RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 TSHZ3Q63HK5 1081 aa10.21□□□□□ -0.77
BRCA1-208ENST00000468300 HSP90AB3PQ58FF7 597 aa10.21□□□□□ -0.78
BRCA1-208ENST00000468300 ATG9AQ7Z3C6 839 aa10.21□□□□□ -0.78
BRCA1-208ENST00000468300 USP42Q9H9J4 1324 aaKnown RBP10.2□□□□□ -0.78
BRCA1-208ENST00000468300 NTSR2O95665 410 aa10.2□□□□□ -0.78
BRCA1-208ENST00000468300 KIF1BPQ96EK5 621 aa10.2□□□□□ -0.78
BRCA1-208ENST00000468300 PI4K2BQ8TCG2 481 aa10.2□□□□□ -0.78
BRCA1-208ENST00000468300 A0A1B0GUL6 1792 aa10.2□□□□□ -0.78
BRCA1-208ENST00000468300 RGL2O15211 777 aa10.2□□□□□ -0.78
BRCA1-208ENST00000468300 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
BRCA1-208ENST00000468300 SRP68Q9UHB9 627 aaKnown RBP10.2□□□□□ -0.78
BRCA1-208ENST00000468300 SPEF2Q9C093 1822 aa10.19□□□□□ -0.78
BRCA1-208ENST00000468300 GNPATO15228 680 aa10.19□□□□□ -0.78
BRCA1-208ENST00000468300 CLEC4GQ6UXB4 293 aa10.19□□□□□ -0.78
BRCA1-208ENST00000468300 NUTM1Q86Y26 1132 aa10.19□□□□□ -0.78
BRCA1-208ENST00000468300 TTLL11Q8NHH1 800 aa10.19□□□□□ -0.78
BRCA1-208ENST00000468300 EAF2Q96CJ1 260 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-208ENST00000468300 SIL1Q9H173 461 aa10.19□□□□□ -0.78
BRCA1-208ENST00000468300 NARFQ9UHQ1 456 aa10.19□□□□□ -0.78
BRCA1-208ENST00000468300 TNRC6CQ9HCJ0 1690 aaKnown RBP10.19□□□□□ -0.78
BRCA1-208ENST00000468300 MX1P20591 662 aa10.18□□□□□ -0.78
BRCA1-208ENST00000468300 SLC27A3Q5K4L6 730 aa10.18□□□□□ -0.78
BRCA1-208ENST00000468300 TBC1D9BQ66K14 1250 aa10.18□□□□□ -0.78
BRCA1-208ENST00000468300 ZNF594Q96JF6 807 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-208ENST00000468300 TAF1P21675 1872 aa10.18□□□□□ -0.78
BRCA1-208ENST00000468300 SDSP20132 328 aa10.18□□□□□ -0.78
BRCA1-208ENST00000468300 USPL1Q5W0Q7 1092 aa10.18□□□□□ -0.78
BRCA1-208ENST00000468300 TLR7Q9NYK1 1049 aaKnown RBP10.18□□□□□ -0.78
BRCA1-208ENST00000468300 AK9Q5TCS8 1911 aa10.18□□□□□ -0.78
BRCA1-208ENST00000468300 HMGB1P09429 215 aaKnown RBP10.18□□□□□ -0.78
BRCA1-208ENST00000468300 LRRC24Q50LG9 513 aa10.18□□□□□ -0.78
BRCA1-208ENST00000468300 HSP90AB4PQ58FF6 505 aa10.18□□□□□ -0.78
BRCA1-208ENST00000468300 TRMT112Q9UI30 125 aaKnown RBP10.18□□□□□ -0.78
BRCA1-208ENST00000468300 AOX1Q06278 1338 aa10.17□□□□□ -0.78
BRCA1-208ENST00000468300 IRS4O14654 1257 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-208ENST00000468300 PLSCR1O15162 318 aa10.17□□□□□ -0.78
BRCA1-208ENST00000468300 CTSWP56202 376 aa10.17□□□□□ -0.78
BRCA1-208ENST00000468300 ZNF592Q92610 1267 aa10.17□□□□□ -0.78
BRCA1-208ENST00000468300 PUS3Q9BZE2 481 aaKnown RBP10.17□□□□□ -0.78
BRCA1-208ENST00000468300 TXNRD1Q16881 649 aa10.17□□□□□ -0.78
BRCA1-208ENST00000468300 GREM2Q9H772 168 aa10.17□□□□□ -0.78
BRCA1-208ENST00000468300 NIP7Q9Y221 180 aaKnown RBP eCLIP10.17□□□□□ -0.78
BRCA1-208ENST00000468300 RIC1Q4ADV7 1423 aa10.17□□□□□ -0.78
BRCA1-208ENST00000468300 TFCP2Q12800 502 aa10.17□□□□□ -0.78
BRCA1-208ENST00000468300 TBC1D9Q6ZT07 1266 aa10.17□□□□□ -0.78
BRCA1-208ENST00000468300 C3orf67Q6ZVT6 689 aa10.17□□□□□ -0.78
BRCA1-208ENST00000468300 ZFP91Q96JP5 570 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-208ENST00000468300 NAP1L2Q9ULW6 460 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-208ENST00000468300 RTCBQ9Y3I0 505 aaKnown RBP10.17□□□□□ -0.78
BRCA1-208ENST00000468300 ARAP2Q8WZ64 1704 aa10.16□□□□□ -0.78
BRCA1-208ENST00000468300 PARP10Q53GL7 1025 aa10.16□□□□□ -0.78
BRCA1-208ENST00000468300 ERC1Q8IUD2 1116 aa10.16□□□□□ -0.78
BRCA1-208ENST00000468300 UTP14AQ9BVJ6 771 aaKnown RBP10.16□□□□□ -0.78
BRCA1-208ENST00000468300 PDE8AO60658 829 aa10.16□□□□□ -0.78
BRCA1-208ENST00000468300 CIAO1O76071 339 aa10.16□□□□□ -0.78
BRCA1-208ENST00000468300 ZNF827Q17R98 1081 aa10.16□□□□□ -0.78
BRCA1-208ENST00000468300 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
BRCA1-208ENST00000468300 ABCC12Q96J65 1359 aa10.15□□□□□ -0.78
BRCA1-208ENST00000468300 HCLS1P14317 486 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-208ENST00000468300 G3BP1Q13283 466 aaKnown RBP eCLIP10.15□□□□□ -0.78
BRCA1-208ENST00000468300 AK7Q96M32 723 aa10.15□□□□□ -0.78
BRCA1-208ENST00000468300 CCDC85AQ96PX6 553 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-208ENST00000468300 SH3TC1Q8TE82 1336 aa10.15□□□□□ -0.78
BRCA1-208ENST00000468300 ZNF609O15014 1411 aa10.15□□□□□ -0.78
BRCA1-208ENST00000468300 NRXN2Q9P2S2 1712 aa10.15□□□□□ -0.78
BRCA1-208ENST00000468300 EYA2O00167 538 aa10.15□□□□□ -0.79
BRCA1-208ENST00000468300 ERFEQ4G0M1 354 aa10.15□□□□□ -0.79
BRCA1-208ENST00000468300 TNNI3KQ59H18 835 aa10.15□□□□□ -0.79
BRCA1-208ENST00000468300 DBNLQ9UJU6 430 aaKnown RBP10.15□□□□□ -0.79
BRCA1-208ENST00000468300 RIPOR2Q9Y4F9 1068 aa10.15□□□□□ -0.79
BRCA1-208ENST00000468300 FPGT-TNNI3KV9GXZ4 949 aa10.15□□□□□ -0.79
BRCA1-208ENST00000468300 PHF14O94880 888 aa10.14□□□□□ -0.79
BRCA1-208ENST00000468300 ITGA6P23229 1130 aa10.14□□□□□ -0.79
BRCA1-208ENST00000468300 AACSQ86V21 672 aa10.14□□□□□ -0.79
BRCA1-208ENST00000468300 VGLL2Q8N8G2 317 aa10.14□□□□□ -0.79
BRCA1-208ENST00000468300 TTC41PQ6P2S7 1318 aa10.14□□□□□ -0.79
BRCA1-208ENST00000468300 RTL9Q8NET4 1388 aa10.14□□□□□ -0.79
BRCA1-208ENST00000468300 QSER1Q2KHR3 1735 aa10.14□□□□□ -0.79
BRCA1-208ENST00000468300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.14□□□□□ -0.79
BRCA1-208ENST00000468300 FAM177BA6PVY3 158 aa10.14□□□□□ -0.79
BRCA1-208ENST00000468300 SLC10A5Q5PT55 438 aa10.14□□□□□ -0.79
BRCA1-208ENST00000468300 CLASRPQ8N2M8 674 aaKnown RBP10.14□□□□□ -0.79
BRCA1-208ENST00000468300 CCDC8Q9H0W5 538 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-208ENST00000468300 ZNF652Q9Y2D9 606 aa10.14□□□□□ -0.79
BRCA1-208ENST00000468300 CHMP3Q9Y3E7 222 aa10.14□□□□□ -0.79
BRCA1-208ENST00000468300 APBA3O96018 575 aa10.13□□□□□ -0.79
BRCA1-208ENST00000468300 ADRA2BP18089 450 aa10.13□□□□□ -0.79
BRCA1-208ENST00000468300 OS9Q13438 667 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-208ENST00000468300 TRAPPC3LQ5T215 181 aa10.13□□□□□ -0.79
BRCA1-208ENST00000468300 IL25Q9H293 177 aa10.13□□□□□ -0.79
BRCA1-208ENST00000468300 GYS1P13807 737 aa10.13□□□□□ -0.79
BRCA1-208ENST00000468300 CNPY4Q8N129 248 aa10.13□□□□□ -0.79
BRCA1-208ENST00000468300 TBC1D32Q96NH3 1257 aa10.13□□□□□ -0.79
BRCA1-208ENST00000468300 SSFA2P28290 1259 aa10.13□□□□□ -0.79
BRCA1-208ENST00000468300 SEC31BQ9NQW1 1179 aa10.13□□□□□ -0.79
BRCA1-208ENST00000468300 ZBTB47Q9UFB7 747 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-208ENST00000468300 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-208ENST00000468300 CDC45O75419 566 aa10.12□□□□□ -0.79
BRCA1-208ENST00000468300 IL15P40933 162 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-208ENST00000468300 CCDC57Q2TAC2 916 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms