RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 IGKV5-2P06315 115 aa27.99■■■□□ 2.07
LIME1-203ENST00000465591 FSTL1Q12841 308 aa27.99■■■□□ 2.07
LIME1-203ENST00000465591 GRIPAP1Q4V328 841 aa27.99■■■□□ 2.07
LIME1-203ENST00000465591 SP8Q8IXZ3 490 aa27.99■■■□□ 2.07
LIME1-203ENST00000465591 SCN4AP35499 1836 aa27.98■■■□□ 2.07
LIME1-203ENST00000465591 CELF1Q92879 486 aaKnown RBP27.98■■■□□ 2.07
LIME1-203ENST00000465591 CWC25Q9NXE8 425 aaPredicted RBP27.98■■■□□ 2.07
LIME1-203ENST00000465591 ZNF521Q96K83 1311 aa27.97■■■□□ 2.07
LIME1-203ENST00000465591 PCCAP05165 728 aaPredicted RBP27.97■■■□□ 2.07
LIME1-203ENST00000465591 SMC1BQ8NDV3 1235 aa27.97■■■□□ 2.07
LIME1-203ENST00000465591 L3MBTL3Q96JM7 780 aaPredicted RBP27.97■■■□□ 2.07
LIME1-203ENST00000465591 DUOX1Q9NRD9 1551 aa27.96■■■□□ 2.07
LIME1-203ENST00000465591 POTEIP0CG38 1075 aa27.96■■■□□ 2.07
LIME1-203ENST00000465591 POTEJP0CG39 1038 aa27.96■■■□□ 2.07
LIME1-203ENST00000465591 LARGE2Q8N3Y3 721 aa27.96■■■□□ 2.07
LIME1-203ENST00000465591 JDP2Q8WYK2 163 aa27.95■■■□□ 2.06
LIME1-203ENST00000465591 RTFDC1Q9BY42 306 aaPredicted RBP27.95■■■□□ 2.06
LIME1-203ENST00000465591 APLP1P51693 650 aa27.94■■■□□ 2.06
LIME1-203ENST00000465591 FLIIQ13045 1269 aa27.94■■■□□ 2.06
LIME1-203ENST00000465591 AOC3Q16853 763 aa27.94■■■□□ 2.06
LIME1-203ENST00000465591 CWF19L2Q2TBE0 894 aaKnown RBP27.94■■■□□ 2.06
LIME1-203ENST00000465591 PPIP5K2O43314 1243 aa27.93■■■□□ 2.06
LIME1-203ENST00000465591 HTRA3P83110 453 aa27.93■■■□□ 2.06
LIME1-203ENST00000465591 DPP8Q6V1X1 898 aaPredicted RBP27.93■■■□□ 2.06
LIME1-203ENST00000465591 MPNDQ8N594 471 aa27.93■■■□□ 2.06
LIME1-203ENST00000465591 TMX4Q9H1E5 349 aaPredicted RBP27.93■■■□□ 2.06
LIME1-203ENST00000465591 MYH16Q9H6N6 1097 aa27.92■■■□□ 2.06
LIME1-203ENST00000465591 SEC31BQ9NQW1 1179 aa27.92■■■□□ 2.06
LIME1-203ENST00000465591 NEURL1BA8MQ27 555 aa27.91■■■□□ 2.06
LIME1-203ENST00000465591 TAF1DQ9H5J8 278 aaPredicted RBP27.91■■■□□ 2.06
LIME1-203ENST00000465591 LTBP1Q14766 1721 aa27.91■■■□□ 2.06
LIME1-203ENST00000465591 MYH3P11055 1940 aa27.9■■■□□ 2.06
LIME1-203ENST00000465591 PDE8AO60658 829 aa27.9■■■□□ 2.06
LIME1-203ENST00000465591 TMC4Q7Z404 712 aa27.9■■■□□ 2.06
LIME1-203ENST00000465591 GPC2Q8N158 579 aa27.9■■■□□ 2.06
LIME1-203ENST00000465591 CCDC85AQ96PX6 553 aaPredicted RBP27.9■■■□□ 2.06
LIME1-203ENST00000465591 CDHR2Q9BYE9 1310 aa27.9■■■□□ 2.06
LIME1-203ENST00000465591 EIF6P56537 245 aaKnown RBP27.89■■■□□ 2.06
LIME1-203ENST00000465591 FKBP5Q13451 457 aaPredicted RBP27.89■■■□□ 2.06
LIME1-203ENST00000465591 NIM1KQ8IY84 436 aa27.89■■■□□ 2.06
LIME1-203ENST00000465591 IQCA1LA6NCM1 817 aa27.88■■■□□ 2.05
LIME1-203ENST00000465591 NEXNQ0ZGT2 675 aa27.88■■■□□ 2.05
LIME1-203ENST00000465591 SUPT20HQ8NEM7 779 aa27.88■■■□□ 2.05
LIME1-203ENST00000465591 GJA3Q9Y6H8 435 aa27.88■■■□□ 2.05
LIME1-203ENST00000465591 RPS8P62241 208 aaKnown RBP27.87■■■□□ 2.05
LIME1-203ENST00000465591 KIAA2012Q0VF49 1180 aa27.87■■■□□ 2.05
LIME1-203ENST00000465591 DNAJC5GQ8N7S2 189 aa27.87■■■□□ 2.05
LIME1-203ENST00000465591 VPS33BQ9H267 617 aa27.87■■■□□ 2.05
LIME1-203ENST00000465591 ADAMTSL1Q8N6G6 1762 aa27.86■■■□□ 2.05
LIME1-203ENST00000465591 GPSM2P81274 684 aa27.86■■■□□ 2.05
LIME1-203ENST00000465591 DNAAF4Q8WXU2 420 aa27.86■■■□□ 2.05
LIME1-203ENST00000465591 HACL1Q9UJ83 578 aa27.86■■■□□ 2.05
LIME1-203ENST00000465591 HSP90B1P14625 803 aaKnown RBP27.85■■■□□ 2.05
LIME1-203ENST00000465591 CCDC152Q4G0S7 254 aa27.85■■■□□ 2.05
LIME1-203ENST00000465591 CHADLQ6NUI6 762 aa27.85■■■□□ 2.05
LIME1-203ENST00000465591 NSFL1CQ9UNZ2 370 aaKnown RBP27.85■■■□□ 2.05
LIME1-203ENST00000465591 H7C1W4 665 aa27.84■■■□□ 2.05
LIME1-203ENST00000465591 EPHX2P34913 555 aa27.84■■■□□ 2.05
LIME1-203ENST00000465591 SPEF2Q9C093 1822 aa27.83■■■□□ 2.05
LIME1-203ENST00000465591 F6X3S4 739 aa27.83■■■□□ 2.05
LIME1-203ENST00000465591 SCNN1DP51172 638 aa27.83■■■□□ 2.05
LIME1-203ENST00000465591 CTSWP56202 376 aa27.83■■■□□ 2.05
LIME1-203ENST00000465591 GCKRQ14397 625 aa27.83■■■□□ 2.05
LIME1-203ENST00000465591 UBE3BQ7Z3V4 1068 aa27.83■■■□□ 2.05
LIME1-203ENST00000465591 POLLQ9UGP5 575 aa27.83■■■□□ 2.05
LIME1-203ENST00000465591 ZNRF3Q9ULT6 936 aa27.83■■■□□ 2.05
LIME1-203ENST00000465591 CXCL9Q07325 125 aa27.82■■■□□ 2.04
LIME1-203ENST00000465591 EAPPQ56P03 285 aaPredicted RBP27.82■■■□□ 2.04
LIME1-203ENST00000465591 TTLL11Q8NHH1 800 aa27.82■■■□□ 2.04
LIME1-203ENST00000465591 GPR101Q96P66 508 aaPredicted RBP27.82■■■□□ 2.04
LIME1-203ENST00000465591 YDJCA8MPS7 323 aa27.81■■■□□ 2.04
LIME1-203ENST00000465591 CCER2I3L3R5 266 aa27.81■■■□□ 2.04
LIME1-203ENST00000465591 CASP7P55210 303 aa27.81■■■□□ 2.04
LIME1-203ENST00000465591 LDHDQ86WU2 507 aa27.81■■■□□ 2.04
LIME1-203ENST00000465591 LINS1Q8NG48 757 aa27.81■■■□□ 2.04
LIME1-203ENST00000465591 EPS15P42566 896 aa27.8■■■□□ 2.04
LIME1-203ENST00000465591 TBC1D16Q8TBP0 767 aa27.79■■■□□ 2.04
LIME1-203ENST00000465591 GREM2Q9H772 168 aa27.79■■■□□ 2.04
LIME1-203ENST00000465591 C6orf229H3BNL8 230 aa27.78■■■□□ 2.04
LIME1-203ENST00000465591 RIMBP2O15034 1052 aa27.78■■■□□ 2.04
LIME1-203ENST00000465591 RAD17O75943 681 aa27.78■■■□□ 2.04
LIME1-203ENST00000465591 WASHC4Q2M389 1173 aa27.78■■■□□ 2.04
LIME1-203ENST00000465591 SLFN5Q08AF3 891 aa27.77■■■□□ 2.04
LIME1-203ENST00000465591 BEND3Q5T5X7 828 aa27.77■■■□□ 2.04
LIME1-203ENST00000465591 CDCA7LQ96GN5 454 aa27.77■■■□□ 2.04
LIME1-203ENST00000465591 PODXL2Q9NZ53 605 aa27.77■■■□□ 2.04
LIME1-203ENST00000465591 E9PSI1 815 aa27.76■■■□□ 2.03
LIME1-203ENST00000465591 ANKRD18AQ8IVF6 992 aa27.76■■■□□ 2.03
LIME1-203ENST00000465591 PLA2G12BQ9BX93 195 aa27.76■■■□□ 2.03
LIME1-203ENST00000465591 DBNDD1Q9H9R9 158 aa27.76■■■□□ 2.03
LIME1-203ENST00000465591 SCN9AQ15858 1988 aa27.76■■■□□ 2.03
LIME1-203ENST00000465591 RTL9Q8NET4 1388 aa27.75■■■□□ 2.03
LIME1-203ENST00000465591 LMOD1P29536 600 aaPredicted RBP27.75■■■□□ 2.03
LIME1-203ENST00000465591 CIAPIN1Q6FI81 312 aa27.75■■■□□ 2.03
LIME1-203ENST00000465591 PNMA8AQ86V59 439 aaPredicted RBP27.75■■■□□ 2.03
LIME1-203ENST00000465591 CLEC11AQ9Y240 323 aa27.75■■■□□ 2.03
LIME1-203ENST00000465591 PASKQ96RG2 1323 aa27.74■■■□□ 2.03
LIME1-203ENST00000465591 ITGBL1O95965 494 aaPredicted RBP27.74■■■□□ 2.03
LIME1-203ENST00000465591 GMPSP49915 693 aaPredicted RBP27.74■■■□□ 2.03
LIME1-203ENST00000465591 GPRC5DQ9NZD1 345 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms