RNA–Protein interactions for RNA: ENST00000467301.1

LIMK2-208, Transcript of LIM domain kinase 2, humanhuman

TSL 3

Gene LIMK2, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-208ENST00000467301 LTBP1Q14766 1721 aa17.55■□□□□ 0.4
LIMK2-208ENST00000467301 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
LIMK2-208ENST00000467301 CCDC30Q5VVM6 783 aa17.55■□□□□ 0.4
LIMK2-208ENST00000467301 ADAMTSL1Q8N6G6 1762 aa17.54■□□□□ 0.4
LIMK2-208ENST00000467301 PNMA8AQ86V59 439 aaPredicted RBP17.54■□□□□ 0.4
LIMK2-208ENST00000467301 TSPYL6Q8N831 410 aa17.54■□□□□ 0.4
LIMK2-208ENST00000467301 MKRN1Q9UHC7 482 aaKnown RBP17.54■□□□□ 0.4
LIMK2-208ENST00000467301 SALL2Q9Y467 1007 aaPredicted RBP17.54■□□□□ 0.4
LIMK2-208ENST00000467301 LRRC37AA6NMS7 1700 aa17.54■□□□□ 0.4
LIMK2-208ENST00000467301 DDX58O95786 925 aaKnown RBP17.53■□□□□ 0.4
LIMK2-208ENST00000467301 MAP1SQ66K74 1059 aaPredicted RBP17.53■□□□□ 0.4
LIMK2-208ENST00000467301 JMYQ8N9B5 988 aa17.53■□□□□ 0.4
LIMK2-208ENST00000467301 CREBZFQ9NS37 354 aa17.53■□□□□ 0.4
LIMK2-208ENST00000467301 PCNTO95613 3336 aa17.53■□□□□ 0.4
LIMK2-208ENST00000467301 TMC4Q7Z404 712 aa17.52■□□□□ 0.4
LIMK2-208ENST00000467301 WWC1Q8IX03 1113 aa17.52■□□□□ 0.4
LIMK2-208ENST00000467301 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.4
LIMK2-208ENST00000467301 CELF1Q92879 486 aaKnown RBP17.52■□□□□ 0.4
LIMK2-208ENST00000467301 STK31Q9BXU1 1019 aa17.52■□□□□ 0.4
LIMK2-208ENST00000467301 CHMP4AQ9BY43 222 aa17.52■□□□□ 0.4
LIMK2-208ENST00000467301 ZNRF3Q9ULT6 936 aa17.52■□□□□ 0.4
LIMK2-208ENST00000467301 COL4A1P02462 1669 aa17.52■□□□□ 0.39
LIMK2-208ENST00000467301 EPS15P42566 896 aa17.51■□□□□ 0.39
LIMK2-208ENST00000467301 SCNN1DP51172 638 aa17.51■□□□□ 0.39
LIMK2-208ENST00000467301 SF3B3Q15393 1217 aaKnown RBP17.51■□□□□ 0.39
LIMK2-208ENST00000467301 ZBTB38Q8NAP3 1195 aaPredicted RBP17.51■□□□□ 0.39
LIMK2-208ENST00000467301 CCDC85AQ96PX6 553 aaPredicted RBP17.51■□□□□ 0.39
LIMK2-208ENST00000467301 RTFDC1Q9BY42 306 aaPredicted RBP17.51■□□□□ 0.39
LIMK2-208ENST00000467301 VPS33BQ9H267 617 aa17.51■□□□□ 0.39
LIMK2-208ENST00000467301 DUOX1Q9NRD9 1551 aa17.51■□□□□ 0.39
LIMK2-208ENST00000467301 CWC25Q9NXE8 425 aaPredicted RBP17.51■□□□□ 0.39
LIMK2-208ENST00000467301 NSFL1CQ9UNZ2 370 aaKnown RBP17.51■□□□□ 0.39
LIMK2-208ENST00000467301 MAP3K2Q9Y2U5 619 aa17.51■□□□□ 0.39
LIMK2-208ENST00000467301 PASKQ96RG2 1323 aa17.5■□□□□ 0.39
LIMK2-208ENST00000467301 RAD17O75943 681 aa17.5■□□□□ 0.39
LIMK2-208ENST00000467301 KIAA2012Q0VF49 1180 aa17.5■□□□□ 0.39
LIMK2-208ENST00000467301 TRIM28Q13263 835 aaKnown RBP17.5■□□□□ 0.39
LIMK2-208ENST00000467301 CCDC27Q2M243 656 aa17.5■□□□□ 0.39
LIMK2-208ENST00000467301 TWISTNBQ3B726 338 aaPredicted RBP17.5■□□□□ 0.39
LIMK2-208ENST00000467301 IFFO2Q5TF58 517 aa17.5■□□□□ 0.39
LIMK2-208ENST00000467301 CNTROBQ8N137 903 aa17.5■□□□□ 0.39
LIMK2-208ENST00000467301 TMEM88BA6NKF7 163 aa17.49■□□□□ 0.39
LIMK2-208ENST00000467301 C6orf229H3BNL8 230 aa17.49■□□□□ 0.39
LIMK2-208ENST00000467301 RIMBP2O15034 1052 aa17.49■□□□□ 0.39
LIMK2-208ENST00000467301 HSP90B1P14625 803 aaKnown RBP17.49■□□□□ 0.39
LIMK2-208ENST00000467301 CXCL9Q07325 125 aa17.49■□□□□ 0.39
LIMK2-208ENST00000467301 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
LIMK2-208ENST00000467301 METTL22Q9BUU2 404 aaPredicted RBP17.49■□□□□ 0.39
LIMK2-208ENST00000467301 BCL2L13Q9BXK5 485 aa17.49■□□□□ 0.39
LIMK2-208ENST00000467301 SPEF2Q9C093 1822 aa17.49■□□□□ 0.39
LIMK2-208ENST00000467301 ITGBL1O95965 494 aaPredicted RBP17.48■□□□□ 0.39
LIMK2-208ENST00000467301 GMPSP49915 693 aaPredicted RBP17.48■□□□□ 0.39
LIMK2-208ENST00000467301 CIAPIN1Q6FI81 312 aa17.48■□□□□ 0.39
LIMK2-208ENST00000467301 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
LIMK2-208ENST00000467301 HSPA1AP0DMV8 641 aaKnown RBP17.47■□□□□ 0.39
LIMK2-208ENST00000467301 HSPA1BP0DMV9 641 aaKnown RBP17.47■□□□□ 0.39
LIMK2-208ENST00000467301 GPSM2P81274 684 aa17.47■□□□□ 0.39
LIMK2-208ENST00000467301 WASHC4Q2M389 1173 aa17.47■□□□□ 0.39
LIMK2-208ENST00000467301 CCDC152Q4G0S7 254 aa17.47■□□□□ 0.39
LIMK2-208ENST00000467301 GPR101Q96P66 508 aaPredicted RBP17.47■□□□□ 0.39
LIMK2-208ENST00000467301 SEC31BQ9NQW1 1179 aa17.47■□□□□ 0.39
LIMK2-208ENST00000467301 GPRC5DQ9NZD1 345 aa17.47■□□□□ 0.39
LIMK2-208ENST00000467301 MYH3P11055 1940 aa17.47■□□□□ 0.39
LIMK2-208ENST00000467301 PI4KAP2A4QPH2 592 aa17.46■□□□□ 0.39
LIMK2-208ENST00000467301 RPS8P62241 208 aaKnown RBP17.46■□□□□ 0.39
LIMK2-208ENST00000467301 NEXNQ0ZGT2 675 aa17.46■□□□□ 0.39
LIMK2-208ENST00000467301 TNIP1Q15025 636 aa17.46■□□□□ 0.39
LIMK2-208ENST00000467301 KSR2Q6VAB6 950 aa17.46■□□□□ 0.39
LIMK2-208ENST00000467301 USP50Q70EL3 339 aaPredicted RBP17.46■□□□□ 0.39
LIMK2-208ENST00000467301 PI4KAP1Q8N8J0 262 aa17.46■□□□□ 0.39
LIMK2-208ENST00000467301 DBNDD1Q9H9R9 158 aa17.46■□□□□ 0.39
LIMK2-208ENST00000467301 ADARB2Q9NS39 739 aaKnown RBP17.46■□□□□ 0.39
LIMK2-208ENST00000467301 IL16Q14005 1332 aa17.46■□□□□ 0.38
LIMK2-208ENST00000467301 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.38
LIMK2-208ENST00000467301 CNTNAP1P78357 1384 aa17.45■□□□□ 0.38
LIMK2-208ENST00000467301 PDE8AO60658 829 aa17.45■□□□□ 0.38
LIMK2-208ENST00000467301 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
LIMK2-208ENST00000467301 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
LIMK2-208ENST00000467301 ANKIB1Q9P2G1 1089 aa17.45■□□□□ 0.38
LIMK2-208ENST00000467301 ABT1Q9ULW3 272 aaKnown RBP17.45■□□□□ 0.38
LIMK2-208ENST00000467301 YDJCA8MPS7 323 aa17.44■□□□□ 0.38
LIMK2-208ENST00000467301 DOK7Q18PE1 504 aa17.44■□□□□ 0.38
LIMK2-208ENST00000467301 G2E3Q7L622 706 aa17.44■□□□□ 0.38
LIMK2-208ENST00000467301 EYA3Q99504 573 aa17.44■□□□□ 0.38
LIMK2-208ENST00000467301 POLLQ9UGP5 575 aa17.44■□□□□ 0.38
LIMK2-208ENST00000467301 TRPM7Q96QT4 1865 aa17.44■□□□□ 0.38
LIMK2-208ENST00000467301 G3V3G9 751 aa17.43■□□□□ 0.38
LIMK2-208ENST00000467301 UFL1O94874 794 aa17.43■□□□□ 0.38
LIMK2-208ENST00000467301 CWF19L2Q2TBE0 894 aaKnown RBP17.43■□□□□ 0.38
LIMK2-208ENST00000467301 DCAF8Q5TAQ9 597 aa17.43■□□□□ 0.38
LIMK2-208ENST00000467301 PAXIP1Q6ZW49 1069 aaPredicted RBP17.43■□□□□ 0.38
LIMK2-208ENST00000467301 TRAF5O00463 557 aa17.42■□□□□ 0.38
LIMK2-208ENST00000467301 ECE2O60344 883 aa17.42■□□□□ 0.38
LIMK2-208ENST00000467301 IGKV5-2P06315 115 aa17.42■□□□□ 0.38
LIMK2-208ENST00000467301 FMR1Q06787 632 aaKnown RBP eCLIP17.42■□□□□ 0.383e-12■■■■■ 43.2
LIMK2-208ENST00000467301 FKBP5Q13451 457 aaPredicted RBP17.42■□□□□ 0.38
LIMK2-208ENST00000467301 COL13A1Q5TAT6 717 aaPredicted RBP17.42■□□□□ 0.38
LIMK2-208ENST00000467301 ANKRD18AQ8IVF6 992 aa17.42■□□□□ 0.38
LIMK2-208ENST00000467301 TBC1D16Q8TBP0 767 aa17.42■□□□□ 0.38
LIMK2-208ENST00000467301 ZBTB12Q9Y330 459 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms