RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 DLL1O00548 723 aa9.57□□□□□ -0.88
XRN1-206ENST00000467077 C21orf2O43822 256 aa9.57□□□□□ -0.88
XRN1-206ENST00000467077 DEAF1O75398 565 aaPredicted RBP9.57□□□□□ -0.88
XRN1-206ENST00000467077 EIF2AK2P19525 551 aaKnown RBP9.57□□□□□ -0.88
XRN1-206ENST00000467077 SIX5Q8N196 739 aa9.57□□□□□ -0.88
XRN1-206ENST00000467077 SCG3Q8WXD2 468 aaKnown RBP9.57□□□□□ -0.88
XRN1-206ENST00000467077 COG6Q9Y2V7 657 aa9.57□□□□□ -0.88
XRN1-206ENST00000467077 RNF114Q9Y508 228 aa9.57□□□□□ -0.88
XRN1-206ENST00000467077 RARAP10276 462 aa9.56□□□□□ -0.88
XRN1-206ENST00000467077 TAL1P17542 331 aaPredicted RBP9.56□□□□□ -0.88
XRN1-206ENST00000467077 GP2P55259 537 aaKnown RBP9.56□□□□□ -0.88
XRN1-206ENST00000467077 PLAURQ03405 335 aa9.56□□□□□ -0.88
XRN1-206ENST00000467077 SRA1Q9HD15 236 aaKnown RBP9.55□□□□□ -0.88
XRN1-206ENST00000467077 F8W735 103 aaPredicted RBP9.54□□□□□ -0.88
XRN1-206ENST00000467077 ALX3O95076 343 aa9.54□□□□□ -0.88
XRN1-206ENST00000467077 GLB1P16278 677 aa9.54□□□□□ -0.88
XRN1-206ENST00000467077 IDH3AP50213 366 aa9.54□□□□□ -0.88
XRN1-206ENST00000467077 TMEM130Q8N3G9 435 aa9.54□□□□□ -0.88
XRN1-206ENST00000467077 ZFATQ9P243 1243 aa9.54□□□□□ -0.88
XRN1-206ENST00000467077 MKRN1Q9UHC7 482 aaKnown RBP9.54□□□□□ -0.88
XRN1-206ENST00000467077 RAXQ9Y2V3 346 aa9.54□□□□□ -0.88
XRN1-206ENST00000467077 OAS3Q9Y6K5 1087 aaKnown RBP9.54□□□□□ -0.88
XRN1-206ENST00000467077 KIAA1324LA8MWY0 1029 aaPredicted RBP9.53□□□□□ -0.88
XRN1-206ENST00000467077 ZBTB42B2RXF5 422 aa9.53□□□□□ -0.88
XRN1-206ENST00000467077 IGLV1-40P01703 118 aa9.53□□□□□ -0.88
XRN1-206ENST00000467077 ARSDP51689 593 aa9.53□□□□□ -0.88
XRN1-206ENST00000467077 TGFB1P01137 390 aa9.52□□□□□ -0.89
XRN1-206ENST00000467077 MAP4K3Q8IVH8 894 aa9.52□□□□□ -0.89
XRN1-206ENST00000467077 DMGDHQ9UI17 866 aaKnown RBP9.52□□□□□ -0.89
XRN1-206ENST00000467077 ATP9BO43861 1147 aa9.51□□□□□ -0.89
XRN1-206ENST00000467077 TARSP26639 723 aaKnown RBP9.51□□□□□ -0.89
XRN1-206ENST00000467077 GRIK1P39086 918 aa9.51□□□□□ -0.89
XRN1-206ENST00000467077 NRLP54845 237 aa9.51□□□□□ -0.89
XRN1-206ENST00000467077 HFE2Q6ZVN8 426 aa9.51□□□□□ -0.89
XRN1-206ENST00000467077 C11orf16Q9NQ32 467 aa9.51□□□□□ -0.89
XRN1-206ENST00000467077 RASA1P20936 1047 aa9.5□□□□□ -0.89
XRN1-206ENST00000467077 INPP5BP32019 993 aa9.5□□□□□ -0.89
XRN1-206ENST00000467077 GDF6Q6KF10 455 aaPredicted RBP9.5□□□□□ -0.89
XRN1-206ENST00000467077 IFT43Q96FT9 208 aa9.5□□□□□ -0.89
XRN1-206ENST00000467077 RBSNQ9H1K0 784 aa9.5□□□□□ -0.89
XRN1-206ENST00000467077 STOML1Q9UBI4 398 aa9.5□□□□□ -0.89
XRN1-206ENST00000467077 BCS1LQ9Y276 419 aa9.5□□□□□ -0.89
XRN1-206ENST00000467077 SASH3O75995 380 aa9.49□□□□□ -0.89
XRN1-206ENST00000467077 GHRHP01286 108 aa9.49□□□□□ -0.89
XRN1-206ENST00000467077 SEC13P55735 322 aa9.49□□□□□ -0.89
XRN1-206ENST00000467077 Q6ZS46 218 aa9.49□□□□□ -0.89
XRN1-206ENST00000467077 PLD4Q96BZ4 506 aa9.49□□□□□ -0.89
XRN1-206ENST00000467077 DHX15O43143 795 aaKnown RBP9.48□□□□□ -0.89
XRN1-206ENST00000467077 GRNP28799 593 aaKnown RBP9.48□□□□□ -0.89
XRN1-206ENST00000467077 AGGF1Q8N302 714 aaeCLIP9.48□□□□□ -0.89
XRN1-206ENST00000467077 IL22RA1Q8N6P7 574 aa9.48□□□□□ -0.89
XRN1-206ENST00000467077 RAD21O60216 631 aa9.47□□□□□ -0.89
XRN1-206ENST00000467077 INTS5Q6P9B9 1019 aaKnown RBP9.47□□□□□ -0.89
XRN1-206ENST00000467077 HINFPQ9BQA5 517 aa9.47□□□□□ -0.89
XRN1-206ENST00000467077 KLK14Q9P0G3 267 aa9.47□□□□□ -0.89
XRN1-206ENST00000467077 MED26O95402 600 aa9.46□□□□□ -0.9
XRN1-206ENST00000467077 PSAPP07602 524 aa9.46□□□□□ -0.9
XRN1-206ENST00000467077 FZD5Q13467 585 aa9.46□□□□□ -0.9
XRN1-206ENST00000467077 TLR7Q9NYK1 1049 aaKnown RBP9.46□□□□□ -0.9
XRN1-206ENST00000467077 DGKZQ13574 1117 aa9.45□□□□□ -0.9
XRN1-206ENST00000467077 LCE1DQ5T752 114 aa9.45□□□□□ -0.9
XRN1-206ENST00000467077 UCN2Q96RP3 112 aa9.45□□□□□ -0.9
XRN1-206ENST00000467077 CEP41Q9BYV8 373 aa9.45□□□□□ -0.9
XRN1-206ENST00000467077 IGFBP4P22692 258 aa9.44□□□□□ -0.9
XRN1-206ENST00000467077 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.44□□□□□ -0.9
XRN1-206ENST00000467077 MUC3BQ9H195 1237 aa9.44□□□□□ -0.9
XRN1-206ENST00000467077 DKK1O94907 266 aa9.43□□□□□ -0.9
XRN1-206ENST00000467077 NFIAQ12857 509 aa9.43□□□□□ -0.9
XRN1-206ENST00000467077 NSUN5Q96P11 429 aaKnown RBP9.43□□□□□ -0.9
XRN1-206ENST00000467077 ARID1BQ8NFD5 2236 aaPredicted RBP9.43□□□□□ -0.9
XRN1-206ENST00000467077 LOC102724428A0A0B4J2F2 783 aa9.42□□□□□ -0.9
XRN1-206ENST00000467077 POM121CA8CG34 1229 aa9.42□□□□□ -0.9
XRN1-206ENST00000467077 MICAL2O94851 1124 aa9.42□□□□□ -0.9
XRN1-206ENST00000467077 SPINK2P20155 84 aa9.42□□□□□ -0.9
XRN1-206ENST00000467077 SIK1P57059 783 aa9.42□□□□□ -0.9
XRN1-206ENST00000467077 SETDB1Q15047 1291 aa9.42□□□□□ -0.9
XRN1-206ENST00000467077 UVSSAQ2YD98 709 aa9.42□□□□□ -0.9
XRN1-206ENST00000467077 ZDHHC13Q8IUH4 622 aa9.42□□□□□ -0.9
XRN1-206ENST00000467077 CACTIN-AS1Q8N1I8 211 aa9.42□□□□□ -0.9
XRN1-206ENST00000467077 ADAMTS19Q8TE59 1207 aa9.42□□□□□ -0.9
XRN1-206ENST00000467077 UTP4Q969X6 686 aaKnown RBP9.42□□□□□ -0.9
XRN1-206ENST00000467077 KRTAP4-7Q9BYR0 210 aa9.42□□□□□ -0.9
XRN1-206ENST00000467077 J3QW42 95 aa9.41□□□□□ -0.9
XRN1-206ENST00000467077 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
XRN1-206ENST00000467077 VTI1AQ96AJ9 217 aa9.41□□□□□ -0.9
XRN1-206ENST00000467077 XYLBO75191 536 aa9.4□□□□□ -0.9
XRN1-206ENST00000467077 WNT11O96014 354 aa9.4□□□□□ -0.9
XRN1-206ENST00000467077 HDGFL1Q5TGJ6 251 aa9.4□□□□□ -0.9
XRN1-206ENST00000467077 ACAD11Q709F0 780 aa9.4□□□□□ -0.9
XRN1-206ENST00000467077 POM121Q96HA1 1249 aa9.4□□□□□ -0.9
XRN1-206ENST00000467077 UBL7Q96S82 380 aaPredicted RBP9.4□□□□□ -0.9
XRN1-206ENST00000467077 DBNDD2Q9BQY9 259 aa9.4□□□□□ -0.9
XRN1-206ENST00000467077 RTCBQ9Y3I0 505 aaKnown RBP9.4□□□□□ -0.9
XRN1-206ENST00000467077 PPME1Q9Y570 386 aa9.39□□□□□ -0.91
XRN1-206ENST00000467077 EGFRP00533 1210 aa9.38□□□□□ -0.91
XRN1-206ENST00000467077 SOX18P35713 384 aa9.38□□□□□ -0.91
XRN1-206ENST00000467077 C11orf91Q3C1V1 193 aa9.38□□□□□ -0.91
XRN1-206ENST00000467077 C7orf69Q9H7B7 122 aa9.38□□□□□ -0.91
XRN1-206ENST00000467077 TRIM33Q9UPN9 1127 aa9.38□□□□□ -0.91
XRN1-206ENST00000467077 LGR5O75473 907 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms