RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 ZNF34Q8IZ26 560 aa18.73■□□□□ 0.59
SNED1-208ENST00000466618 K7ELQ4 463 aaPredicted RBP18.72■□□□□ 0.59
SNED1-208ENST00000466618 NEXNQ0ZGT2 675 aa18.72■□□□□ 0.59
SNED1-208ENST00000466618 ZNF652Q9Y2D9 606 aa18.72■□□□□ 0.59
SNED1-208ENST00000466618 QSER1Q2KHR3 1735 aa18.72■□□□□ 0.59
SNED1-208ENST00000466618 NEURL1BA8MQ27 555 aa18.72■□□□□ 0.59
SNED1-208ENST00000466618 ATP5J2-PTCD1G3V325 749 aa18.72■□□□□ 0.59
SNED1-208ENST00000466618 GOLGA6L22H0YM25 854 aa18.72■□□□□ 0.59
SNED1-208ENST00000466618 ALDH1L1O75891 902 aa18.72■□□□□ 0.59
SNED1-208ENST00000466618 CWF19L2Q2TBE0 894 aaKnown RBP18.72■□□□□ 0.59
SNED1-208ENST00000466618 SRCIN1Q9C0H9 1055 aa18.72■□□□□ 0.59
SNED1-208ENST00000466618 RBSNQ9H1K0 784 aa18.71■□□□□ 0.59
SNED1-208ENST00000466618 UBN2Q6ZU65 1347 aa18.71■□□□□ 0.58
SNED1-208ENST00000466618 TBC1D9BQ66K14 1250 aa18.7■□□□□ 0.58
SNED1-208ENST00000466618 PDGFDQ9GZP0 370 aaPredicted RBP18.7■□□□□ 0.58
SNED1-208ENST00000466618 NLRP10Q86W26 655 aa18.69■□□□□ 0.58
SNED1-208ENST00000466618 CCDC191Q8NCU4 936 aa18.69■□□□□ 0.58
SNED1-208ENST00000466618 ZKSCAN5Q9Y2L8 839 aa18.69■□□□□ 0.58
SNED1-208ENST00000466618 ZBTB7BO15156 539 aaPredicted RBP18.69■□□□□ 0.58
SNED1-208ENST00000466618 GCKRQ14397 625 aa18.69■□□□□ 0.58
SNED1-208ENST00000466618 ZSCAN23Q3MJ62 389 aa18.69■□□□□ 0.58
SNED1-208ENST00000466618 ITPRIPQ8IWB1 547 aa18.69■□□□□ 0.58
SNED1-208ENST00000466618 ARID3AQ99856 593 aa18.69■□□□□ 0.58
SNED1-208ENST00000466618 GPTP24298 496 aa18.68■□□□□ 0.58
SNED1-208ENST00000466618 USP44Q9H0E7 712 aa18.68■□□□□ 0.58
SNED1-208ENST00000466618 PRDM10Q9NQV6 1147 aa18.68■□□□□ 0.58
SNED1-208ENST00000466618 TM4SF1P30408 202 aa18.68■□□□□ 0.58
SNED1-208ENST00000466618 NUCB1Q02818 461 aa18.68■□□□□ 0.58
SNED1-208ENST00000466618 DDX19BQ9UMR2 479 aa18.68■□□□□ 0.58
SNED1-208ENST00000466618 NIP7Q9Y221 180 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNED1-208ENST00000466618 N4BP2Q86UW6 1770 aaPredicted RBP18.67■□□□□ 0.58
SNED1-208ENST00000466618 UTYO14607 1347 aa18.67■□□□□ 0.58
SNED1-208ENST00000466618 PARP10Q53GL7 1025 aa18.67■□□□□ 0.58
SNED1-208ENST00000466618 NLGN1Q8N2Q7 840 aa18.67■□□□□ 0.58
SNED1-208ENST00000466618 CWC25Q9NXE8 425 aaPredicted RBP18.67■□□□□ 0.58
SNED1-208ENST00000466618 ZHX1Q9UKY1 873 aaPredicted RBP18.67■□□□□ 0.58
SNED1-208ENST00000466618 NUP98P52948 1817 aa18.67■□□□□ 0.58
SNED1-208ENST00000466618 NFIXQ14938 502 aa18.66■□□□□ 0.58
SNED1-208ENST00000466618 CSPP1Q1MSJ5 1256 aa18.66■□□□□ 0.58
SNED1-208ENST00000466618 CAVIN1Q6NZI2 390 aaKnown RBP18.66■□□□□ 0.58
SNED1-208ENST00000466618 SASS6Q6UVJ0 657 aa18.66■□□□□ 0.58
SNED1-208ENST00000466618 SOCS7O14512 581 aa18.66■□□□□ 0.58
SNED1-208ENST00000466618 R3HDM1Q15032 1099 aaKnown RBP18.66■□□□□ 0.58
SNED1-208ENST00000466618 UTP14CQ5TAP6 766 aaKnown RBP18.66■□□□□ 0.58
SNED1-208ENST00000466618 SUSD4Q5VX71 490 aa18.66■□□□□ 0.58
SNED1-208ENST00000466618 SLC16A10Q8TF71 515 aa18.66■□□□□ 0.58
SNED1-208ENST00000466618 AK9Q5TCS8 1911 aa18.66■□□□□ 0.58
SNED1-208ENST00000466618 DMTNQ08495 405 aa18.65■□□□□ 0.58
SNED1-208ENST00000466618 MEIS3Q99687 375 aa18.65■□□□□ 0.58
SNED1-208ENST00000466618 H7C1W4 665 aa18.65■□□□□ 0.58
SNED1-208ENST00000466618 GRM8O00222 908 aa18.65■□□□□ 0.58
SNED1-208ENST00000466618 MCM5P33992 734 aa18.65■□□□□ 0.58
SNED1-208ENST00000466618 CASP7P55210 303 aa18.65■□□□□ 0.58
SNED1-208ENST00000466618 SETDB2Q96T68 719 aa18.65■□□□□ 0.58
SNED1-208ENST00000466618 LMBRD1Q9NUN5 540 aa18.65■□□□□ 0.58
SNED1-208ENST00000466618 NBPF7P0C2Y1 421 aaPredicted RBP18.64■□□□□ 0.57
SNED1-208ENST00000466618 BMP2KLQ5H9B9 411 aa18.64■□□□□ 0.57
SNED1-208ENST00000466618 BICDL1Q6ZP65 573 aa18.64■□□□□ 0.57
SNED1-208ENST00000466618 LNPKQ9C0E8 428 aa18.64■□□□□ 0.57
SNED1-208ENST00000466618 ZBTB40Q9NUA8 1239 aa18.64■□□□□ 0.57
SNED1-208ENST00000466618 ANKRD36CQ5JPF3 1778 aa18.64■□□□□ 0.57
SNED1-208ENST00000466618 NTSR2O95665 410 aa18.64■□□□□ 0.57
SNED1-208ENST00000466618 MCTP1Q6DN14 999 aa18.64■□□□□ 0.57
SNED1-208ENST00000466618 CCDC94Q9BW85 323 aaPredicted RBP18.64■□□□□ 0.57
SNED1-208ENST00000466618 PCCAP05165 728 aaPredicted RBP18.63■□□□□ 0.57
SNED1-208ENST00000466618 ZBTB38Q8NAP3 1195 aaPredicted RBP18.63■□□□□ 0.57
SNED1-208ENST00000466618 CYP2E1P05181 493 aaPredicted RBP18.62■□□□□ 0.57
SNED1-208ENST00000466618 ZSCAN20P17040 1043 aaPredicted RBP18.62■□□□□ 0.57
SNED1-208ENST00000466618 DDR1Q08345 913 aa18.62■□□□□ 0.57
SNED1-208ENST00000466618 CARMIL3Q8ND23 1372 aa18.62■□□□□ 0.57
SNED1-208ENST00000466618 POLRMTO00411 1230 aaKnown RBP18.62■□□□□ 0.57
SNED1-208ENST00000466618 PPP1R42Q7Z4L9 355 aa18.62■□□□□ 0.57
SNED1-208ENST00000466618 CHD1LQ86WJ1 897 aa18.62■□□□□ 0.57
SNED1-208ENST00000466618 UTP14AQ9BVJ6 771 aaKnown RBP18.62■□□□□ 0.57
SNED1-208ENST00000466618 C9orf78Q9NZ63 289 aaPredicted RBP18.62■□□□□ 0.57
SNED1-208ENST00000466618 CASZ1Q86V15 1759 aa18.62■□□□□ 0.57
SNED1-208ENST00000466618 GNAI3P08754 354 aa18.61■□□□□ 0.57
SNED1-208ENST00000466618 MSL1Q68DK7 614 aa18.61■□□□□ 0.57
SNED1-208ENST00000466618 TRMT112Q9UI30 125 aaKnown RBP18.61■□□□□ 0.57
SNED1-208ENST00000466618 COL24A1Q17RW2 1714 aa18.61■□□□□ 0.57
SNED1-208ENST00000466618 PSDA5PKW4 1024 aaPredicted RBP18.61■□□□□ 0.57
SNED1-208ENST00000466618 FAM89AQ96GI7 184 aa18.61■□□□□ 0.57
SNED1-208ENST00000466618 CHMP4BQ9H444 224 aaKnown RBP18.61■□□□□ 0.57
SNED1-208ENST00000466618 NCLP19338 710 aaKnown RBP18.6■□□□□ 0.57
SNED1-208ENST00000466618 TBC1D9Q6ZT07 1266 aa18.6■□□□□ 0.57
SNED1-208ENST00000466618 UBE3BQ7Z3V4 1068 aa18.6■□□□□ 0.57
SNED1-208ENST00000466618 SYNE4Q8N205 404 aa18.6■□□□□ 0.57
SNED1-208ENST00000466618 JARID2Q92833 1246 aaPredicted RBP18.6■□□□□ 0.57
SNED1-208ENST00000466618 KAZALD1Q96I82 304 aa18.6■□□□□ 0.57
SNED1-208ENST00000466618 CDHR2Q9BYE9 1310 aa18.6■□□□□ 0.57
SNED1-208ENST00000466618 MMP10P09238 476 aa18.59■□□□□ 0.57
SNED1-208ENST00000466618 FGD1P98174 961 aa18.59■□□□□ 0.57
SNED1-208ENST00000466618 SERPINB2P05120 415 aa18.59■□□□□ 0.57
SNED1-208ENST00000466618 UBTFL1P0CB47 393 aaPredicted RBP18.59■□□□□ 0.57
SNED1-208ENST00000466618 NBPF5PQ86XG9 351 aaPredicted RBP18.59■□□□□ 0.57
SNED1-208ENST00000466618 NYXQ9GZU5 481 aa18.59■□□□□ 0.57
SNED1-208ENST00000466618 SH3TC1Q8TE82 1336 aa18.59■□□□□ 0.57
SNED1-208ENST00000466618 FAM177BA6PVY3 158 aa18.58■□□□□ 0.57
SNED1-208ENST00000466618 TPTE2Q6XPS3 522 aa18.58■□□□□ 0.57
SNED1-208ENST00000466618 GPT2Q8TD30 523 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms