15.98■□□□□ 0.15
ABCF1-204ENST00000468958 PLA2G12BQ9BX93 195 aa15.98■□□□□ 0.15
ABCF1-204ENST00000468958 TMX4Q9H1E5 349 aaPredicted RBP15.98■□□□□ 0.15
ABCF1-204ENST00000468958 HACL1Q9UJ83 578 aa15.98■□□□□ 0.15
ABCF1-204ENST00000468958 ZNRF3Q9ULT6 936 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms