RNA–Protein interactions for RNA: ENST00000465937.1

LIMK2-207, Transcript of LIM domain kinase 2, humanhuman

TSL 3

Gene LIMK2, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-207ENST00000465937 DDX46Q7L014 1031 aaKnown RBP17■□□□□ 0.31
LIMK2-207ENST00000465937 SP8Q8IXZ3 490 aa17■□□□□ 0.31
LIMK2-207ENST00000465937 COL4A1P02462 1669 aa17■□□□□ 0.31
LIMK2-207ENST00000465937 KIF3CO14782 793 aa16.99■□□□□ 0.31
LIMK2-207ENST00000465937 BRPF1P55201 1214 aaPredicted RBP16.99■□□□□ 0.31
LIMK2-207ENST00000465937 ALDH1L2Q3SY69 923 aa16.99■□□□□ 0.31
LIMK2-207ENST00000465937 RTL5Q5HYW3 569 aaPredicted RBP16.99■□□□□ 0.31
LIMK2-207ENST00000465937 TMC4Q7Z404 712 aa16.99■□□□□ 0.31
LIMK2-207ENST00000465937 SSH1Q8WYL5 1049 aa16.99■□□□□ 0.31
LIMK2-207ENST00000465937 PLA2G12BQ9BX93 195 aa16.99■□□□□ 0.31
LIMK2-207ENST00000465937 RTFDC1Q9BY42 306 aaPredicted RBP16.99■□□□□ 0.31
LIMK2-207ENST00000465937 GPBP1L1Q9HC44 474 aaPredicted RBP16.99■□□□□ 0.31
LIMK2-207ENST00000465937 LRRC37AA6NMS7 1700 aa16.99■□□□□ 0.31
LIMK2-207ENST00000465937 TIAM2Q8IVF5 1701 aa16.99■□□□□ 0.31
LIMK2-207ENST00000465937 F6X3S4 739 aa16.98■□□□□ 0.31
LIMK2-207ENST00000465937 JARID2Q92833 1246 aaPredicted RBP16.98■□□□□ 0.31
LIMK2-207ENST00000465937 GLTPD2A6NH11 291 aa16.97■□□□□ 0.31
LIMK2-207ENST00000465937 CELF1Q92879 486 aaKnown RBP16.97■□□□□ 0.31
LIMK2-207ENST00000465937 ZNF277Q9NRM2 450 aaPredicted RBP16.97■□□□□ 0.31
LIMK2-207ENST00000465937 RTL9Q8NET4 1388 aa16.97■□□□□ 0.31
LIMK2-207ENST00000465937 TTLL11Q8NHH1 800 aa16.96■□□□□ 0.31
LIMK2-207ENST00000465937 VPS33BQ9H267 617 aa16.96■□□□□ 0.31
LIMK2-207ENST00000465937 MYH3P11055 1940 aa16.96■□□□□ 0.3
LIMK2-207ENST00000465937 PTPRCP08575 1304 aa16.96■□□□□ 0.3
LIMK2-207ENST00000465937 COL4A5P29400 1685 aa16.95■□□□□ 0.3
LIMK2-207ENST00000465937 IARSP41252 1262 aaKnown RBP16.95■□□□□ 0.3
LIMK2-207ENST00000465937 CTSWP56202 376 aa16.95■□□□□ 0.3
LIMK2-207ENST00000465937 RPS8P62241 208 aaKnown RBP16.95■□□□□ 0.3
LIMK2-207ENST00000465937 CCDC152Q4G0S7 254 aa16.95■□□□□ 0.3
LIMK2-207ENST00000465937 UBE3BQ7Z3V4 1068 aa16.95■□□□□ 0.3
LIMK2-207ENST00000465937 ZNF526Q8TF50 670 aaPredicted RBP16.95■□□□□ 0.3
LIMK2-207ENST00000465937 NMRK2Q9NPI5 230 aa16.95■□□□□ 0.3
LIMK2-207ENST00000465937 SEC31BQ9NQW1 1179 aa16.95■□□□□ 0.3
LIMK2-207ENST00000465937 KDM2BQ8NHM5 1336 aa16.95■□□□□ 0.3
LIMK2-207ENST00000465937 LTBP1Q14766 1721 aa16.94■□□□□ 0.3
LIMK2-207ENST00000465937 FZD9O00144 591 aa16.94■□□□□ 0.3
LIMK2-207ENST00000465937 ALDH1L1O75891 902 aa16.94■□□□□ 0.3
LIMK2-207ENST00000465937 CSF1RP07333 972 aa16.94■□□□□ 0.3
LIMK2-207ENST00000465937 DUOX1Q9NRD9 1551 aa16.94■□□□□ 0.3
LIMK2-207ENST00000465937 WDR90Q96KV7 1748 aa16.93■□□□□ 0.3
LIMK2-207ENST00000465937 POTECB2RU33 542 aa16.93■□□□□ 0.3
LIMK2-207ENST00000465937 C1QTNF8P60827 252 aa16.93■□□□□ 0.3
LIMK2-207ENST00000465937 HNRNPUQ00839 825 aaKnown RBP eCLIP16.92■□□□□ 0.3
LIMK2-207ENST00000465937 MPNDQ8N594 471 aa16.92■□□□□ 0.3
LIMK2-207ENST00000465937 UTYO14607 1347 aa16.92■□□□□ 0.3
LIMK2-207ENST00000465937 RARSP54136 660 aaKnown RBP16.91■□□□□ 0.3
LIMK2-207ENST00000465937 FOXO4P98177 505 aa16.91■□□□□ 0.3
LIMK2-207ENST00000465937 DPY19L2Q6NUT2 758 aa16.91■□□□□ 0.3
LIMK2-207ENST00000465937 SUPT20HQ8NEM7 779 aa16.91■□□□□ 0.3
LIMK2-207ENST00000465937 GREM2Q9H772 168 aa16.91■□□□□ 0.3
LIMK2-207ENST00000465937 PODXL2Q9NZ53 605 aa16.91■□□□□ 0.3
LIMK2-207ENST00000465937 ZBED9Q6R2W3 1325 aa16.91■□□□□ 0.3
LIMK2-207ENST00000465937 GRM8O00222 908 aa16.9■□□□□ 0.3
LIMK2-207ENST00000465937 DPP8Q6V1X1 898 aaPredicted RBP16.9■□□□□ 0.3
LIMK2-207ENST00000465937 L3MBTL3Q96JM7 780 aaPredicted RBP16.9■□□□□ 0.3
LIMK2-207ENST00000465937 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
LIMK2-207ENST00000465937 SRCIN1Q9C0H9 1055 aa16.9■□□□□ 0.3
LIMK2-207ENST00000465937 TMX4Q9H1E5 349 aaPredicted RBP16.9■□□□□ 0.3
LIMK2-207ENST00000465937 RRAGCQ9HB90 399 aa16.9■□□□□ 0.3
LIMK2-207ENST00000465937 KIAA2012Q0VF49 1180 aa16.89■□□□□ 0.29
LIMK2-207ENST00000465937 SMC4Q9NTJ3 1288 aa16.89■□□□□ 0.29
LIMK2-207ENST00000465937 ZNF541Q9H0D2 1346 aa16.89■□□□□ 0.29
LIMK2-207ENST00000465937 TOMM70O94826 608 aa16.88■□□□□ 0.29
LIMK2-207ENST00000465937 DDNO94850 711 aaPredicted RBP16.88■□□□□ 0.29
LIMK2-207ENST00000465937 GPSM2P81274 684 aa16.88■□□□□ 0.29
LIMK2-207ENST00000465937 EPHA10Q5JZY3 1008 aa16.88■□□□□ 0.29
LIMK2-207ENST00000465937 KAZALD1Q96I82 304 aa16.88■□□□□ 0.29
LIMK2-207ENST00000465937 CCDC85AQ96PX6 553 aaPredicted RBP16.88■□□□□ 0.29
LIMK2-207ENST00000465937 BSDC1Q9NW68 430 aaPredicted RBP16.88■□□□□ 0.29
LIMK2-207ENST00000465937 POLLQ9UGP5 575 aa16.88■□□□□ 0.29
LIMK2-207ENST00000465937 VEGFAP15692 232 aaPredicted RBP16.87■□□□□ 0.29
LIMK2-207ENST00000465937 AOC3Q16853 763 aa16.87■□□□□ 0.29
LIMK2-207ENST00000465937 SLC4A10Q6U841 1118 aa16.87■□□□□ 0.29
LIMK2-207ENST00000465937 ANKRD18AQ8IVF6 992 aa16.87■□□□□ 0.29
LIMK2-207ENST00000465937 LARGE2Q8N3Y3 721 aa16.87■□□□□ 0.29
LIMK2-207ENST00000465937 JDP2Q8WYK2 163 aa16.87■□□□□ 0.29
LIMK2-207ENST00000465937 ARHGAP45Q92619 1136 aa16.87■□□□□ 0.29
LIMK2-207ENST00000465937 CDC5LQ99459 802 aaKnown RBP16.87■□□□□ 0.29
LIMK2-207ENST00000465937 PPIP5K2O43314 1243 aa16.86■□□□□ 0.29
LIMK2-207ENST00000465937 TBC1D16Q8TBP0 767 aa16.86■□□□□ 0.29
LIMK2-207ENST00000465937 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
LIMK2-207ENST00000465937 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
LIMK2-207ENST00000465937 NSFL1CQ9UNZ2 370 aaKnown RBP16.86■□□□□ 0.29
LIMK2-207ENST00000465937 SCN4AP35499 1836 aa16.85■□□□□ 0.29
LIMK2-207ENST00000465937 NBPF7P0C2Y1 421 aaPredicted RBP16.85■□□□□ 0.29
LIMK2-207ENST00000465937 ITGA6P23229 1130 aa16.85■□□□□ 0.29
LIMK2-207ENST00000465937 FAM161AQ3B820 660 aa16.85■□□□□ 0.29
LIMK2-207ENST00000465937 GPC2Q8N158 579 aa16.85■□□□□ 0.29
LIMK2-207ENST00000465937 RBM46Q8TBY0 533 aaKnown RBP16.85■□□□□ 0.29
LIMK2-207ENST00000465937 C9orf78Q9NZ63 289 aaPredicted RBP16.85■□□□□ 0.29
LIMK2-207ENST00000465937 ZNRF3Q9ULT6 936 aa16.85■□□□□ 0.29
LIMK2-207ENST00000465937 MINPP1Q9UNW1 487 aa16.85■□□□□ 0.29
LIMK2-207ENST00000465937 RABL6Q3YEC7 729 aaPredicted RBP16.84■□□□□ 0.29
LIMK2-207ENST00000465937 NIM1KQ8IY84 436 aa16.84■□□□□ 0.29
LIMK2-207ENST00000465937 SUCLG2Q96I99 432 aa16.84■□□□□ 0.29
LIMK2-207ENST00000465937 XDHP47989 1333 aa16.83■□□□□ 0.28
LIMK2-207ENST00000465937 WASHC4Q2M389 1173 aa16.83■□□□□ 0.28
LIMK2-207ENST00000465937 LMBR1LQ6UX01 489 aa16.83■□□□□ 0.28
LIMK2-207ENST00000465937 API5Q9BZZ5 524 aaKnown RBP16.83■□□□□ 0.28
LIMK2-207ENST00000465937 KIF16BQ96L93 1317 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms