RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 SOS2Q07890 1332 aaPredicted RBP6.98□□□□□ -1.29
TRIM27-204ENST00000467742 LMO7Q8WWI1 1683 aa6.97□□□□□ -1.29
TRIM27-204ENST00000467742 RNF20Q5VTR2 975 aa6.97□□□□□ -1.29
TRIM27-204ENST00000467742 SLC16A10Q8TF71 515 aa6.97□□□□□ -1.29
TRIM27-204ENST00000467742 TESK2Q96S53 571 aa6.97□□□□□ -1.29
TRIM27-204ENST00000467742 NWD2Q9ULI1 1742 aa6.97□□□□□ -1.29
TRIM27-204ENST00000467742 POLR3AO14802 1390 aaPredicted RBP6.96□□□□□ -1.29
TRIM27-204ENST00000467742 COL18A1P39060 1754 aa6.96□□□□□ -1.3
TRIM27-204ENST00000467742 ERVH48-1M5A8F1 160 aa6.96□□□□□ -1.3
TRIM27-204ENST00000467742 SPINT1O43278 529 aa6.96□□□□□ -1.3
TRIM27-204ENST00000467742 XPCQ01831 940 aaPredicted RBP6.96□□□□□ -1.3
TRIM27-204ENST00000467742 CBLBQ13191 982 aa6.96□□□□□ -1.3
TRIM27-204ENST00000467742 ZNF784Q8NCA9 323 aaPredicted RBP6.96□□□□□ -1.3
TRIM27-204ENST00000467742 NFATC2IPQ8NCF5 419 aa6.96□□□□□ -1.3
TRIM27-204ENST00000467742 CEP126Q9P2H0 1117 aa6.96□□□□□ -1.3
TRIM27-204ENST00000467742 SLIT3O75094 1523 aa6.96□□□□□ -1.3
TRIM27-204ENST00000467742 COL14A1Q05707 1796 aaKnown RBP6.95□□□□□ -1.3
TRIM27-204ENST00000467742 USP6P35125 1406 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 EP400Q96L91 3159 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 ST20-MTHFSA0A0A6YYL1 179 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 WIPF1O43516 503 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 MAN1A2O60476 641 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 SLFNL1Q499Z3 407 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 ESCO1Q5FWF5 840 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 PMFBP1Q8TBY8 1022 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 ADAMTS19Q8TE59 1207 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 CDK19Q9BWU1 502 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 NFAT5O94916 1531 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 RGPD2P0DJD1 1756 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 JCADQ9P266 1359 aa6.95□□□□□ -1.3
TRIM27-204ENST00000467742 CPSF1Q10570 1443 aaKnown RBP6.94□□□□□ -1.3
TRIM27-204ENST00000467742 SSH2Q76I76 1423 aa6.94□□□□□ -1.3
TRIM27-204ENST00000467742 PEAK1Q9H792 1746 aa6.94□□□□□ -1.3
TRIM27-204ENST00000467742 TTLL8A6PVC2 850 aa6.94□□□□□ -1.3
TRIM27-204ENST00000467742 H3BM21 787 aa6.94□□□□□ -1.3
TRIM27-204ENST00000467742 LILRA1O75019 489 aa6.94□□□□□ -1.3
TRIM27-204ENST00000467742 ADH1AP07327 375 aa6.94□□□□□ -1.3
TRIM27-204ENST00000467742 RAB15P59190 212 aa6.94□□□□□ -1.3
TRIM27-204ENST00000467742 NUDT16Q96DE0 195 aaKnown RBP6.94□□□□□ -1.3
TRIM27-204ENST00000467742 C1orf115Q9H7X2 142 aa6.94□□□□□ -1.3
TRIM27-204ENST00000467742 TMPRSS4Q9NRS4 437 aa6.94□□□□□ -1.3
TRIM27-204ENST00000467742 A0A1W2PP64 1363 aa6.94□□□□□ -1.3
TRIM27-204ENST00000467742 BRWD3Q6RI45 1802 aa6.93□□□□□ -1.3
TRIM27-204ENST00000467742 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
TRIM27-204ENST00000467742 FOXO3O43524 673 aa6.93□□□□□ -1.3
TRIM27-204ENST00000467742 LZTS3O60299 673 aaPredicted RBP6.93□□□□□ -1.3
TRIM27-204ENST00000467742 HSPA5P11021 654 aaKnown RBP6.93□□□□□ -1.3
TRIM27-204ENST00000467742 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.93□□□□□ -1.3
TRIM27-204ENST00000467742 CCDC82Q8N4S0 544 aa6.93□□□□□ -1.3
TRIM27-204ENST00000467742 IRF7Q92985 503 aa6.93□□□□□ -1.3
TRIM27-204ENST00000467742 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
TRIM27-204ENST00000467742 DNMT3LQ9UJW3 386 aa6.93□□□□□ -1.3
TRIM27-204ENST00000467742 NPHP3Q7Z494 1330 aa6.93□□□□□ -1.3
TRIM27-204ENST00000467742 SBNO1A3KN83 1393 aa6.93□□□□□ -1.3
TRIM27-204ENST00000467742 ATAD2Q6PL18 1390 aa6.93□□□□□ -1.3
TRIM27-204ENST00000467742 GLI3P10071 1580 aa6.92□□□□□ -1.3
TRIM27-204ENST00000467742 SOBPA7XYQ1 873 aa6.92□□□□□ -1.3
TRIM27-204ENST00000467742 GIGYF1O75420 1035 aaPredicted RBP6.92□□□□□ -1.3
TRIM27-204ENST00000467742 SRPK2P78362 688 aaKnown RBP6.92□□□□□ -1.3
TRIM27-204ENST00000467742 MAP7D1Q3KQU3 841 aa6.92□□□□□ -1.3
TRIM27-204ENST00000467742 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
TRIM27-204ENST00000467742 RNF135Q8IUD6 432 aa6.92□□□□□ -1.3
TRIM27-204ENST00000467742 ACEP12821 1306 aa6.92□□□□□ -1.3
TRIM27-204ENST00000467742 SPATA31A3Q5VYP0 1347 aa6.92□□□□□ -1.3
TRIM27-204ENST00000467742 EVC2Q86UK5 1308 aa6.92□□□□□ -1.3
TRIM27-204ENST00000467742 VSIG8P0DPA2 414 aa6.91□□□□□ -1.3
TRIM27-204ENST00000467742 PHTF2Q8N3S3 785 aa6.91□□□□□ -1.3
TRIM27-204ENST00000467742 PPP1R12CQ9BZL4 782 aa6.91□□□□□ -1.3
TRIM27-204ENST00000467742 OVOS2A0A0J9YW53 1432 aa6.91□□□□□ -1.3
TRIM27-204ENST00000467742 OVOS2Q6IE36 1432 aa6.91□□□□□ -1.3
TRIM27-204ENST00000467742 FAM208AQ9UK61 1670 aaKnown RBP6.9□□□□□ -1.3
TRIM27-204ENST00000467742 CAMTA1Q9Y6Y1 1673 aa6.9□□□□□ -1.3
TRIM27-204ENST00000467742 MAP2P11137 1827 aaKnown RBP6.9□□□□□ -1.3
TRIM27-204ENST00000467742 ATP9BO43861 1147 aa6.9□□□□□ -1.3
TRIM27-204ENST00000467742 ERVK-9P63128 1117 aa6.9□□□□□ -1.3
TRIM27-204ENST00000467742 RELBQ01201 579 aa6.9□□□□□ -1.3
TRIM27-204ENST00000467742 CC2D2BQ6DHV5 1058 aa6.9□□□□□ -1.3
TRIM27-204ENST00000467742 KRT28Q7Z3Y7 464 aa6.9□□□□□ -1.3
TRIM27-204ENST00000467742 AGBL1Q96MI9 1066 aa6.9□□□□□ -1.3
TRIM27-204ENST00000467742 UCN2Q96RP3 112 aa6.9□□□□□ -1.3
TRIM27-204ENST00000467742 CYLDQ9NQC7 956 aa6.9□□□□□ -1.3
TRIM27-204ENST00000467742 EDC4Q6P2E9 1401 aaKnown RBP6.9□□□□□ -1.31
TRIM27-204ENST00000467742 SHANK3Q9BYB0 1731 aa6.9□□□□□ -1.31
TRIM27-204ENST00000467742 PALM3A6NDB9 673 aaPredicted RBP6.89□□□□□ -1.31
TRIM27-204ENST00000467742 PTGIRP43119 386 aa6.89□□□□□ -1.31
TRIM27-204ENST00000467742 INSM1Q01101 510 aaPredicted RBP6.89□□□□□ -1.31
TRIM27-204ENST00000467742 PLEKHM2Q8IWE5 1019 aa6.89□□□□□ -1.31
TRIM27-204ENST00000467742 CABP1Q9NZU7 370 aa6.89□□□□□ -1.31
TRIM27-204ENST00000467742 KTN1Q86UP2 1357 aaKnown RBP6.89□□□□□ -1.31
TRIM27-204ENST00000467742 ANKRD36BQ8N2N9 1353 aa6.89□□□□□ -1.31
TRIM27-204ENST00000467742 SLIT2O94813 1529 aa6.89□□□□□ -1.31
TRIM27-204ENST00000467742 THSD7AQ9UPZ6 1657 aa6.89□□□□□ -1.31
TRIM27-204ENST00000467742 LRRC37A3O60309 1634 aa6.88□□□□□ -1.31
TRIM27-204ENST00000467742 ABCC6O95255 1503 aa6.88□□□□□ -1.31
TRIM27-204ENST00000467742 ARHGEF10O15013 1369 aa6.88□□□□□ -1.31
TRIM27-204ENST00000467742 USP19O94966 1318 aa6.88□□□□□ -1.31
TRIM27-204ENST00000467742 SPATA31A6Q5VVP1 1343 aa6.88□□□□□ -1.31
TRIM27-204ENST00000467742 SKIP12755 728 aa6.88□□□□□ -1.31
TRIM27-204ENST00000467742 ADD1P35611 737 aaKnown RBP6.88□□□□□ -1.31
TRIM27-204ENST00000467742 CTSOP43234 321 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms