RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 CHMP3Q9Y3E7 222 aa16.7■□□□□ 0.26
ATF3-208ENST00000465155 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
ATF3-208ENST00000465155 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
ATF3-208ENST00000465155 SSH3Q8TE77 659 aa16.69■□□□□ 0.26
ATF3-208ENST00000465155 PARP3Q9Y6F1 533 aa16.69■□□□□ 0.26
ATF3-208ENST00000465155 POLA2Q14181 598 aa16.68■□□□□ 0.26
ATF3-208ENST00000465155 SLC10A5Q5PT55 438 aa16.68■□□□□ 0.26
ATF3-208ENST00000465155 CCDC85AQ96PX6 553 aaPredicted RBP16.68■□□□□ 0.26
ATF3-208ENST00000465155 KDM2BQ8NHM5 1336 aa16.68■□□□□ 0.26
ATF3-208ENST00000465155 TNRC6CQ9HCJ0 1690 aaKnown RBP16.68■□□□□ 0.26
ATF3-208ENST00000465155 PSDA5PKW4 1024 aaPredicted RBP16.67■□□□□ 0.26
ATF3-208ENST00000465155 CSF1RP07333 972 aa16.67■□□□□ 0.26
ATF3-208ENST00000465155 ST5P78524 1137 aa16.67■□□□□ 0.26
ATF3-208ENST00000465155 CENPQQ7L2Z9 268 aaPredicted RBP16.67■□□□□ 0.26
ATF3-208ENST00000465155 TTLL11Q8NHH1 800 aa16.67■□□□□ 0.26
ATF3-208ENST00000465155 CACNB1Q02641 598 aaPredicted RBP16.67■□□□□ 0.26
ATF3-208ENST00000465155 ZBTB7AO95365 584 aa16.66■□□□□ 0.26
ATF3-208ENST00000465155 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
ATF3-208ENST00000465155 NLRP3Q96P20 1036 aa16.66■□□□□ 0.26
ATF3-208ENST00000465155 C3orf67Q6ZVT6 689 aa16.65■□□□□ 0.26
ATF3-208ENST00000465155 GREM2Q9H772 168 aa16.65■□□□□ 0.26
ATF3-208ENST00000465155 ANKRD31Q8N7Z5 1873 aa16.65■□□□□ 0.26
ATF3-208ENST00000465155 RFX5P48382 616 aaPredicted RBP16.64■□□□□ 0.25
ATF3-208ENST00000465155 CCDC57Q2TAC2 916 aa16.64■□□□□ 0.25
ATF3-208ENST00000465155 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
ATF3-208ENST00000465155 KLHDC4Q8TBB5 520 aa16.64■□□□□ 0.25
ATF3-208ENST00000465155 GCC1Q96CN9 775 aa16.64■□□□□ 0.25
ATF3-208ENST00000465155 DCTPP1Q9H773 170 aa16.64■□□□□ 0.25
ATF3-208ENST00000465155 PA2G4Q9UQ80 394 aaKnown RBP16.64■□□□□ 0.25
ATF3-208ENST00000465155 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
ATF3-208ENST00000465155 RIC1Q4ADV7 1423 aa16.64■□□□□ 0.25
ATF3-208ENST00000465155 SURF6O75683 361 aaKnown RBP16.63■□□□□ 0.25
ATF3-208ENST00000465155 ITGA6P23229 1130 aa16.63■□□□□ 0.25
ATF3-208ENST00000465155 IFIT5Q13325 482 aaKnown RBP16.63■□□□□ 0.25
ATF3-208ENST00000465155 SF3B3Q15393 1217 aaKnown RBP16.63■□□□□ 0.25
ATF3-208ENST00000465155 SMC5Q8IY18 1101 aa16.63■□□□□ 0.25
ATF3-208ENST00000465155 MTFR1LQ9H019 292 aa16.63■□□□□ 0.25
ATF3-208ENST00000465155 EXOC6BQ9Y2D4 811 aa16.63■□□□□ 0.25
ATF3-208ENST00000465155 PTPN12Q05209 780 aaKnown RBP16.63■□□□□ 0.25
ATF3-208ENST00000465155 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
ATF3-208ENST00000465155 SPEF2Q9C093 1822 aa16.63■□□□□ 0.25
ATF3-208ENST00000465155 TAF1P21675 1872 aa16.62■□□□□ 0.25
ATF3-208ENST00000465155 ANKRD18BA2A2Z9 1011 aa16.62■□□□□ 0.25
ATF3-208ENST00000465155 ZNF594Q96JF6 807 aaPredicted RBP16.62■□□□□ 0.25
ATF3-208ENST00000465155 SIL1Q9H173 461 aa16.62■□□□□ 0.25
ATF3-208ENST00000465155 APBB1O00213 710 aa16.61■□□□□ 0.25
ATF3-208ENST00000465155 TAF7LQ5H9L4 462 aa16.61■□□□□ 0.25
ATF3-208ENST00000465155 COPRSQ9NQ92 184 aa16.61■□□□□ 0.25
ATF3-208ENST00000465155 SEC31BQ9NQW1 1179 aa16.61■□□□□ 0.25
ATF3-208ENST00000465155 NOP58Q9Y2X3 529 aaKnown RBP16.61■□□□□ 0.25
ATF3-208ENST00000465155 RTL9Q8NET4 1388 aa16.61■□□□□ 0.25
ATF3-208ENST00000465155 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
ATF3-208ENST00000465155 BRIP1Q9BX63 1249 aa16.6■□□□□ 0.25
ATF3-208ENST00000465155 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.25
ATF3-208ENST00000465155 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
ATF3-208ENST00000465155 COL4A1P02462 1669 aa16.59■□□□□ 0.25
ATF3-208ENST00000465155 POLD1P28340 1107 aa16.59■□□□□ 0.25
ATF3-208ENST00000465155 CRY2Q49AN0 593 aa16.59■□□□□ 0.25
ATF3-208ENST00000465155 ANKRD45Q5TZF3 282 aa16.59■□□□□ 0.25
ATF3-208ENST00000465155 COL11A2P13942 1736 aaPredicted RBP16.58■□□□□ 0.24
ATF3-208ENST00000465155 RAB11FIP3O75154 756 aa16.58■□□□□ 0.24
ATF3-208ENST00000465155 PDE6BP35913 854 aa16.58■□□□□ 0.24
ATF3-208ENST00000465155 DDX46Q7L014 1031 aaKnown RBP16.58■□□□□ 0.24
ATF3-208ENST00000465155 RPGRQ92834 1020 aaKnown RBP16.58■□□□□ 0.24
ATF3-208ENST00000465155 CDC5LQ99459 802 aaKnown RBP16.58■□□□□ 0.24
ATF3-208ENST00000465155 PDZRN3Q9UPQ7 1066 aa16.58■□□□□ 0.24
ATF3-208ENST00000465155 LRP5O75197 1615 aa16.57■□□□□ 0.24
ATF3-208ENST00000465155 KLRG2A4D1S0 409 aaPredicted RBP16.57■□□□□ 0.24
ATF3-208ENST00000465155 EYA2O00167 538 aa16.57■□□□□ 0.24
ATF3-208ENST00000465155 NUCB1Q02818 461 aa16.57■□□□□ 0.24
ATF3-208ENST00000465155 LRRC24Q50LG9 513 aa16.57■□□□□ 0.24
ATF3-208ENST00000465155 LDHAL6AQ6ZMR3 332 aa16.57■□□□□ 0.24
ATF3-208ENST00000465155 PUS3Q9BZE2 481 aaKnown RBP16.57■□□□□ 0.24
ATF3-208ENST00000465155 LRRCC1Q9C099 1032 aa16.57■□□□□ 0.24
ATF3-208ENST00000465155 BCL11AQ9H165 835 aa16.57■□□□□ 0.24
ATF3-208ENST00000465155 SMARCA5O60264 1052 aaPredicted RBP16.56■□□□□ 0.24
ATF3-208ENST00000465155 IGHMBP2P38935 993 aaKnown RBP16.56■□□□□ 0.24
ATF3-208ENST00000465155 ERC1Q8IUD2 1116 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 ANKRD18AQ8IVF6 992 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 ZBTB47Q9UFB7 747 aaPredicted RBP16.56■□□□□ 0.24
ATF3-208ENST00000465155 C10orf71Q711Q0 1435 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 CIAO1O76071 339 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 ATG9AQ7Z3C6 839 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 CHD1LQ86WJ1 897 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 RHPN1Q8TCX5 695 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 CELF1Q92879 486 aaKnown RBP16.56■□□□□ 0.24
ATF3-208ENST00000465155 KIF1BPQ96EK5 621 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 RBM17Q96I25 401 aaKnown RBP16.56■□□□□ 0.24
ATF3-208ENST00000465155 MPHOSPH8Q99549 860 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 LNPKQ9C0E8 428 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 CNNM1Q9NRU3 951 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 FBXO3Q9UK99 471 aa16.56■□□□□ 0.24
ATF3-208ENST00000465155 SASH1O94885 1247 aa16.55■□□□□ 0.24
ATF3-208ENST00000465155 IL15P40933 162 aaPredicted RBP16.55■□□□□ 0.24
ATF3-208ENST00000465155 SKAP1Q86WV1 359 aa16.55■□□□□ 0.24
ATF3-208ENST00000465155 SGIP1Q9BQI5 828 aa16.55■□□□□ 0.24
ATF3-208ENST00000465155 IL1RAPL2Q9NP60 686 aa16.55■□□□□ 0.24
ATF3-208ENST00000465155 SRGNP10124 158 aa16.54■□□□□ 0.24
ATF3-208ENST00000465155 GRAPQ13588 217 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms