RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 NRXN2Q9P2S2 1712 aa13.53□□□□□ -0.24
NPHP3-203ENST00000465756 RPS8P62241 208 aaKnown RBP13.53□□□□□ -0.24
NPHP3-203ENST00000465756 CCDC57Q2TAC2 916 aa13.53□□□□□ -0.24
NPHP3-203ENST00000465756 PSMD1Q99460 953 aa13.53□□□□□ -0.24
NPHP3-203ENST00000465756 ATP6V0A2Q9Y487 856 aa13.53□□□□□ -0.24
NPHP3-203ENST00000465756 NEURL1BA8MQ27 555 aa13.53□□□□□ -0.24
NPHP3-203ENST00000465756 LRP10Q7Z4F1 713 aa13.53□□□□□ -0.24
NPHP3-203ENST00000465756 ARHGAP45Q92619 1136 aa13.53□□□□□ -0.24
NPHP3-203ENST00000465756 GNAI3P08754 354 aa13.52□□□□□ -0.24
NPHP3-203ENST00000465756 IFIT5Q13325 482 aaKnown RBP13.52□□□□□ -0.24
NPHP3-203ENST00000465756 UBE3BQ7Z3V4 1068 aa13.52□□□□□ -0.24
NPHP3-203ENST00000465756 GCKRQ14397 625 aa13.52□□□□□ -0.25
NPHP3-203ENST00000465756 C6orf229H3BNL8 230 aa13.52□□□□□ -0.25
NPHP3-203ENST00000465756 IARSP41252 1262 aaKnown RBP13.52□□□□□ -0.25
NPHP3-203ENST00000465756 TNIP1Q15025 636 aa13.52□□□□□ -0.25
NPHP3-203ENST00000465756 SYNE4Q8N205 404 aa13.52□□□□□ -0.25
NPHP3-203ENST00000465756 ANKIB1Q9P2G1 1089 aa13.52□□□□□ -0.25
NPHP3-203ENST00000465756 AFDNP55196 1824 aaKnown RBP13.52□□□□□ -0.25
NPHP3-203ENST00000465756 GRM8O00222 908 aa13.51□□□□□ -0.25
NPHP3-203ENST00000465756 PPIP5K2O43314 1243 aa13.51□□□□□ -0.25
NPHP3-203ENST00000465756 ATP2B4P23634 1241 aa13.51□□□□□ -0.25
NPHP3-203ENST00000465756 CTSWP56202 376 aa13.51□□□□□ -0.25
NPHP3-203ENST00000465756 ABCC12Q96J65 1359 aa13.51□□□□□ -0.25
NPHP3-203ENST00000465756 ZC3H12CQ9C0D7 883 aaKnown RBP13.51□□□□□ -0.25
NPHP3-203ENST00000465756 ZKSCAN2Q63HK3 967 aa13.51□□□□□ -0.25
NPHP3-203ENST00000465756 MRPL50Q8N5N7 158 aaKnown RBP13.51□□□□□ -0.25
NPHP3-203ENST00000465756 KCNA3P22001 575 aa13.5□□□□□ -0.25
NPHP3-203ENST00000465756 RTL5Q5HYW3 569 aaPredicted RBP13.5□□□□□ -0.25
NPHP3-203ENST00000465756 PLA2G12BQ9BX93 195 aa13.5□□□□□ -0.25
NPHP3-203ENST00000465756 GGA1Q9UJY5 639 aa13.5□□□□□ -0.25
NPHP3-203ENST00000465756 ANKRD36CQ5JPF3 1778 aa13.5□□□□□ -0.25
NPHP3-203ENST00000465756 UBTFL1P0CB47 393 aaPredicted RBP13.5□□□□□ -0.25
NPHP3-203ENST00000465756 ARFGEF1Q9Y6D6 1849 aa13.5□□□□□ -0.25
NPHP3-203ENST00000465756 ABCC4O15439 1325 aa13.49□□□□□ -0.25
NPHP3-203ENST00000465756 SSH1Q8WYL5 1049 aa13.49□□□□□ -0.25
NPHP3-203ENST00000465756 H7C1W4 665 aa13.49□□□□□ -0.25
NPHP3-203ENST00000465756 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
NPHP3-203ENST00000465756 NSFL1CQ9UNZ2 370 aaKnown RBP13.49□□□□□ -0.25
NPHP3-203ENST00000465756 BRPF1P55201 1214 aaPredicted RBP13.48□□□□□ -0.25
NPHP3-203ENST00000465756 CNNM1Q9NRU3 951 aa13.48□□□□□ -0.25
NPHP3-203ENST00000465756 RTL9Q8NET4 1388 aa13.48□□□□□ -0.25
NPHP3-203ENST00000465756 XDHP47989 1333 aa13.48□□□□□ -0.25
NPHP3-203ENST00000465756 G2E3Q7L622 706 aa13.48□□□□□ -0.25
NPHP3-203ENST00000465756 N4BP2Q86UW6 1770 aaPredicted RBP13.48□□□□□ -0.25
NPHP3-203ENST00000465756 BCL2L13Q9BXK5 485 aa13.48□□□□□ -0.25
NPHP3-203ENST00000465756 ZNF784Q8NCA9 323 aaPredicted RBP13.47□□□□□ -0.25
NPHP3-203ENST00000465756 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
NPHP3-203ENST00000465756 LEMD3Q9Y2U8 911 aa13.47□□□□□ -0.25
NPHP3-203ENST00000465756 ADCY9O60503 1353 aa13.47□□□□□ -0.25
NPHP3-203ENST00000465756 RASSF7Q02833 373 aa13.46□□□□□ -0.25
NPHP3-203ENST00000465756 CWF19L2Q2TBE0 894 aaKnown RBP13.46□□□□□ -0.25
NPHP3-203ENST00000465756 GLTPD2A6NH11 291 aa13.46□□□□□ -0.25
NPHP3-203ENST00000465756 MMP14P50281 582 aa13.46□□□□□ -0.25
NPHP3-203ENST00000465756 BEND3Q5T5X7 828 aa13.46□□□□□ -0.26
NPHP3-203ENST00000465756 ZNF526Q8TF50 670 aaPredicted RBP13.46□□□□□ -0.26
NPHP3-203ENST00000465756 UFL1O94874 794 aa13.45□□□□□ -0.26
NPHP3-203ENST00000465756 TRMT2AQ8IZ69 625 aaKnown RBP13.45□□□□□ -0.26
NPHP3-203ENST00000465756 CDCA7LQ96GN5 454 aa13.45□□□□□ -0.26
NPHP3-203ENST00000465756 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
NPHP3-203ENST00000465756 WASHC4Q2M389 1173 aa13.45□□□□□ -0.26
NPHP3-203ENST00000465756 PNMA8AQ86V59 439 aaPredicted RBP13.45□□□□□ -0.26
NPHP3-203ENST00000465756 F6X3S4 739 aa13.45□□□□□ -0.26
NPHP3-203ENST00000465756 CIAPIN1Q6FI81 312 aa13.45□□□□□ -0.26
NPHP3-203ENST00000465756 BSDC1Q9NW68 430 aaPredicted RBP13.45□□□□□ -0.26
NPHP3-203ENST00000465756 ZNRF3Q9ULT6 936 aa13.45□□□□□ -0.26
NPHP3-203ENST00000465756 ARFGEF2Q9Y6D5 1785 aa13.45□□□□□ -0.26
NPHP3-203ENST00000465756 RARSP54136 660 aaKnown RBP13.44□□□□□ -0.26
NPHP3-203ENST00000465756 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
NPHP3-203ENST00000465756 IGKV5-2P06315 115 aa13.44□□□□□ -0.26
NPHP3-203ENST00000465756 SMC1BQ8NDV3 1235 aa13.44□□□□□ -0.26
NPHP3-203ENST00000465756 ZNF277Q9NRM2 450 aaPredicted RBP13.44□□□□□ -0.26
NPHP3-203ENST00000465756 HACL1Q9UJ83 578 aa13.44□□□□□ -0.26
NPHP3-203ENST00000465756 H7C1D1 291 aa13.43□□□□□ -0.26
NPHP3-203ENST00000465756 NFKBIEO00221 500 aa13.43□□□□□ -0.26
NPHP3-203ENST00000465756 ITGA6P23229 1130 aa13.43□□□□□ -0.26
NPHP3-203ENST00000465756 ATF7IPQ6VMQ6 1270 aa13.43□□□□□ -0.26
NPHP3-203ENST00000465756 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
NPHP3-203ENST00000465756 NOB1Q9ULX3 412 aaKnown RBP13.43□□□□□ -0.26
NPHP3-203ENST00000465756 GJA3Q9Y6H8 435 aa13.43□□□□□ -0.26
NPHP3-203ENST00000465756 ZNF804AQ7Z570 1209 aa13.43□□□□□ -0.26
NPHP3-203ENST00000465756 VPS37DQ86XT2 251 aa13.43□□□□□ -0.26
NPHP3-203ENST00000465756 HDAC9Q9UKV0 1011 aa13.43□□□□□ -0.26
NPHP3-203ENST00000465756 TTLL11Q8NHH1 800 aa13.43□□□□□ -0.26
NPHP3-203ENST00000465756 RBM46Q8TBY0 533 aaKnown RBP13.43□□□□□ -0.26
NPHP3-203ENST00000465756 RPS12P25398 132 aaKnown RBP13.42□□□□□ -0.26
NPHP3-203ENST00000465756 KIAA2012Q0VF49 1180 aa13.42□□□□□ -0.26
NPHP3-203ENST00000465756 LDHAL6AQ6ZMR3 332 aa13.42□□□□□ -0.26
NPHP3-203ENST00000465756 GNL3LQ9NVN8 582 aaKnown RBP13.42□□□□□ -0.26
NPHP3-203ENST00000465756 CLEC11AQ9Y240 323 aa13.42□□□□□ -0.26
NPHP3-203ENST00000465756 TOMM70O94826 608 aa13.42□□□□□ -0.26
NPHP3-203ENST00000465756 FSTL1Q12841 308 aa13.42□□□□□ -0.26
NPHP3-203ENST00000465756 LMBR1LQ6UX01 489 aa13.42□□□□□ -0.26
NPHP3-203ENST00000465756 GPC2Q8N158 579 aa13.42□□□□□ -0.26
NPHP3-203ENST00000465756 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
NPHP3-203ENST00000465756 MYO3BQ8WXR4 1341 aa13.42□□□□□ -0.26
NPHP3-203ENST00000465756 RTFDC1Q9BY42 306 aaPredicted RBP13.42□□□□□ -0.26
NPHP3-203ENST00000465756 HMMRO75330 724 aa13.41□□□□□ -0.26
NPHP3-203ENST00000465756 DZIP1LQ8IYY4 767 aaKnown RBP13.41□□□□□ -0.26
NPHP3-203ENST00000465756 C7orf43Q8WVR3 580 aa13.41□□□□□ -0.26
NPHP3-203ENST00000465756 CCDC85AQ96PX6 553 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms