RNA–Protein interactions for RNA: ENST00000466822.1

ABCD4-204, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-204ENST00000466822 DPY19L2Q6NUT2 758 aa18.28■□□□□ 0.52
ABCD4-204ENST00000466822 COL11A2P13942 1736 aaPredicted RBP18.28■□□□□ 0.52
ABCD4-204ENST00000466822 ZBED9Q6R2W3 1325 aa18.27■□□□□ 0.52
ABCD4-204ENST00000466822 RPS8P62241 208 aaKnown RBP18.27■□□□□ 0.52
ABCD4-204ENST00000466822 RTL5Q5HYW3 569 aaPredicted RBP18.27■□□□□ 0.52
ABCD4-204ENST00000466822 SRCIN1Q9C0H9 1055 aa18.27■□□□□ 0.52
ABCD4-204ENST00000466822 SLX4Q8IY92 1834 aa18.27■□□□□ 0.52
ABCD4-204ENST00000466822 SMC4Q9NTJ3 1288 aa18.26■□□□□ 0.51
ABCD4-204ENST00000466822 CTSWP56202 376 aa18.25■□□□□ 0.51
ABCD4-204ENST00000466822 UBE3BQ7Z3V4 1068 aa18.25■□□□□ 0.51
ABCD4-204ENST00000466822 ARHGAP45Q92619 1136 aa18.25■□□□□ 0.51
ABCD4-204ENST00000466822 CDC5LQ99459 802 aaKnown RBP18.25■□□□□ 0.51
ABCD4-204ENST00000466822 RTFDC1Q9BY42 306 aaPredicted RBP18.25■□□□□ 0.51
ABCD4-204ENST00000466822 TNRC6CQ9HCJ0 1690 aaKnown RBP18.25■□□□□ 0.51
ABCD4-204ENST00000466822 GLTPD2A6NH11 291 aa18.24■□□□□ 0.51
ABCD4-204ENST00000466822 F6X3S4 739 aa18.24■□□□□ 0.51
ABCD4-204ENST00000466822 MPNDQ8N594 471 aa18.24■□□□□ 0.51
ABCD4-204ENST00000466822 TTLL11Q8NHH1 800 aa18.24■□□□□ 0.51
ABCD4-204ENST00000466822 RTL9Q8NET4 1388 aa18.24■□□□□ 0.51
ABCD4-204ENST00000466822 GRM8O00222 908 aa18.23■□□□□ 0.51
ABCD4-204ENST00000466822 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
ABCD4-204ENST00000466822 CSF1RP07333 972 aa18.23■□□□□ 0.51
ABCD4-204ENST00000466822 IARSP41252 1262 aaKnown RBP18.23■□□□□ 0.51
ABCD4-204ENST00000466822 RARSP54136 660 aaKnown RBP18.23■□□□□ 0.51
ABCD4-204ENST00000466822 CASP7P55210 303 aa18.23■□□□□ 0.51
ABCD4-204ENST00000466822 SLC4A10Q6U841 1118 aa18.23■□□□□ 0.51
ABCD4-204ENST00000466822 DPP8Q6V1X1 898 aaPredicted RBP18.23■□□□□ 0.51
ABCD4-204ENST00000466822 JDP2Q8WYK2 163 aa18.23■□□□□ 0.51
ABCD4-204ENST00000466822 API5Q9BZZ5 524 aaKnown RBP18.23■□□□□ 0.51
ABCD4-204ENST00000466822 C9orf78Q9NZ63 289 aaPredicted RBP18.23■□□□□ 0.51
ABCD4-204ENST00000466822 KIF16BQ96L93 1317 aa18.23■□□□□ 0.51
ABCD4-204ENST00000466822 FER1L6Q2WGJ9 1857 aa18.22■□□□□ 0.51
ABCD4-204ENST00000466822 PRELPP51888 382 aa18.22■□□□□ 0.51
ABCD4-204ENST00000466822 HDAC5Q9UQL6 1122 aa18.22■□□□□ 0.51
ABCD4-204ENST00000466822 SNED1Q8TER0 1413 aa18.22■□□□□ 0.51
ABCD4-204ENST00000466822 ANKRD18AQ8IVF6 992 aa18.21■□□□□ 0.51
ABCD4-204ENST00000466822 CELF1Q92879 486 aaKnown RBP18.21■□□□□ 0.51
ABCD4-204ENST00000466822 ZNF277Q9NRM2 450 aaPredicted RBP18.21■□□□□ 0.51
ABCD4-204ENST00000466822 CCT4P50991 539 aaKnown RBP18.2■□□□□ 0.5
ABCD4-204ENST00000466822 OLFM4Q6UX06 510 aa18.2■□□□□ 0.5
ABCD4-204ENST00000466822 PODXL2Q9NZ53 605 aa18.2■□□□□ 0.5
ABCD4-204ENST00000466822 SBF1O95248 1867 aa18.2■□□□□ 0.5
ABCD4-204ENST00000466822 UTYO14607 1347 aa18.2■□□□□ 0.5
ABCD4-204ENST00000466822 LARGE2Q8N3Y3 721 aa18.19■□□□□ 0.5
ABCD4-204ENST00000466822 JARID2Q92833 1246 aaPredicted RBP18.19■□□□□ 0.5
ABCD4-204ENST00000466822 EYA3Q99504 573 aa18.19■□□□□ 0.5
ABCD4-204ENST00000466822 BSDC1Q9NW68 430 aaPredicted RBP18.19■□□□□ 0.5
ABCD4-204ENST00000466822 FZD9O00144 591 aa18.18■□□□□ 0.5
ABCD4-204ENST00000466822 VEGFAP15692 232 aaPredicted RBP18.18■□□□□ 0.5
ABCD4-204ENST00000466822 IGHMBP2P38935 993 aaKnown RBP18.18■□□□□ 0.5
ABCD4-204ENST00000466822 BCL2L13Q9BXK5 485 aa18.18■□□□□ 0.5
ABCD4-204ENST00000466822 SEC31BQ9NQW1 1179 aa18.18■□□□□ 0.5
ABCD4-204ENST00000466822 NOB1Q9ULX3 412 aaKnown RBP18.18■□□□□ 0.5
ABCD4-204ENST00000466822 EIF6P56537 245 aaKnown RBP18.17■□□□□ 0.5
ABCD4-204ENST00000466822 KIAA2012Q0VF49 1180 aa18.17■□□□□ 0.5
ABCD4-204ENST00000466822 ZNF526Q8TF50 670 aaPredicted RBP18.17■□□□□ 0.5
ABCD4-204ENST00000466822 NSFL1CQ9UNZ2 370 aaKnown RBP18.17■□□□□ 0.5
ABCD4-204ENST00000466822 DDX60Q8IY21 1712 aaKnown RBP18.17■□□□□ 0.5
ABCD4-204ENST00000466822 ANKRD18BA2A2Z9 1011 aa18.16■□□□□ 0.5
ABCD4-204ENST00000466822 PPIP5K2O43314 1243 aa18.16■□□□□ 0.5
ABCD4-204ENST00000466822 IFIT5Q13325 482 aaKnown RBP18.16■□□□□ 0.5
ABCD4-204ENST00000466822 NIM1KQ8IY84 436 aa18.16■□□□□ 0.5
ABCD4-204ENST00000466822 GREM2Q9H772 168 aa18.16■□□□□ 0.5
ABCD4-204ENST00000466822 LAMB2P55268 1798 aa18.16■□□□□ 0.5
ABCD4-204ENST00000466822 IQCA1LA6NCM1 817 aa18.15■□□□□ 0.5
ABCD4-204ENST00000466822 TOMM70O94826 608 aa18.15■□□□□ 0.5
ABCD4-204ENST00000466822 ITGA6P23229 1130 aa18.15■□□□□ 0.5
ABCD4-204ENST00000466822 FOXO4P98177 505 aa18.15■□□□□ 0.5
ABCD4-204ENST00000466822 CCDC57Q2TAC2 916 aa18.15■□□□□ 0.5
ABCD4-204ENST00000466822 C16orf71Q8IYS4 520 aaPredicted RBP18.15■□□□□ 0.5
ABCD4-204ENST00000466822 MPHOSPH8Q99549 860 aa18.15■□□□□ 0.5
ABCD4-204ENST00000466822 ANKRD2Q9GZV1 360 aa18.15■□□□□ 0.5
ABCD4-204ENST00000466822 KIF3CO14782 793 aa18.14■□□□□ 0.49
ABCD4-204ENST00000466822 ATP2B4P23634 1241 aa18.14■□□□□ 0.49
ABCD4-204ENST00000466822 WASHC4Q2M389 1173 aa18.14■□□□□ 0.49
ABCD4-204ENST00000466822 GPC2Q8N158 579 aa18.14■□□□□ 0.49
ABCD4-204ENST00000466822 L3MBTL3Q96JM7 780 aaPredicted RBP18.14■□□□□ 0.49
ABCD4-204ENST00000466822 ZC3H12CQ9C0D7 883 aaKnown RBP18.14■□□□□ 0.49
ABCD4-204ENST00000466822 ANKIB1Q9P2G1 1089 aa18.14■□□□□ 0.49
ABCD4-204ENST00000466822 ZNRF3Q9ULT6 936 aa18.14■□□□□ 0.49
ABCD4-204ENST00000466822 XDHP47989 1333 aa18.14■□□□□ 0.49
ABCD4-204ENST00000466822 C6orf229H3BNL8 230 aa18.13■□□□□ 0.49
ABCD4-204ENST00000466822 C1QTNF8P60827 252 aa18.13■□□□□ 0.49
ABCD4-204ENST00000466822 GPSM2P81274 684 aa18.13■□□□□ 0.49
ABCD4-204ENST00000466822 LMBR1LQ6UX01 489 aa18.13■□□□□ 0.49
ABCD4-204ENST00000466822 CCDC85AQ96PX6 553 aaPredicted RBP18.13■□□□□ 0.49
ABCD4-204ENST00000466822 USP44Q9H0E7 712 aa18.13■□□□□ 0.49
ABCD4-204ENST00000466822 RRAGCQ9HB90 399 aa18.13■□□□□ 0.49
ABCD4-204ENST00000466822 GGA1Q9UJY5 639 aa18.13■□□□□ 0.49
ABCD4-204ENST00000466822 LEMD3Q9Y2U8 911 aa18.13■□□□□ 0.49
ABCD4-204ENST00000466822 DICER1Q9UPY3 1922 aaKnown RBP18.12■□□□□ 0.49
ABCD4-204ENST00000466822 TNIP1Q15025 636 aa18.12■□□□□ 0.49
ABCD4-204ENST00000466822 AOC3Q16853 763 aa18.12■□□□□ 0.49
ABCD4-204ENST00000466822 INTS3Q68E01 1043 aaKnown RBP18.12■□□□□ 0.49
ABCD4-204ENST00000466822 ATF7IPQ6VMQ6 1270 aa18.12■□□□□ 0.49
ABCD4-204ENST00000466822 TBC1D16Q8TBP0 767 aa18.12■□□□□ 0.49
ABCD4-204ENST00000466822 RBM46Q8TBY0 533 aaKnown RBP18.12■□□□□ 0.49
ABCD4-204ENST00000466822 NMRK2Q9NPI5 230 aa18.12■□□□□ 0.49
ABCD4-204ENST00000466822 MINPP1Q9UNW1 487 aa18.12■□□□□ 0.49
ABCD4-204ENST00000466822 CACNA1SQ13698 1873 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms