RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 BRCA1P38398 1863 aaKnown RBP18.22■□□□□ 0.51
DNMT3A-208ENST00000466601 LAMB2P55268 1798 aa18.22■□□□□ 0.51
DNMT3A-208ENST00000466601 MS4A1P11836 297 aa18.21■□□□□ 0.51
DNMT3A-208ENST00000466601 CCDC152Q4G0S7 254 aa18.21■□□□□ 0.51
DNMT3A-208ENST00000466601 PRPF40BQ6NWY9 871 aaKnown RBP18.21■□□□□ 0.51
DNMT3A-208ENST00000466601 TTLL11Q8NHH1 800 aa18.21■□□□□ 0.51
DNMT3A-208ENST00000466601 RLBP1P12271 317 aa18.2■□□□□ 0.5
DNMT3A-208ENST00000466601 SUCLG2Q96I99 432 aa18.2■□□□□ 0.5
DNMT3A-208ENST00000466601 CCDC85AQ96PX6 553 aaPredicted RBP18.2■□□□□ 0.5
DNMT3A-208ENST00000466601 GRIN3BO60391 1043 aa18.19■□□□□ 0.5
DNMT3A-208ENST00000466601 CSF1RP07333 972 aa18.19■□□□□ 0.5
DNMT3A-208ENST00000466601 FOXO4P98177 505 aa18.19■□□□□ 0.5
DNMT3A-208ENST00000466601 GRAPQ13588 217 aa18.19■□□□□ 0.5
DNMT3A-208ENST00000466601 GRAPLQ8TC17 118 aaPredicted RBP18.19■□□□□ 0.5
DNMT3A-208ENST00000466601 PANK1Q8TE04 598 aa18.19■□□□□ 0.5
DNMT3A-208ENST00000466601 ZNF219Q9P2Y4 722 aaPredicted RBP18.19■□□□□ 0.5
DNMT3A-208ENST00000466601 C21orf2O43822 256 aa18.18■□□□□ 0.5
DNMT3A-208ENST00000466601 UBTFL1P0CB47 393 aaPredicted RBP18.18■□□□□ 0.5
DNMT3A-208ENST00000466601 EPHA10Q5JZY3 1008 aa18.18■□□□□ 0.5
DNMT3A-208ENST00000466601 KAZALD1Q96I82 304 aa18.18■□□□□ 0.5
DNMT3A-208ENST00000466601 MEIS3Q99687 375 aa18.18■□□□□ 0.5
DNMT3A-208ENST00000466601 SEC31BQ9NQW1 1179 aa18.18■□□□□ 0.5
DNMT3A-208ENST00000466601 SLX4Q8IY92 1834 aa18.17■□□□□ 0.5
DNMT3A-208ENST00000466601 BBOX1O75936 387 aa18.17■□□□□ 0.5
DNMT3A-208ENST00000466601 LMBR1LQ6UX01 489 aa18.17■□□□□ 0.5
DNMT3A-208ENST00000466601 ITPRIPQ8IWB1 547 aa18.17■□□□□ 0.5
DNMT3A-208ENST00000466601 C7orf43Q8WVR3 580 aa18.17■□□□□ 0.5
DNMT3A-208ENST00000466601 GREM2Q9H772 168 aa18.17■□□□□ 0.5
DNMT3A-208ENST00000466601 HDAC5Q9UQL6 1122 aa18.17■□□□□ 0.5
DNMT3A-208ENST00000466601 PPEF1O14829 653 aaPredicted RBP18.16■□□□□ 0.5
DNMT3A-208ENST00000466601 GNAI3P08754 354 aa18.16■□□□□ 0.5
DNMT3A-208ENST00000466601 CELF1Q92879 486 aaKnown RBP18.16■□□□□ 0.5
DNMT3A-208ENST00000466601 BICC1Q9H694 974 aaKnown RBP18.16■□□□□ 0.5
DNMT3A-208ENST00000466601 RTL9Q8NET4 1388 aa18.16■□□□□ 0.5
DNMT3A-208ENST00000466601 ARFGEF1Q9Y6D6 1849 aa18.15■□□□□ 0.5
DNMT3A-208ENST00000466601 RPS8P62241 208 aaKnown RBP18.15■□□□□ 0.5
DNMT3A-208ENST00000466601 PDE3AQ14432 1141 aa18.15■□□□□ 0.5
DNMT3A-208ENST00000466601 FAM161AQ3B820 660 aa18.15■□□□□ 0.5
DNMT3A-208ENST00000466601 SOGA3Q5TF21 947 aa18.15■□□□□ 0.5
DNMT3A-208ENST00000466601 ARHGAP27Q6ZUM4 889 aa18.15■□□□□ 0.5
DNMT3A-208ENST00000466601 CHMP3Q9Y3E7 222 aa18.15■□□□□ 0.5
DNMT3A-208ENST00000466601 CACNA1SQ13698 1873 aa18.15■□□□□ 0.5
DNMT3A-208ENST00000466601 MYH3P11055 1940 aa18.15■□□□□ 0.5
DNMT3A-208ENST00000466601 ITGA6P23229 1130 aa18.14■□□□□ 0.49
DNMT3A-208ENST00000466601 RRP1P56182 461 aaKnown RBP18.14■□□□□ 0.49
DNMT3A-208ENST00000466601 RABL6Q3YEC7 729 aaPredicted RBP18.14■□□□□ 0.49
DNMT3A-208ENST00000466601 ANKRD18AQ8IVF6 992 aa18.14■□□□□ 0.49
DNMT3A-208ENST00000466601 ANKRD44Q8N8A2 993 aa18.14■□□□□ 0.49
DNMT3A-208ENST00000466601 CDC5LQ99459 802 aaKnown RBP18.14■□□□□ 0.49
DNMT3A-208ENST00000466601 ANKRD18BA2A2Z9 1011 aa18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 ZBTB7BO15156 539 aaPredicted RBP18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 IFIT5Q13325 482 aaKnown RBP18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 MVPQ14764 893 aaKnown RBP18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 CCDC93Q567U6 631 aa18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 C20orf194Q5TEA3 1177 aa18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 CC2D2BQ6DHV5 1058 aa18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 OLFM4Q6UX06 510 aa18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 TMC4Q7Z404 712 aa18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 TMX4Q9H1E5 349 aaPredicted RBP18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 COG6Q9Y2V7 657 aa18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 ATP6V0A2Q9Y487 856 aa18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 LRRFIP2Q9Y608 721 aaKnown RBP18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 TAF1P21675 1872 aa18.13■□□□□ 0.49
DNMT3A-208ENST00000466601 CCDC57Q2TAC2 916 aa18.12■□□□□ 0.49
DNMT3A-208ENST00000466601 SP8Q8IXZ3 490 aa18.12■□□□□ 0.49
DNMT3A-208ENST00000466601 GNAI2P04899 355 aa18.11■□□□□ 0.49
DNMT3A-208ENST00000466601 IGHMBP2P38935 993 aaKnown RBP18.11■□□□□ 0.49
DNMT3A-208ENST00000466601 SLC51AQ86UW1 340 aa18.11■□□□□ 0.49
DNMT3A-208ENST00000466601 COL4A1P02462 1669 aa18.11■□□□□ 0.49
DNMT3A-208ENST00000466601 GRIPAP1Q4V328 841 aa18.1■□□□□ 0.49
DNMT3A-208ENST00000466601 RTKN2Q8IZC4 609 aa18.1■□□□□ 0.49
DNMT3A-208ENST00000466601 DDX19BQ9UMR2 479 aa18.1■□□□□ 0.49
DNMT3A-208ENST00000466601 TAF7LQ5H9L4 462 aa18.09■□□□□ 0.49
DNMT3A-208ENST00000466601 MPHOSPH8Q99549 860 aa18.09■□□□□ 0.49
DNMT3A-208ENST00000466601 BSDC1Q9NW68 430 aaPredicted RBP18.09■□□□□ 0.49
DNMT3A-208ENST00000466601 NFKBIEO00221 500 aa18.08■□□□□ 0.48
DNMT3A-208ENST00000466601 RASSF7Q02833 373 aa18.08■□□□□ 0.48
DNMT3A-208ENST00000466601 SUPT16HQ9Y5B9 1047 aaKnown RBP18.08■□□□□ 0.48
DNMT3A-208ENST00000466601 FKBP4Q02790 459 aaKnown RBP eCLIP18.07■□□□□ 0.48
DNMT3A-208ENST00000466601 MPNDQ8N594 471 aa18.07■□□□□ 0.48
DNMT3A-208ENST00000466601 ZNF594Q96JF6 807 aaPredicted RBP18.07■□□□□ 0.48
DNMT3A-208ENST00000466601 TAOK3Q9H2K8 898 aa18.07■□□□□ 0.48
DNMT3A-208ENST00000466601 CHMP4BQ9H444 224 aaKnown RBP18.07■□□□□ 0.48
DNMT3A-208ENST00000466601 SNED1Q8TER0 1413 aa18.06■□□□□ 0.48
DNMT3A-208ENST00000466601 LTBP3Q9NS15 1303 aa18.06■□□□□ 0.48
DNMT3A-208ENST00000466601 DPP8Q6V1X1 898 aaPredicted RBP18.06■□□□□ 0.48
DNMT3A-208ENST00000466601 C1orf115Q9H7X2 142 aa18.06■□□□□ 0.48
DNMT3A-208ENST00000466601 MINPP1Q9UNW1 487 aa18.06■□□□□ 0.48
DNMT3A-208ENST00000466601 FER1L6Q2WGJ9 1857 aa18.05■□□□□ 0.48
DNMT3A-208ENST00000466601 GOLGB1Q14789 3259 aaKnown RBP18.05■□□□□ 0.48
DNMT3A-208ENST00000466601 RFX5P48382 616 aaPredicted RBP18.05■□□□□ 0.48
DNMT3A-208ENST00000466601 GPSM2P81274 684 aa18.05■□□□□ 0.48
DNMT3A-208ENST00000466601 MTX1Q13505 466 aa18.05■□□□□ 0.48
DNMT3A-208ENST00000466601 LDHAL6AQ6ZMR3 332 aa18.05■□□□□ 0.48
DNMT3A-208ENST00000466601 PSMD1Q99460 953 aa18.05■□□□□ 0.48
DNMT3A-208ENST00000466601 ZBTB40Q9NUA8 1239 aa18.05■□□□□ 0.48
DNMT3A-208ENST00000466601 NSFL1CQ9UNZ2 370 aaKnown RBP18.05■□□□□ 0.48
DNMT3A-208ENST00000466601 SRGAP3O43295 1099 aa18.04■□□□□ 0.48
DNMT3A-208ENST00000466601 KLHDC4Q8TBB5 520 aa18.04■□□□□ 0.48
DNMT3A-208ENST00000466601 CNNM1Q9NRU3 951 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms