RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SCG3Q8WXD2 468 aaKnown RBP8.81□□□□□ -1
LRCH3-211ENST00000466054 OAS3Q9Y6K5 1087 aaKnown RBP8.81□□□□□ -1
LRCH3-211ENST00000466054 USP17L3A6NCW0 530 aa8.8□□□□□ -1
LRCH3-211ENST00000466054 USP17L4A6NCW7 530 aa8.8□□□□□ -1
LRCH3-211ENST00000466054 DLL1O00548 723 aa8.8□□□□□ -1
LRCH3-211ENST00000466054 RTN1Q16799 776 aa8.8□□□□□ -1
LRCH3-211ENST00000466054 USP17L2Q6R6M4 530 aa8.8□□□□□ -1
LRCH3-211ENST00000466054 USP17L1Q7RTZ2 530 aa8.8□□□□□ -1
LRCH3-211ENST00000466054 TRPM4Q8TD43 1214 aa8.8□□□□□ -1
LRCH3-211ENST00000466054 TTC9Q92623 222 aa8.8□□□□□ -1
LRCH3-211ENST00000466054 ZNF594Q96JF6 807 aaPredicted RBP8.8□□□□□ -1
LRCH3-211ENST00000466054 STOML1Q9UBI4 398 aa8.8□□□□□ -1
LRCH3-211ENST00000466054 RAXQ9Y2V3 346 aa8.8□□□□□ -1
LRCH3-211ENST00000466054 ATAD2Q6PL18 1390 aa8.8□□□□□ -1
LRCH3-211ENST00000466054 IGLV1-40P01703 118 aa8.79□□□□□ -1
LRCH3-211ENST00000466054 GRIK1P39086 918 aa8.79□□□□□ -1
LRCH3-211ENST00000466054 GPLD1P80108 840 aa8.79□□□□□ -1
LRCH3-211ENST00000466054 PLAURQ03405 335 aa8.79□□□□□ -1
LRCH3-211ENST00000466054 STAG2Q8N3U4 1231 aa8.79□□□□□ -1
LRCH3-211ENST00000466054 GAS2L2Q8NHY3 880 aa8.79□□□□□ -1
LRCH3-211ENST00000466054 C2orf49Q9BVC5 232 aaPredicted RBP8.79□□□□□ -1
LRCH3-211ENST00000466054 F8W735 103 aaPredicted RBP8.78□□□□□ -1
LRCH3-211ENST00000466054 TGFB1P01137 390 aa8.78□□□□□ -1
LRCH3-211ENST00000466054 FZD5Q13467 585 aa8.78□□□□□ -1
LRCH3-211ENST00000466054 HFE2Q6ZVN8 426 aa8.78□□□□□ -1
LRCH3-211ENST00000466054 C14orf37Q86TY3 774 aa8.78□□□□□ -1
LRCH3-211ENST00000466054 PLEKHM2Q8IWE5 1019 aa8.78□□□□□ -1
LRCH3-211ENST00000466054 TMEM130Q8N3G9 435 aa8.78□□□□□ -1
LRCH3-211ENST00000466054 C21orf2O43822 256 aa8.77□□□□□ -1.01
LRCH3-211ENST00000466054 GDF6Q6KF10 455 aaPredicted RBP8.77□□□□□ -1.01
LRCH3-211ENST00000466054 KRTAP4-7Q9BYR0 210 aa8.77□□□□□ -1.01
LRCH3-211ENST00000466054 SRA1Q9HD15 236 aaKnown RBP8.77□□□□□ -1.01
LRCH3-211ENST00000466054 KIAA1324LA8MWY0 1029 aaPredicted RBP8.76□□□□□ -1.01
LRCH3-211ENST00000466054 ZBTB42B2RXF5 422 aa8.76□□□□□ -1.01
LRCH3-211ENST00000466054 TARSP26639 723 aaKnown RBP8.76□□□□□ -1.01
LRCH3-211ENST00000466054 IDH3AP50213 366 aa8.76□□□□□ -1.01
LRCH3-211ENST00000466054 MCM6Q14566 821 aa8.76□□□□□ -1.01
LRCH3-211ENST00000466054 RBSNQ9H1K0 784 aa8.76□□□□□ -1.01
LRCH3-211ENST00000466054 ZFATQ9P243 1243 aa8.76□□□□□ -1.01
LRCH3-211ENST00000466054 MKRN1Q9UHC7 482 aaKnown RBP8.76□□□□□ -1.01
LRCH3-211ENST00000466054 DHX15O43143 795 aaKnown RBP8.75□□□□□ -1.01
LRCH3-211ENST00000466054 SASH3O75995 380 aa8.75□□□□□ -1.01
LRCH3-211ENST00000466054 ARSDP51689 593 aa8.75□□□□□ -1.01
LRCH3-211ENST00000466054 MAP4K3Q8IVH8 894 aa8.75□□□□□ -1.01
LRCH3-211ENST00000466054 SIX5Q8N196 739 aa8.75□□□□□ -1.01
LRCH3-211ENST00000466054 IL22RA1Q8N6P7 574 aa8.75□□□□□ -1.01
LRCH3-211ENST00000466054 TIMELESSQ9UNS1 1208 aa8.75□□□□□ -1.01
LRCH3-211ENST00000466054 COG6Q9Y2V7 657 aa8.75□□□□□ -1.01
LRCH3-211ENST00000466054 GHRHP01286 108 aa8.74□□□□□ -1.01
LRCH3-211ENST00000466054 RASA1P20936 1047 aa8.74□□□□□ -1.01
LRCH3-211ENST00000466054 INTS5Q6P9B9 1019 aaKnown RBP8.74□□□□□ -1.01
LRCH3-211ENST00000466054 AGGF1Q8N302 714 aaeCLIP8.74□□□□□ -1.01
LRCH3-211ENST00000466054 PLD4Q96BZ4 506 aa8.74□□□□□ -1.01
LRCH3-211ENST00000466054 HINFPQ9BQA5 517 aa8.74□□□□□ -1.01
LRCH3-211ENST00000466054 MED26O95402 600 aa8.73□□□□□ -1.01
LRCH3-211ENST00000466054 NRLP54845 237 aa8.73□□□□□ -1.01
LRCH3-211ENST00000466054 IFT43Q96FT9 208 aa8.73□□□□□ -1.01
LRCH3-211ENST00000466054 INPP5BP32019 993 aa8.72□□□□□ -1.01
LRCH3-211ENST00000466054 SEC13P55735 322 aa8.72□□□□□ -1.01
LRCH3-211ENST00000466054 LCE1DQ5T752 114 aa8.72□□□□□ -1.01
LRCH3-211ENST00000466054 KLK14Q9P0G3 267 aa8.72□□□□□ -1.01
LRCH3-211ENST00000466054 DMGDHQ9UI17 866 aaKnown RBP8.72□□□□□ -1.01
LRCH3-211ENST00000466054 BCS1LQ9Y276 419 aa8.72□□□□□ -1.01
LRCH3-211ENST00000466054 ATP9BO43861 1147 aa8.71□□□□□ -1.02
LRCH3-211ENST00000466054 RAD21O60216 631 aa8.71□□□□□ -1.02
LRCH3-211ENST00000466054 PSAPP07602 524 aa8.71□□□□□ -1.02
LRCH3-211ENST00000466054 CEP41Q9BYV8 373 aa8.71□□□□□ -1.02
LRCH3-211ENST00000466054 C11orf16Q9NQ32 467 aa8.71□□□□□ -1.02
LRCH3-211ENST00000466054 J3QW42 95 aa8.69□□□□□ -1.02
LRCH3-211ENST00000466054 WNT11O96014 354 aa8.69□□□□□ -1.02
LRCH3-211ENST00000466054 UBTFP17480 764 aaKnown RBP8.69□□□□□ -1.02
LRCH3-211ENST00000466054 NFIAQ12857 509 aa8.69□□□□□ -1.02
LRCH3-211ENST00000466054 DGKZQ13574 1117 aa8.69□□□□□ -1.02
LRCH3-211ENST00000466054 Q6ZS46 218 aa8.69□□□□□ -1.02
LRCH3-211ENST00000466054 UTP4Q969X6 686 aaKnown RBP8.69□□□□□ -1.02
LRCH3-211ENST00000466054 VTI1AQ96AJ9 217 aa8.69□□□□□ -1.02
LRCH3-211ENST00000466054 MUC3BQ9H195 1237 aa8.69□□□□□ -1.02
LRCH3-211ENST00000466054 TLR7Q9NYK1 1049 aaKnown RBP8.69□□□□□ -1.02
LRCH3-211ENST00000466054 LOC102724428A0A0B4J2F2 783 aa8.68□□□□□ -1.02
LRCH3-211ENST00000466054 GRNP28799 593 aaKnown RBP8.68□□□□□ -1.02
LRCH3-211ENST00000466054 SIK1P57059 783 aa8.68□□□□□ -1.02
LRCH3-211ENST00000466054 ZDHHC13Q8IUH4 622 aa8.68□□□□□ -1.02
LRCH3-211ENST00000466054 NSUN5Q96P11 429 aaKnown RBP8.68□□□□□ -1.02
LRCH3-211ENST00000466054 ZMYND15Q9H091 742 aa8.68□□□□□ -1.02
LRCH3-211ENST00000466054 MICAL2O94851 1124 aa8.67□□□□□ -1.02
LRCH3-211ENST00000466054 SETDB1Q15047 1291 aa8.67□□□□□ -1.02
LRCH3-211ENST00000466054 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.67□□□□□ -1.02
LRCH3-211ENST00000466054 XYLBO75191 536 aa8.66□□□□□ -1.02
LRCH3-211ENST00000466054 SPINK2P20155 84 aa8.66□□□□□ -1.02
LRCH3-211ENST00000466054 LARP1Q6PKG0 1096 aaKnown RBP8.66□□□□□ -1.02
LRCH3-211ENST00000466054 ACAD11Q709F0 780 aa8.66□□□□□ -1.02
LRCH3-211ENST00000466054 CACTIN-AS1Q8N1I8 211 aa8.66□□□□□ -1.02
LRCH3-211ENST00000466054 UBL7Q96S82 380 aaPredicted RBP8.66□□□□□ -1.02
LRCH3-211ENST00000466054 PPME1Q9Y570 386 aa8.66□□□□□ -1.02
LRCH3-211ENST00000466054 A6NJR5 290 aa8.65□□□□□ -1.02
LRCH3-211ENST00000466054 UVSSAQ2YD98 709 aa8.65□□□□□ -1.02
LRCH3-211ENST00000466054 HDGFL1Q5TGJ6 251 aa8.65□□□□□ -1.02
LRCH3-211ENST00000466054 CMTR1Q8N1G2 835 aaKnown RBP8.65□□□□□ -1.02
LRCH3-211ENST00000466054 DBNDD2Q9BQY9 259 aa8.65□□□□□ -1.02
LRCH3-211ENST00000466054 C7orf69Q9H7B7 122 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms