RNA–Protein interactions for RNA: ENST00000466635.1

SYP-203, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 513 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-203ENST00000466635 SUCLG2Q96I99 432 aa16.88■□□□□ 0.29
SYP-203ENST00000466635 ZBTB7BO15156 539 aaPredicted RBP16.87■□□□□ 0.29
SYP-203ENST00000466635 GNAI2P04899 355 aa16.87■□□□□ 0.29
SYP-203ENST00000466635 KCNA3P22001 575 aa16.87■□□□□ 0.29
SYP-203ENST00000466635 FOXO4P98177 505 aa16.87■□□□□ 0.29
SYP-203ENST00000466635 TTLL6Q8N841 843 aa16.87■□□□□ 0.29
SYP-203ENST00000466635 TTLL11Q8NHH1 800 aa16.87■□□□□ 0.29
SYP-203ENST00000466635 CRAMP1Q96RY5 1269 aa16.87■□□□□ 0.29
SYP-203ENST00000466635 CSF1RP07333 972 aa16.86■□□□□ 0.29
SYP-203ENST00000466635 DALRD3Q5D0E6 543 aaKnown RBP16.86■□□□□ 0.29
SYP-203ENST00000466635 LMBR1LQ6UX01 489 aa16.86■□□□□ 0.29
SYP-203ENST00000466635 BICC1Q9H694 974 aaKnown RBP16.86■□□□□ 0.29
SYP-203ENST00000466635 CHMP3Q9Y3E7 222 aa16.86■□□□□ 0.29
SYP-203ENST00000466635 CCDC85AQ96PX6 553 aaPredicted RBP16.85■□□□□ 0.29
SYP-203ENST00000466635 LRRFIP2Q9Y608 721 aaKnown RBP16.85■□□□□ 0.29
SYP-203ENST00000466635 KIF13BQ9NQT8 1826 aa16.84■□□□□ 0.29
SYP-203ENST00000466635 BBOX1O75936 387 aa16.84■□□□□ 0.29
SYP-203ENST00000466635 GRAPQ13588 217 aa16.84■□□□□ 0.29
SYP-203ENST00000466635 CCDC57Q2TAC2 916 aa16.84■□□□□ 0.29
SYP-203ENST00000466635 EPHA10Q5JZY3 1008 aa16.84■□□□□ 0.29
SYP-203ENST00000466635 GRAPLQ8TC17 118 aaPredicted RBP16.84■□□□□ 0.29
SYP-203ENST00000466635 KAZALD1Q96I82 304 aa16.84■□□□□ 0.29
SYP-203ENST00000466635 CDC5LQ99459 802 aaKnown RBP16.84■□□□□ 0.29
SYP-203ENST00000466635 TMX4Q9H1E5 349 aaPredicted RBP16.84■□□□□ 0.29
SYP-203ENST00000466635 GREM2Q9H772 168 aa16.84■□□□□ 0.29
SYP-203ENST00000466635 ANKRD18BA2A2Z9 1011 aa16.83■□□□□ 0.28
SYP-203ENST00000466635 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
SYP-203ENST00000466635 IFIT5Q13325 482 aaKnown RBP16.83■□□□□ 0.28
SYP-203ENST00000466635 RABL6Q3YEC7 729 aaPredicted RBP16.83■□□□□ 0.28
SYP-203ENST00000466635 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.28
SYP-203ENST00000466635 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
SYP-203ENST00000466635 BCS1LQ9Y276 419 aa16.83■□□□□ 0.28
SYP-203ENST00000466635 TNRC6CQ9HCJ0 1690 aaKnown RBP16.82■□□□□ 0.28
SYP-203ENST00000466635 ITGA6P23229 1130 aa16.82■□□□□ 0.28
SYP-203ENST00000466635 FAM161AQ3B820 660 aa16.82■□□□□ 0.28
SYP-203ENST00000466635 PRPF40BQ6NWY9 871 aaKnown RBP16.82■□□□□ 0.28
SYP-203ENST00000466635 TMC4Q7Z404 712 aa16.82■□□□□ 0.28
SYP-203ENST00000466635 ANKRD18AQ8IVF6 992 aa16.82■□□□□ 0.28
SYP-203ENST00000466635 ANKRD44Q8N8A2 993 aa16.82■□□□□ 0.28
SYP-203ENST00000466635 SEC31BQ9NQW1 1179 aa16.82■□□□□ 0.28
SYP-203ENST00000466635 WWC3Q9ULE0 1092 aa16.82■□□□□ 0.28
SYP-203ENST00000466635 ANKRD31Q8N7Z5 1873 aa16.82■□□□□ 0.28
SYP-203ENST00000466635 N4BP2Q86UW6 1770 aaPredicted RBP16.82■□□□□ 0.28
SYP-203ENST00000466635 IGHMBP2P38935 993 aaKnown RBP16.81■□□□□ 0.28
SYP-203ENST00000466635 RPS8P62241 208 aaKnown RBP16.81■□□□□ 0.28
SYP-203ENST00000466635 GPR162Q16538 588 aa16.81■□□□□ 0.28
SYP-203ENST00000466635 TAF7LQ5H9L4 462 aa16.81■□□□□ 0.28
SYP-203ENST00000466635 ZBTB40Q9NUA8 1239 aa16.81■□□□□ 0.28
SYP-203ENST00000466635 DDX60Q8IY21 1712 aaKnown RBP16.81■□□□□ 0.28
SYP-203ENST00000466635 PPEF1O14829 653 aaPredicted RBP16.8■□□□□ 0.28
SYP-203ENST00000466635 SOGA3Q5TF21 947 aa16.8■□□□□ 0.28
SYP-203ENST00000466635 CELF1Q92879 486 aaKnown RBP16.8■□□□□ 0.28
SYP-203ENST00000466635 CRBNQ96SW2 442 aa16.8■□□□□ 0.28
SYP-203ENST00000466635 LAMB2P55268 1798 aa16.79■□□□□ 0.28
SYP-203ENST00000466635 CC2D2BQ6DHV5 1058 aa16.79■□□□□ 0.28
SYP-203ENST00000466635 MPHOSPH8Q99549 860 aa16.79■□□□□ 0.28
SYP-203ENST00000466635 C1orf115Q9H7X2 142 aa16.79■□□□□ 0.28
SYP-203ENST00000466635 ZNF219Q9P2Y4 722 aaPredicted RBP16.79■□□□□ 0.28
SYP-203ENST00000466635 SRGAP3O43295 1099 aa16.78■□□□□ 0.28
SYP-203ENST00000466635 C21orf2O43822 256 aa16.78■□□□□ 0.28
SYP-203ENST00000466635 MTX1Q13505 466 aa16.78■□□□□ 0.28
SYP-203ENST00000466635 SP8Q8IXZ3 490 aa16.78■□□□□ 0.28
SYP-203ENST00000466635 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
SYP-203ENST00000466635 COL11A2P13942 1736 aaPredicted RBP16.77■□□□□ 0.28
SYP-203ENST00000466635 KIAA1551Q9HCM1 1747 aa16.77■□□□□ 0.28
SYP-203ENST00000466635 GRIN3BO60391 1043 aa16.77■□□□□ 0.28
SYP-203ENST00000466635 AAMPQ13685 434 aa16.77■□□□□ 0.28
SYP-203ENST00000466635 GRIPAP1Q4V328 841 aa16.77■□□□□ 0.28
SYP-203ENST00000466635 C7orf43Q8WVR3 580 aa16.77■□□□□ 0.28
SYP-203ENST00000466635 BSDC1Q9NW68 430 aaPredicted RBP16.77■□□□□ 0.28
SYP-203ENST00000466635 ATP8B2P98198 1209 aa16.76■□□□□ 0.27
SYP-203ENST00000466635 CCDC93Q567U6 631 aa16.76■□□□□ 0.27
SYP-203ENST00000466635 LDHAL6AQ6ZMR3 332 aa16.76■□□□□ 0.27
SYP-203ENST00000466635 RPAP2Q8IXW5 612 aaPredicted RBP16.76■□□□□ 0.27
SYP-203ENST00000466635 YBX3P16989 372 aaKnown RBP eCLIP16.75■□□□□ 0.27
SYP-203ENST00000466635 RTKN2Q8IZC4 609 aa16.75■□□□□ 0.27
SYP-203ENST00000466635 ZNF594Q96JF6 807 aaPredicted RBP16.75■□□□□ 0.27
SYP-203ENST00000466635 CNNM1Q9NRU3 951 aa16.75■□□□□ 0.27
SYP-203ENST00000466635 HMMRO75330 724 aa16.74■□□□□ 0.27
SYP-203ENST00000466635 CEP85Q6P2H3 762 aa16.74■□□□□ 0.27
SYP-203ENST00000466635 ARHGAP27Q6ZUM4 889 aa16.74■□□□□ 0.27
SYP-203ENST00000466635 DLEC1Q9Y238 1755 aa16.74■□□□□ 0.27
SYP-203ENST00000466635 PNMA6EA0A0J9YXQ4 647 aa16.73■□□□□ 0.27
SYP-203ENST00000466635 YY1P25490 414 aa16.73■□□□□ 0.27
SYP-203ENST00000466635 RFX5P48382 616 aaPredicted RBP16.73■□□□□ 0.27
SYP-203ENST00000466635 IRX6P78412 446 aaPredicted RBP16.73■□□□□ 0.27
SYP-203ENST00000466635 ANKRD2Q9GZV1 360 aa16.73■□□□□ 0.27
SYP-203ENST00000466635 ANKIB1Q9P2G1 1089 aa16.73■□□□□ 0.27
SYP-203ENST00000466635 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
SYP-203ENST00000466635 MINPP1Q9UNW1 487 aa16.73■□□□□ 0.27
SYP-203ENST00000466635 NEFLP07196 543 aa16.72■□□□□ 0.27
SYP-203ENST00000466635 PTPN12Q05209 780 aaKnown RBP16.72■□□□□ 0.27
SYP-203ENST00000466635 POLA2Q14181 598 aa16.72■□□□□ 0.27
SYP-203ENST00000466635 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
SYP-203ENST00000466635 DPP8Q6V1X1 898 aaPredicted RBP16.72■□□□□ 0.27
SYP-203ENST00000466635 MPNDQ8N594 471 aa16.72■□□□□ 0.27
SYP-203ENST00000466635 EXOC6Q8TAG9 804 aa16.72■□□□□ 0.27
SYP-203ENST00000466635 SSH3Q8TE77 659 aa16.72■□□□□ 0.27
SYP-203ENST00000466635 COPRSQ9NQ92 184 aa16.72■□□□□ 0.27
SYP-203ENST00000466635 NSFL1CQ9UNZ2 370 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms