RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 PRKRIP1Q9H875 184 aaPredicted RBP29.61■■■□□ 2.33
USP42-205ENST00000465073 LTBP1Q14766 1721 aa29.61■■■□□ 2.33
USP42-205ENST00000465073 DEFB115Q30KQ5 88 aa29.61■■■□□ 2.33
USP42-205ENST00000465073 ISCA1Q9BUE6 129 aa29.61■■■□□ 2.33
USP42-205ENST00000465073 GPRC5DQ9NZD1 345 aa29.61■■■□□ 2.33
USP42-205ENST00000465073 KIAA2012Q0VF49 1180 aa29.6■■■□□ 2.33
USP42-205ENST00000465073 ADARB2Q9NS39 739 aaKnown RBP29.59■■■□□ 2.33
USP42-205ENST00000465073 MBIPQ9NS73 344 aa29.59■■■□□ 2.33
USP42-205ENST00000465073 FOXN1O15353 648 aa29.58■■■□□ 2.33
USP42-205ENST00000465073 AIDAQ96BJ3 306 aa29.58■■■□□ 2.33
USP42-205ENST00000465073 ABT1Q9ULW3 272 aaKnown RBP29.58■■■□□ 2.33
USP42-205ENST00000465073 LAMB2P55268 1798 aa29.57■■■□□ 2.32
USP42-205ENST00000465073 ATP5J2-PTCD1G3V325 749 aa29.57■■■□□ 2.32
USP42-205ENST00000465073 CAPN15O75808 1086 aa29.57■■■□□ 2.32
USP42-205ENST00000465073 FAM89AQ96GI7 184 aa29.57■■■□□ 2.32
USP42-205ENST00000465073 ZNF853P0CG23 659 aa29.56■■■□□ 2.32
USP42-205ENST00000465073 TRIM28Q13263 835 aaKnown RBP29.56■■■□□ 2.32
USP42-205ENST00000465073 TNIP1Q15025 636 aa29.56■■■□□ 2.32
USP42-205ENST00000465073 SF3B3Q15393 1217 aaKnown RBP29.56■■■□□ 2.32
USP42-205ENST00000465073 CIAPIN1Q6FI81 312 aa29.56■■■□□ 2.32
USP42-205ENST00000465073 ZNF428Q96B54 188 aa29.56■■■□□ 2.32
USP42-205ENST00000465073 GMPSP49915 693 aaPredicted RBP29.55■■■□□ 2.32
USP42-205ENST00000465073 CALD1Q05682 793 aaKnown RBP29.55■■■□□ 2.32
USP42-205ENST00000465073 PRDM10Q9NQV6 1147 aa29.55■■■□□ 2.32
USP42-205ENST00000465073 IFT57Q9NWB7 429 aa29.55■■■□□ 2.32
USP42-205ENST00000465073 WBP1LQ9NX94 342 aa29.55■■■□□ 2.32
USP42-205ENST00000465073 CDHR2Q9BYE9 1310 aa29.55■■■□□ 2.32
USP42-205ENST00000465073 APAF1O14727 1248 aa29.54■■■□□ 2.32
USP42-205ENST00000465073 CTCFP49711 727 aaPredicted RBP29.54■■■□□ 2.32
USP42-205ENST00000465073 WDR33Q9C0J8 1336 aaKnown RBP29.53■■■□□ 2.32
USP42-205ENST00000465073 RAD17O75943 681 aa29.53■■■□□ 2.32
USP42-205ENST00000465073 GNAI1P63096 354 aa29.53■■■□□ 2.32
USP42-205ENST00000465073 FMR1Q06787 632 aaKnown RBP eCLIP29.52■■■□□ 2.32
USP42-205ENST00000465073 GOLGA2Q08379 1002 aa29.51■■■□□ 2.31
USP42-205ENST00000465073 BCL2L13Q9BXK5 485 aa29.51■■■□□ 2.31
USP42-205ENST00000465073 TRAF5O00463 557 aa29.5■■■□□ 2.31
USP42-205ENST00000465073 CST9Q5W186 159 aa29.5■■■□□ 2.31
USP42-205ENST00000465073 RIC3Q7Z5B4 369 aa29.5■■■□□ 2.31
USP42-205ENST00000465073 CELF1Q92879 486 aaKnown RBP29.5■■■□□ 2.31
USP42-205ENST00000465073 IRS4O14654 1257 aaPredicted RBP29.49■■■□□ 2.31
USP42-205ENST00000465073 MAP2K1Q02750 393 aaPredicted RBP29.49■■■□□ 2.31
USP42-205ENST00000465073 PGAP2Q9UHJ9 254 aa29.49■■■□□ 2.31
USP42-205ENST00000465073 NSFL1CQ9UNZ2 370 aaKnown RBP29.49■■■□□ 2.31
USP42-205ENST00000465073 WASHC4Q2M389 1173 aa29.48■■■□□ 2.31
USP42-205ENST00000465073 RTL5Q5HYW3 569 aaPredicted RBP29.48■■■□□ 2.31
USP42-205ENST00000465073 ZC3H15Q8WU90 426 aaKnown RBP29.48■■■□□ 2.31
USP42-205ENST00000465073 DDX60Q8IY21 1712 aaKnown RBP29.48■■■□□ 2.31
USP42-205ENST00000465073 YDJCA8MPS7 323 aa29.48■■■□□ 2.31
USP42-205ENST00000465073 HSP90B1P14625 803 aaKnown RBP29.48■■■□□ 2.31
USP42-205ENST00000465073 ELL2O00472 640 aaPredicted RBP29.47■■■□□ 2.31
USP42-205ENST00000465073 ECE1P42892 770 aa29.47■■■□□ 2.31
USP42-205ENST00000465073 ZBTB38Q8NAP3 1195 aaPredicted RBP29.47■■■□□ 2.31
USP42-205ENST00000465073 CHMP4AQ9BY43 222 aa29.47■■■□□ 2.31
USP42-205ENST00000465073 DUOX1Q9NRD9 1551 aa29.47■■■□□ 2.31
USP42-205ENST00000465073 TAF1P21675 1872 aa29.47■■■□□ 2.31
USP42-205ENST00000465073 PHAXQ9H814 394 aaKnown RBP29.46■■■□□ 2.31
USP42-205ENST00000465073 CNOT7Q9UIV1 285 aaKnown RBP29.46■■■□□ 2.31
USP42-205ENST00000465073 LRRC37AA6NMS7 1700 aa29.45■■■□□ 2.31
USP42-205ENST00000465073 RPS8P62241 208 aaKnown RBP29.45■■■□□ 2.31
USP42-205ENST00000465073 CAPNS2Q96L46 248 aa29.45■■■□□ 2.31
USP42-205ENST00000465073 TLL2Q9Y6L7 1015 aa29.45■■■□□ 2.31
USP42-205ENST00000465073 C6orf229H3BNL8 230 aa29.44■■■□□ 2.3
USP42-205ENST00000465073 H7C1D1 291 aa29.44■■■□□ 2.3
USP42-205ENST00000465073 GPSM2P81274 684 aa29.44■■■□□ 2.3
USP42-205ENST00000465073 POLLQ9UGP5 575 aa29.44■■■□□ 2.3
USP42-205ENST00000465073 LBX1P52954 281 aa29.43■■■□□ 2.3
USP42-205ENST00000465073 HIRAP54198 1017 aaPredicted RBP29.43■■■□□ 2.3
USP42-205ENST00000465073 PAXIP1Q6ZW49 1069 aaPredicted RBP29.43■■■□□ 2.3
USP42-205ENST00000465073 C8orf58Q8NAV2 365 aa29.43■■■□□ 2.3
USP42-205ENST00000465073 CCDC191Q8NCU4 936 aa29.43■■■□□ 2.3
USP42-205ENST00000465073 DPF2Q92785 391 aa29.43■■■□□ 2.3
USP42-205ENST00000465073 EYA3Q99504 573 aa29.43■■■□□ 2.3
USP42-205ENST00000465073 GLIS2Q9BZE0 524 aaPredicted RBP29.42■■■□□ 2.3
USP42-205ENST00000465073 TRPM4Q8TD43 1214 aa29.42■■■□□ 2.3
USP42-205ENST00000465073 GPR101Q96P66 508 aaPredicted RBP29.42■■■□□ 2.3
USP42-205ENST00000465073 MYD88Q99836 296 aa29.42■■■□□ 2.3
USP42-205ENST00000465073 DBNDD1Q9H9R9 158 aa29.42■■■□□ 2.3
USP42-205ENST00000465073 TRPM7Q96QT4 1865 aa29.41■■■□□ 2.3
USP42-205ENST00000465073 RIMBP2O15034 1052 aa29.41■■■□□ 2.3
USP42-205ENST00000465073 CELF2O95319 508 aaKnown RBP29.41■■■□□ 2.3
USP42-205ENST00000465073 CCDC30Q5VVM6 783 aa29.41■■■□□ 2.3
USP42-205ENST00000465073 CYP4F22Q6NT55 531 aa29.41■■■□□ 2.3
USP42-205ENST00000465073 CDC37L1Q7L3B6 337 aa29.41■■■□□ 2.3
USP42-205ENST00000465073 MICALL2Q8IY33 904 aa29.41■■■□□ 2.3
USP42-205ENST00000465073 PSMD14O00487 310 aa29.4■■■□□ 2.3
USP42-205ENST00000465073 DDX58O95786 925 aaKnown RBP29.4■■■□□ 2.3
USP42-205ENST00000465073 PCCAP05165 728 aaPredicted RBP29.4■■■□□ 2.3
USP42-205ENST00000465073 TBC1D16Q8TBP0 767 aa29.4■■■□□ 2.3
USP42-205ENST00000465073 ZBTB12Q9Y330 459 aaPredicted RBP29.4■■■□□ 2.3
USP42-205ENST00000465073 HSPA8P11142 646 aaKnown RBP29.39■■■□□ 2.3
USP42-205ENST00000465073 SHTN1A0MZ66 631 aa29.38■■■□□ 2.29
USP42-205ENST00000465073 RPS12P25398 132 aaKnown RBP29.38■■■□□ 2.29
USP42-205ENST00000465073 GRM1Q13255 1194 aa29.38■■■□□ 2.29
USP42-205ENST00000465073 SAPCD2Q86UD0 394 aa29.38■■■□□ 2.29
USP42-205ENST00000465073 METTL22Q9BUU2 404 aaPredicted RBP29.38■■■□□ 2.29
USP42-205ENST00000465073 CWC25Q9NXE8 425 aaPredicted RBP29.38■■■□□ 2.29
USP42-205ENST00000465073 PODXL2Q9NZ53 605 aa29.38■■■□□ 2.29
USP42-205ENST00000465073 ECE2O60344 883 aa29.37■■■□□ 2.29
USP42-205ENST00000465073 CCDC152Q4G0S7 254 aa29.37■■■□□ 2.29
USP42-205ENST00000465073 HHIPL1Q96JK4 782 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms