RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 IFT57Q9NWB7 429 aa24.86■■□□□ 1.57
COL9A3-206ENST00000466532 SCNN1DP51172 638 aa24.85■■□□□ 1.57
COL9A3-206ENST00000466532 GNAI1P63096 354 aa24.85■■□□□ 1.57
COL9A3-206ENST00000466532 CNTROBQ8N137 903 aa24.85■■□□□ 1.57
COL9A3-206ENST00000466532 MPNDQ8N594 471 aa24.85■■□□□ 1.57
COL9A3-206ENST00000466532 RTFDC1Q9BY42 306 aaPredicted RBP24.85■■□□□ 1.57
COL9A3-206ENST00000466532 CNTNAP1P78357 1384 aa24.84■■□□□ 1.57
COL9A3-206ENST00000466532 TMEM88BA6NKF7 163 aa24.84■■□□□ 1.57
COL9A3-206ENST00000466532 FAM89AQ96GI7 184 aa24.84■■□□□ 1.57
COL9A3-206ENST00000466532 DUOX1Q9NRD9 1551 aa24.84■■□□□ 1.57
COL9A3-206ENST00000466532 EPS15P42566 896 aa24.83■■□□□ 1.57
COL9A3-206ENST00000466532 ZNRF3Q9ULT6 936 aa24.83■■□□□ 1.57
COL9A3-206ENST00000466532 ELL2O00472 640 aaPredicted RBP24.82■■□□□ 1.56
COL9A3-206ENST00000466532 GOLGA2Q08379 1002 aa24.81■■□□□ 1.56
COL9A3-206ENST00000466532 RTL5Q5HYW3 569 aaPredicted RBP24.81■■□□□ 1.56
COL9A3-206ENST00000466532 TMC4Q7Z404 712 aa24.81■■□□□ 1.56
COL9A3-206ENST00000466532 RIC3Q7Z5B4 369 aa24.81■■□□□ 1.56
COL9A3-206ENST00000466532 COL4A1P02462 1669 aa24.81■■□□□ 1.56
COL9A3-206ENST00000466532 CXCL9Q07325 125 aa24.8■■□□□ 1.56
COL9A3-206ENST00000466532 PHAXQ9H814 394 aaKnown RBP24.8■■□□□ 1.56
COL9A3-206ENST00000466532 KIAA2012Q0VF49 1180 aa24.79■■□□□ 1.56
COL9A3-206ENST00000466532 TRIM28Q13263 835 aaKnown RBP24.79■■□□□ 1.56
COL9A3-206ENST00000466532 SF3B3Q15393 1217 aaKnown RBP24.79■■□□□ 1.56
COL9A3-206ENST00000466532 USP50Q70EL3 339 aaPredicted RBP24.79■■□□□ 1.56
COL9A3-206ENST00000466532 C8orf58Q8NAV2 365 aa24.78■■□□□ 1.56
COL9A3-206ENST00000466532 MYH3P11055 1940 aa24.77■■□□□ 1.56
COL9A3-206ENST00000466532 IRS4O14654 1257 aaPredicted RBP24.77■■□□□ 1.56
COL9A3-206ENST00000466532 CELF1Q92879 486 aaKnown RBP24.77■■□□□ 1.56
COL9A3-206ENST00000466532 GPRC5DQ9NZD1 345 aa24.77■■□□□ 1.56
COL9A3-206ENST00000466532 CIAPIN1Q6FI81 312 aa24.76■■□□□ 1.55
COL9A3-206ENST00000466532 ADARB2Q9NS39 739 aaKnown RBP24.76■■□□□ 1.55
COL9A3-206ENST00000466532 RAD17O75943 681 aa24.75■■□□□ 1.55
COL9A3-206ENST00000466532 VEGFBP49765 207 aa24.75■■□□□ 1.55
COL9A3-206ENST00000466532 GMPSP49915 693 aaPredicted RBP24.75■■□□□ 1.55
COL9A3-206ENST00000466532 CCDC184Q52MB2 194 aa24.75■■□□□ 1.55
COL9A3-206ENST00000466532 MYD88Q99836 296 aa24.75■■□□□ 1.55
COL9A3-206ENST00000466532 TNS4Q8IZW8 715 aa24.74■■□□□ 1.55
COL9A3-206ENST00000466532 ZBTB38Q8NAP3 1195 aaPredicted RBP24.74■■□□□ 1.55
COL9A3-206ENST00000466532 NSFL1CQ9UNZ2 370 aaKnown RBP24.74■■□□□ 1.55
COL9A3-206ENST00000466532 SPEF2Q9C093 1822 aa24.73■■□□□ 1.55
COL9A3-206ENST00000466532 TNIP1Q15025 636 aa24.73■■□□□ 1.55
COL9A3-206ENST00000466532 CCDC30Q5VVM6 783 aa24.73■■□□□ 1.55
COL9A3-206ENST00000466532 BCL2L13Q9BXK5 485 aa24.73■■□□□ 1.55
COL9A3-206ENST00000466532 ABT1Q9ULW3 272 aaKnown RBP24.73■■□□□ 1.55
COL9A3-206ENST00000466532 CDHR2Q9BYE9 1310 aa24.72■■□□□ 1.55
COL9A3-206ENST00000466532 RASSF10A6NK89 507 aa24.72■■□□□ 1.55
COL9A3-206ENST00000466532 FMR1Q06787 632 aaKnown RBP eCLIP24.72■■□□□ 1.55
COL9A3-206ENST00000466532 WASHC4Q2M389 1173 aa24.72■■□□□ 1.55
COL9A3-206ENST00000466532 DEFB115Q30KQ5 88 aa24.72■■□□□ 1.55
COL9A3-206ENST00000466532 CHMP4AQ9BY43 222 aa24.72■■□□□ 1.55
COL9A3-206ENST00000466532 CACNA1FO60840 1977 aa24.71■■□□□ 1.55
COL9A3-206ENST00000466532 YDJCA8MPS7 323 aa24.71■■□□□ 1.55
COL9A3-206ENST00000466532 DDX58O95786 925 aaKnown RBP24.71■■□□□ 1.55
COL9A3-206ENST00000466532 TSPYL6Q8N831 410 aa24.71■■□□□ 1.55
COL9A3-206ENST00000466532 CCDC191Q8NCU4 936 aa24.71■■□□□ 1.55
COL9A3-206ENST00000466532 POLR2AP24928 1970 aaKnown RBP24.71■■□□□ 1.55
COL9A3-206ENST00000466532 HSP90B1P14625 803 aaKnown RBP24.7■■□□□ 1.54
COL9A3-206ENST00000466532 RPS8P62241 208 aaKnown RBP24.7■■□□□ 1.54
COL9A3-206ENST00000466532 GPSM2P81274 684 aa24.7■■□□□ 1.54
COL9A3-206ENST00000466532 TSR2Q969E8 191 aaKnown RBP24.7■■□□□ 1.54
COL9A3-206ENST00000466532 SCN9AQ15858 1988 aa24.69■■□□□ 1.54
COL9A3-206ENST00000466532 C6orf229H3BNL8 230 aa24.69■■□□□ 1.54
COL9A3-206ENST00000466532 TRAF5O00463 557 aa24.69■■□□□ 1.54
COL9A3-206ENST00000466532 PCCAP05165 728 aaPredicted RBP24.69■■□□□ 1.54
COL9A3-206ENST00000466532 METTL22Q9BUU2 404 aaPredicted RBP24.69■■□□□ 1.54
COL9A3-206ENST00000466532 CWC25Q9NXE8 425 aaPredicted RBP24.69■■□□□ 1.54
COL9A3-206ENST00000466532 POLLQ9UGP5 575 aa24.69■■□□□ 1.54
COL9A3-206ENST00000466532 PSME4Q14997 1843 aa24.68■■□□□ 1.54
COL9A3-206ENST00000466532 RIMBP2O15034 1052 aa24.68■■□□□ 1.54
COL9A3-206ENST00000466532 FOXN1O15353 648 aa24.68■■□□□ 1.54
COL9A3-206ENST00000466532 DBNDD1Q9H9R9 158 aa24.68■■□□□ 1.54
COL9A3-206ENST00000466532 SEC31BQ9NQW1 1179 aa24.68■■□□□ 1.54
COL9A3-206ENST00000466532 CCDC27Q2M243 656 aa24.67■■□□□ 1.54
COL9A3-206ENST00000466532 JARID2Q92833 1246 aaPredicted RBP24.67■■□□□ 1.54
COL9A3-206ENST00000466532 AIDAQ96BJ3 306 aa24.67■■□□□ 1.54
COL9A3-206ENST00000466532 EYA3Q99504 573 aa24.67■■□□□ 1.54
COL9A3-206ENST00000466532 MAP3K2Q9Y2U5 619 aa24.67■■□□□ 1.54
COL9A3-206ENST00000466532 THSD7BQ9C0I4 1608 aa24.67■■□□□ 1.54
COL9A3-206ENST00000466532 WDR33Q9C0J8 1336 aaKnown RBP24.66■■□□□ 1.54
COL9A3-206ENST00000466532 PDE8AO60658 829 aa24.66■■□□□ 1.54
COL9A3-206ENST00000466532 CCDC152Q4G0S7 254 aa24.66■■□□□ 1.54
COL9A3-206ENST00000466532 WWC1Q8IX03 1113 aa24.66■■□□□ 1.54
COL9A3-206ENST00000466532 CNOT7Q9UIV1 285 aaKnown RBP24.66■■□□□ 1.54
COL9A3-206ENST00000466532 CST9Q5W186 159 aa24.65■■□□□ 1.54
COL9A3-206ENST00000466532 TBC1D16Q8TBP0 767 aa24.65■■□□□ 1.54
COL9A3-206ENST00000466532 TRPM4Q8TD43 1214 aa24.65■■□□□ 1.54
COL9A3-206ENST00000466532 GPR101Q96P66 508 aaPredicted RBP24.65■■□□□ 1.54
COL9A3-206ENST00000466532 STK31Q9BXU1 1019 aa24.65■■□□□ 1.54
COL9A3-206ENST00000466532 SHTN1A0MZ66 631 aa24.64■■□□□ 1.54
COL9A3-206ENST00000466532 PSMD14O00487 310 aa24.64■■□□□ 1.54
COL9A3-206ENST00000466532 ECE2O60344 883 aa24.64■■□□□ 1.54
COL9A3-206ENST00000466532 CAPN15O75808 1086 aa24.64■■□□□ 1.54
COL9A3-206ENST00000466532 HIRAP54198 1017 aaPredicted RBP24.64■■□□□ 1.54
COL9A3-206ENST00000466532 KSR2Q6VAB6 950 aa24.64■■□□□ 1.54
COL9A3-206ENST00000466532 CCDC85AQ96PX6 553 aaPredicted RBP24.64■■□□□ 1.54
COL9A3-206ENST00000466532 PGAP2Q9UHJ9 254 aa24.64■■□□□ 1.54
COL9A3-206ENST00000466532 ZBTB12Q9Y330 459 aaPredicted RBP24.64■■□□□ 1.54
COL9A3-206ENST00000466532 PI4KAP2A4QPH2 592 aa24.63■■□□□ 1.53
COL9A3-206ENST00000466532 H7C1D1 291 aa24.63■■□□□ 1.53
COL9A3-206ENST00000466532 DOK7Q18PE1 504 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms