RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 GRAPLQ8TC17 118 aaPredicted RBP16.55■□□□□ 0.24
ERGIC3-212ENST00000465298 TTLL11Q8NHH1 800 aa16.54■□□□□ 0.24
ERGIC3-212ENST00000465298 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
ERGIC3-212ENST00000465298 CSF1RP07333 972 aa16.53■□□□□ 0.24
ERGIC3-212ENST00000465298 CASP7P55210 303 aa16.53■□□□□ 0.24
ERGIC3-212ENST00000465298 RPS8P62241 208 aaKnown RBP16.53■□□□□ 0.24
ERGIC3-212ENST00000465298 CCDC57Q2TAC2 916 aa16.53■□□□□ 0.24
ERGIC3-212ENST00000465298 CCDC93Q567U6 631 aa16.53■□□□□ 0.24
ERGIC3-212ENST00000465298 SYNE4Q8N205 404 aa16.53■□□□□ 0.24
ERGIC3-212ENST00000465298 CLUAP1Q96AJ1 413 aa16.53■□□□□ 0.24
ERGIC3-212ENST00000465298 DDX19BQ9UMR2 479 aa16.53■□□□□ 0.24
ERGIC3-212ENST00000465298 ANKRD18BA2A2Z9 1011 aa16.52■□□□□ 0.24
ERGIC3-212ENST00000465298 PPEF1O14829 653 aaPredicted RBP16.52■□□□□ 0.24
ERGIC3-212ENST00000465298 IGHMBP2P38935 993 aaKnown RBP16.52■□□□□ 0.24
ERGIC3-212ENST00000465298 IFIT5Q13325 482 aaKnown RBP16.52■□□□□ 0.24
ERGIC3-212ENST00000465298 ANKRD18AQ8IVF6 992 aa16.52■□□□□ 0.24
ERGIC3-212ENST00000465298 SP8Q8IXZ3 490 aa16.52■□□□□ 0.24
ERGIC3-212ENST00000465298 NBPF7P0C2Y1 421 aaPredicted RBP16.51■□□□□ 0.23
ERGIC3-212ENST00000465298 ITPRIPQ8IWB1 547 aa16.51■□□□□ 0.23
ERGIC3-212ENST00000465298 SUPT20HQ8NEM7 779 aa16.51■□□□□ 0.23
ERGIC3-212ENST00000465298 VPS33BQ9H267 617 aa16.51■□□□□ 0.23
ERGIC3-212ENST00000465298 ATP6V0A2Q9Y487 856 aa16.51■□□□□ 0.23
ERGIC3-212ENST00000465298 TAF7LQ5H9L4 462 aa16.5■□□□□ 0.23
ERGIC3-212ENST00000465298 ARHGAP27Q6ZUM4 889 aa16.5■□□□□ 0.23
ERGIC3-212ENST00000465298 MPHOSPH8Q99549 860 aa16.5■□□□□ 0.23
ERGIC3-212ENST00000465298 CHMP3Q9Y3E7 222 aa16.5■□□□□ 0.23
ERGIC3-212ENST00000465298 ANKRD31Q8N7Z5 1873 aa16.5■□□□□ 0.23
ERGIC3-212ENST00000465298 LTBP3Q9NS15 1303 aa16.49■□□□□ 0.23
ERGIC3-212ENST00000465298 DLEC1Q9Y238 1755 aa16.49■□□□□ 0.23
ERGIC3-212ENST00000465298 C21orf2O43822 256 aa16.49■□□□□ 0.23
ERGIC3-212ENST00000465298 GNAI2P04899 355 aa16.49■□□□□ 0.23
ERGIC3-212ENST00000465298 YBX3P16989 372 aaKnown RBP eCLIP16.49■□□□□ 0.233e-16■■□□□ 11.5
ERGIC3-212ENST00000465298 RABL6Q3YEC7 729 aaPredicted RBP16.49■□□□□ 0.23
ERGIC3-212ENST00000465298 LMBR1LQ6UX01 489 aa16.49■□□□□ 0.23
ERGIC3-212ENST00000465298 TMEM57Q8N5G2 664 aa16.49■□□□□ 0.23
ERGIC3-212ENST00000465298 BSDC1Q9NW68 430 aaPredicted RBP16.49■□□□□ 0.23
ERGIC3-212ENST00000465298 ITGA6P23229 1130 aa16.48■□□□□ 0.23
ERGIC3-212ENST00000465298 FOXO4P98177 505 aa16.48■□□□□ 0.23
ERGIC3-212ENST00000465298 C3orf67Q6ZVT6 689 aa16.48■□□□□ 0.23
ERGIC3-212ENST00000465298 C7orf43Q8WVR3 580 aa16.48■□□□□ 0.23
ERGIC3-212ENST00000465298 JARID2Q92833 1246 aaPredicted RBP16.48■□□□□ 0.23
ERGIC3-212ENST00000465298 PSMD1Q99460 953 aa16.48■□□□□ 0.23
ERGIC3-212ENST00000465298 TAOK3Q9H2K8 898 aa16.48■□□□□ 0.23
ERGIC3-212ENST00000465298 FBXO3Q9UK99 471 aa16.48■□□□□ 0.23
ERGIC3-212ENST00000465298 N4BP2Q86UW6 1770 aaPredicted RBP16.48■□□□□ 0.23
ERGIC3-212ENST00000465298 KIAA1551Q9HCM1 1747 aa16.48■□□□□ 0.23
ERGIC3-212ENST00000465298 LAMB2P55268 1798 aa16.47■□□□□ 0.23
ERGIC3-212ENST00000465298 MVPQ14764 893 aaKnown RBP16.47■□□□□ 0.23
ERGIC3-212ENST00000465298 SUCLG2Q96I99 432 aa16.47■□□□□ 0.23
ERGIC3-212ENST00000465298 ANKRD2Q9GZV1 360 aa16.47■□□□□ 0.23
ERGIC3-212ENST00000465298 GREM2Q9H772 168 aa16.47■□□□□ 0.23
ERGIC3-212ENST00000465298 ZC3H4Q9UPT8 1303 aaKnown RBP16.46■□□□□ 0.23
ERGIC3-212ENST00000465298 LMNB1P20700 586 aa16.46■□□□□ 0.23
ERGIC3-212ENST00000465298 FKBP4Q02790 459 aaKnown RBP eCLIP16.46■□□□□ 0.23
ERGIC3-212ENST00000465298 AAMPQ13685 434 aa16.46■□□□□ 0.23
ERGIC3-212ENST00000465298 MPNDQ8N594 471 aa16.46■□□□□ 0.23
ERGIC3-212ENST00000465298 BICC1Q9H694 974 aaKnown RBP16.46■□□□□ 0.23
ERGIC3-212ENST00000465298 WWC3Q9ULE0 1092 aa16.46■□□□□ 0.23
ERGIC3-212ENST00000465298 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
ERGIC3-212ENST00000465298 FAM161AQ3B820 660 aa16.45■□□□□ 0.22
ERGIC3-212ENST00000465298 DPP8Q6V1X1 898 aaPredicted RBP16.45■□□□□ 0.22
ERGIC3-212ENST00000465298 CELF1Q92879 486 aaKnown RBP16.45■□□□□ 0.22
ERGIC3-212ENST00000465298 EYA3Q99504 573 aa16.45■□□□□ 0.22
ERGIC3-212ENST00000465298 MEIS3Q99687 375 aa16.45■□□□□ 0.22
ERGIC3-212ENST00000465298 TNRC6CQ9HCJ0 1690 aaKnown RBP16.45■□□□□ 0.22
ERGIC3-212ENST00000465298 DDX60Q8IY21 1712 aaKnown RBP16.45■□□□□ 0.22
ERGIC3-212ENST00000465298 BRCA1P38398 1863 aaKnown RBP16.44■□□□□ 0.22
ERGIC3-212ENST00000465298 ZBTB7BO15156 539 aaPredicted RBP16.44■□□□□ 0.22
ERGIC3-212ENST00000465298 MTX1Q13505 466 aa16.44■□□□□ 0.22
ERGIC3-212ENST00000465298 LDHAL6AQ6ZMR3 332 aa16.44■□□□□ 0.22
ERGIC3-212ENST00000465298 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
ERGIC3-212ENST00000465298 SEC31BQ9NQW1 1179 aa16.44■□□□□ 0.22
ERGIC3-212ENST00000465298 PODXL2Q9NZ53 605 aa16.44■□□□□ 0.22
ERGIC3-212ENST00000465298 ANKIB1Q9P2G1 1089 aa16.44■□□□□ 0.22
ERGIC3-212ENST00000465298 LRRFIP2Q9Y608 721 aaKnown RBP16.44■□□□□ 0.22
ERGIC3-212ENST00000465298 ARFGEF1Q9Y6D6 1849 aa16.44■□□□□ 0.22
ERGIC3-212ENST00000465298 COL11A2P13942 1736 aaPredicted RBP16.43■□□□□ 0.22
ERGIC3-212ENST00000465298 PANK1Q8TE04 598 aa16.43■□□□□ 0.22
ERGIC3-212ENST00000465298 RTFDC1Q9BY42 306 aaPredicted RBP16.43■□□□□ 0.22
ERGIC3-212ENST00000465298 ZNF219Q9P2Y4 722 aaPredicted RBP16.43■□□□□ 0.22
ERGIC3-212ENST00000465298 NSFL1CQ9UNZ2 370 aaKnown RBP16.43■□□□□ 0.22
ERGIC3-212ENST00000465298 XDHP47989 1333 aa16.43■□□□□ 0.22
ERGIC3-212ENST00000465298 RLBP1P12271 317 aa16.42■□□□□ 0.22
ERGIC3-212ENST00000465298 ANKRD44Q8N8A2 993 aa16.42■□□□□ 0.22
ERGIC3-212ENST00000465298 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
ERGIC3-212ENST00000465298 KAZALD1Q96I82 304 aa16.42■□□□□ 0.22
ERGIC3-212ENST00000465298 CNNM1Q9NRU3 951 aa16.42■□□□□ 0.22
ERGIC3-212ENST00000465298 LEMD3Q9Y2U8 911 aa16.42■□□□□ 0.22
ERGIC3-212ENST00000465298 MYH3P11055 1940 aa16.41■□□□□ 0.22
ERGIC3-212ENST00000465298 PLIN1O60240 522 aa16.41■□□□□ 0.22
ERGIC3-212ENST00000465298 HMMRO75330 724 aa16.41■□□□□ 0.22
ERGIC3-212ENST00000465298 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
ERGIC3-212ENST00000465298 ATP2B4P23634 1241 aa16.41■□□□□ 0.22
ERGIC3-212ENST00000465298 EPHA10Q5JZY3 1008 aa16.41■□□□□ 0.22
ERGIC3-212ENST00000465298 RPAP2Q8IXW5 612 aaPredicted RBP16.41■□□□□ 0.22
ERGIC3-212ENST00000465298 GGA1Q9UJY5 639 aa16.41■□□□□ 0.22
ERGIC3-212ENST00000465298 MROH5Q6ZUA9 1318 aa16.41■□□□□ 0.22
ERGIC3-212ENST00000465298 SRGAP3O43295 1099 aa16.4■□□□□ 0.22
ERGIC3-212ENST00000465298 ZC3H12CQ9C0D7 883 aaKnown RBP16.4■□□□□ 0.22
ERGIC3-212ENST00000465298 MINPP1Q9UNW1 487 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms