RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 HLFQ16534 295 aa12.35□□□□□ -0.43
MSH5-213ENST00000468136 BCL11AQ9H165 835 aa12.35□□□□□ -0.43
MSH5-213ENST00000468136 SNRKQ9NRH2 765 aa12.35□□□□□ -0.43
MSH5-213ENST00000468136 RPS6KA4O75676 772 aa12.34□□□□□ -0.43
MSH5-213ENST00000468136 FAM196AQ6ZSG2 479 aa12.34□□□□□ -0.43
MSH5-213ENST00000468136 ATG9AQ7Z3C6 839 aa12.34□□□□□ -0.43
MSH5-213ENST00000468136 FAM89AQ96GI7 184 aa12.34□□□□□ -0.43
MSH5-213ENST00000468136 KIF2CQ99661 725 aa12.34□□□□□ -0.43
MSH5-213ENST00000468136 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
MSH5-213ENST00000468136 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
MSH5-213ENST00000468136 TBC1D2BQ9UPU7 963 aa12.34□□□□□ -0.43
MSH5-213ENST00000468136 KCNQ2O43526 872 aa12.33□□□□□ -0.44
MSH5-213ENST00000468136 CCDC152Q4G0S7 254 aa12.33□□□□□ -0.44
MSH5-213ENST00000468136 TSHZ3Q63HK5 1081 aa12.33□□□□□ -0.44
MSH5-213ENST00000468136 ZNF772Q68DY9 489 aaPredicted RBP12.33□□□□□ -0.44
MSH5-213ENST00000468136 TTLL11Q8NHH1 800 aa12.33□□□□□ -0.44
MSH5-213ENST00000468136 HAUS7Q99871 368 aa12.33□□□□□ -0.44
MSH5-213ENST00000468136 NYXQ9GZU5 481 aa12.33□□□□□ -0.44
MSH5-213ENST00000468136 CCDC8Q9H0W5 538 aaPredicted RBP12.33□□□□□ -0.44
MSH5-213ENST00000468136 ANO2Q9NQ90 1003 aa12.33□□□□□ -0.44
MSH5-213ENST00000468136 COL5A3P25940 1745 aaPredicted RBP12.33□□□□□ -0.44
MSH5-213ENST00000468136 NUP98P52948 1817 aa12.32□□□□□ -0.44
MSH5-213ENST00000468136 K7ELQ4 463 aaPredicted RBP12.32□□□□□ -0.44
MSH5-213ENST00000468136 GPTP24298 496 aa12.32□□□□□ -0.44
MSH5-213ENST00000468136 SLC27A3Q5K4L6 730 aa12.32□□□□□ -0.44
MSH5-213ENST00000468136 CCDC158Q5M9N0 1113 aa12.32□□□□□ -0.44
MSH5-213ENST00000468136 SEPT12Q8IYM1 358 aa12.32□□□□□ -0.44
MSH5-213ENST00000468136 KLHDC4Q8TBB5 520 aa12.32□□□□□ -0.44
MSH5-213ENST00000468136 JARID2Q92833 1246 aaPredicted RBP12.32□□□□□ -0.44
MSH5-213ENST00000468136 ZNF512BQ96KM6 892 aaPredicted RBP12.32□□□□□ -0.44
MSH5-213ENST00000468136 QTRT2Q9H974 415 aaKnown RBP12.32□□□□□ -0.44
MSH5-213ENST00000468136 NARFQ9UHQ1 456 aa12.32□□□□□ -0.44
MSH5-213ENST00000468136 DBNLQ9UJU6 430 aaKnown RBP12.32□□□□□ -0.44
MSH5-213ENST00000468136 MROH5Q6ZUA9 1318 aa12.32□□□□□ -0.44
MSH5-213ENST00000468136 ZNF609O15014 1411 aa12.31□□□□□ -0.44
MSH5-213ENST00000468136 ITGA6P23229 1130 aa12.31□□□□□ -0.44
MSH5-213ENST00000468136 HSPA4P34932 840 aa12.31□□□□□ -0.44
MSH5-213ENST00000468136 CCNL1Q9UK58 526 aaPredicted RBP12.31□□□□□ -0.44
MSH5-213ENST00000468136 NIP7Q9Y221 180 aaKnown RBP eCLIP12.31□□□□□ -0.44
MSH5-213ENST00000468136 RTCBQ9Y3I0 505 aaKnown RBP12.31□□□□□ -0.44
MSH5-213ENST00000468136 UBN2Q6ZU65 1347 aa12.31□□□□□ -0.44
MSH5-213ENST00000468136 AK9Q5TCS8 1911 aa12.31□□□□□ -0.44
MSH5-213ENST00000468136 SPEF2Q9C093 1822 aa12.3□□□□□ -0.44
MSH5-213ENST00000468136 ZFYP08048 801 aaPredicted RBP12.3□□□□□ -0.44
MSH5-213ENST00000468136 SLC10A5Q5PT55 438 aa12.3□□□□□ -0.44
MSH5-213ENST00000468136 RNF20Q5VTR2 975 aa12.3□□□□□ -0.44
MSH5-213ENST00000468136 LDHAL6AQ6ZMR3 332 aa12.3□□□□□ -0.44
MSH5-213ENST00000468136 LINC00116Q8NCU8 138 aa12.3□□□□□ -0.44
MSH5-213ENST00000468136 FSD1Q9BTV5 496 aa12.3□□□□□ -0.44
MSH5-213ENST00000468136 BOLA2Q9H3K6 86 aa12.3□□□□□ -0.44
MSH5-213ENST00000468136 CNNM1Q9NRU3 951 aa12.3□□□□□ -0.44
MSH5-213ENST00000468136 CHMP5Q9NZZ3 219 aa12.3□□□□□ -0.44
MSH5-213ENST00000468136 RIPOR2Q9Y4F9 1068 aa12.3□□□□□ -0.44
MSH5-213ENST00000468136 A0A1B0GUL7 405 aa12.29□□□□□ -0.44
MSH5-213ENST00000468136 ZPR1O75312 459 aa12.29□□□□□ -0.44
MSH5-213ENST00000468136 NTSR2O95665 410 aa12.29□□□□□ -0.44
MSH5-213ENST00000468136 RTL5Q5HYW3 569 aaPredicted RBP12.29□□□□□ -0.44
MSH5-213ENST00000468136 METTL24Q5JXM2 366 aa12.29□□□□□ -0.44
MSH5-213ENST00000468136 SUSD4Q5VX71 490 aa12.29□□□□□ -0.44
MSH5-213ENST00000468136 KBTBD3Q8NAB2 608 aa12.29□□□□□ -0.44
MSH5-213ENST00000468136 KCNB2Q92953 911 aa12.29□□□□□ -0.44
MSH5-213ENST00000468136 NEUROD6Q96NK8 337 aa12.29□□□□□ -0.44
MSH5-213ENST00000468136 CDC5LQ99459 802 aaKnown RBP12.29□□□□□ -0.44
MSH5-213ENST00000468136 DBNDD2Q9BQY9 259 aa12.29□□□□□ -0.44
MSH5-213ENST00000468136 TM6SF1Q9BZW5 370 aa12.29□□□□□ -0.44
MSH5-213ENST00000468136 CWC22Q9HCG8 908 aaKnown RBP12.29□□□□□ -0.44
MSH5-213ENST00000468136 HMG20BQ9P0W2 317 aa12.29□□□□□ -0.44
MSH5-213ENST00000468136 MYH3P11055 1940 aa12.29□□□□□ -0.44
MSH5-213ENST00000468136 BCORQ6W2J9 1755 aa12.28□□□□□ -0.44
MSH5-213ENST00000468136 BTAF1O14981 1849 aa12.28□□□□□ -0.44
MSH5-213ENST00000468136 HSP90AA1P07900 732 aaKnown RBP12.28□□□□□ -0.44
MSH5-213ENST00000468136 UQCRFS1P1P0C7P4 283 aa12.28□□□□□ -0.44
MSH5-213ENST00000468136 ZKSCAN1P17029 563 aaPredicted RBP12.28□□□□□ -0.44
MSH5-213ENST00000468136 IGHMBP2P38935 993 aaKnown RBP12.28□□□□□ -0.44
MSH5-213ENST00000468136 RBM6P78332 1123 aaKnown RBP12.28□□□□□ -0.44
MSH5-213ENST00000468136 SF3B3Q15393 1217 aaKnown RBP12.28□□□□□ -0.44
MSH5-213ENST00000468136 LRRC24Q50LG9 513 aa12.28□□□□□ -0.44
MSH5-213ENST00000468136 GORABQ5T7V8 394 aa12.28□□□□□ -0.44
MSH5-213ENST00000468136 CWC27Q6UX04 472 aaKnown RBP12.28□□□□□ -0.44
MSH5-213ENST00000468136 KRT27Q7Z3Y8 459 aa12.28□□□□□ -0.44
MSH5-213ENST00000468136 LSG1Q9H089 658 aaKnown RBP12.28□□□□□ -0.44
MSH5-213ENST00000468136 GREM2Q9H772 168 aa12.28□□□□□ -0.44
MSH5-213ENST00000468136 HELLSQ9NRZ9 838 aa12.28□□□□□ -0.44
MSH5-213ENST00000468136 MYH14Q7Z406 1995 aaKnown RBP12.28□□□□□ -0.44
MSH5-213ENST00000468136 PDE8BO95263 885 aa12.27□□□□□ -0.45
MSH5-213ENST00000468136 IFIT1P09914 478 aaKnown RBP12.27□□□□□ -0.45
MSH5-213ENST00000468136 SLC4A3P48751 1232 aa12.27□□□□□ -0.45
MSH5-213ENST00000468136 TTF1Q15361 905 aaPredicted RBP12.27□□□□□ -0.45
MSH5-213ENST00000468136 PUM3Q15397 648 aaKnown RBP12.27□□□□□ -0.45
MSH5-213ENST00000468136 ATP2B3Q16720 1220 aa12.27□□□□□ -0.45
MSH5-213ENST00000468136 TTC39AQ5SRH9 613 aa12.27□□□□□ -0.45
MSH5-213ENST00000468136 ZSCAN25Q6NSZ9 544 aa12.27□□□□□ -0.45
MSH5-213ENST00000468136 LPIN2Q92539 896 aa12.27□□□□□ -0.45
MSH5-213ENST00000468136 MPHOSPH8Q99549 860 aa12.27□□□□□ -0.45
MSH5-213ENST00000468136 ANTXR1Q9H6X2 564 aa12.27□□□□□ -0.45
MSH5-213ENST00000468136 PAG1Q9NWQ8 432 aa12.27□□□□□ -0.45
MSH5-213ENST00000468136 TLR7Q9NYK1 1049 aaKnown RBP12.27□□□□□ -0.45
MSH5-213ENST00000468136 LY75O60449 1722 aa12.27□□□□□ -0.45
MSH5-213ENST00000468136 LRP5O75197 1615 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 LAMB2P55268 1798 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms