RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 DPP8Q6V1X1 898 aaPredicted RBP33.28■■■□□ 2.92
U2AF1-206ENST00000464750 GPC2Q8N158 579 aa33.28■■■□□ 2.92
U2AF1-206ENST00000464750 DNAJC5GQ8N7S2 189 aa33.28■■■□□ 2.92
U2AF1-206ENST00000464750 ZBTB38Q8NAP3 1195 aaPredicted RBP33.28■■■□□ 2.92
U2AF1-206ENST00000464750 COL4A1P02462 1669 aa33.28■■■□□ 2.92
U2AF1-206ENST00000464750 AOC3Q16853 763 aa33.27■■■□□ 2.92
U2AF1-206ENST00000464750 CHADLQ6NUI6 762 aa33.27■■■□□ 2.92
U2AF1-206ENST00000464750 NIM1KQ8IY84 436 aa33.27■■■□□ 2.92
U2AF1-206ENST00000464750 FAM9BQ8IZU0 186 aa33.27■■■□□ 2.92
U2AF1-206ENST00000464750 SUPT20HQ8NEM7 779 aa33.27■■■□□ 2.92
U2AF1-206ENST00000464750 METTL22Q9BUU2 404 aaPredicted RBP33.27■■■□□ 2.92
U2AF1-206ENST00000464750 TMC4Q7Z404 712 aa33.26■■■□□ 2.91
U2AF1-206ENST00000464750 WDR63Q8IWG1 891 aa33.26■■■□□ 2.91
U2AF1-206ENST00000464750 MPNDQ8N594 471 aa33.26■■■□□ 2.91
U2AF1-206ENST00000464750 CCDC191Q8NCU4 936 aa33.26■■■□□ 2.91
U2AF1-206ENST00000464750 RTFDC1Q9BY42 306 aaPredicted RBP33.26■■■□□ 2.91
U2AF1-206ENST00000464750 HACL1Q9UJ83 578 aa33.26■■■□□ 2.91
U2AF1-206ENST00000464750 MAP3K2Q9Y2U5 619 aa33.26■■■□□ 2.91
U2AF1-206ENST00000464750 DUOX1Q9NRD9 1551 aa33.26■■■□□ 2.91
U2AF1-206ENST00000464750 CACNA1FO60840 1977 aa33.25■■■□□ 2.91
U2AF1-206ENST00000464750 CWC25Q9NXE8 425 aaPredicted RBP33.25■■■□□ 2.91
U2AF1-206ENST00000464750 ADAMTSL1Q8N6G6 1762 aa33.24■■■□□ 2.91
U2AF1-206ENST00000464750 CELF1Q92879 486 aaKnown RBP33.24■■■□□ 2.91
U2AF1-206ENST00000464750 VPS33BQ9H267 617 aa33.24■■■□□ 2.91
U2AF1-206ENST00000464750 GJA3Q9Y6H8 435 aa33.24■■■□□ 2.91
U2AF1-206ENST00000464750 PCCAP05165 728 aaPredicted RBP33.23■■■□□ 2.91
U2AF1-206ENST00000464750 KSR2Q6VAB6 950 aa33.23■■■□□ 2.91
U2AF1-206ENST00000464750 LTBP1Q14766 1721 aa33.22■■■□□ 2.91
U2AF1-206ENST00000464750 PI4KAP2A4QPH2 592 aa33.22■■■□□ 2.91
U2AF1-206ENST00000464750 EPHX2P34913 555 aa33.22■■■□□ 2.91
U2AF1-206ENST00000464750 LDHDQ86WU2 507 aa33.22■■■□□ 2.91
U2AF1-206ENST00000464750 PI4KAP1Q8N8J0 262 aa33.22■■■□□ 2.91
U2AF1-206ENST00000464750 HSP90B1P14625 803 aaKnown RBP33.21■■■□□ 2.91
U2AF1-206ENST00000464750 EAPPQ56P03 285 aaPredicted RBP33.21■■■□□ 2.91
U2AF1-206ENST00000464750 G2E3Q7L622 706 aa33.2■■■□□ 2.91
U2AF1-206ENST00000464750 SLC4A2P04920 1241 aa33.19■■■□□ 2.9
U2AF1-206ENST00000464750 JARID2Q92833 1246 aaPredicted RBP33.19■■■□□ 2.9
U2AF1-206ENST00000464750 KLRG1Q96E93 195 aa33.19■■■□□ 2.9
U2AF1-206ENST00000464750 MYH3P11055 1940 aa33.18■■■□□ 2.9
U2AF1-206ENST00000464750 KIAA2012Q0VF49 1180 aa33.18■■■□□ 2.9
U2AF1-206ENST00000464750 IGKV5-2P06315 115 aa33.17■■■□□ 2.9
U2AF1-206ENST00000464750 NEXNQ0ZGT2 675 aa33.17■■■□□ 2.9
U2AF1-206ENST00000464750 LMOD1P29536 600 aaPredicted RBP33.16■■■□□ 2.9
U2AF1-206ENST00000464750 EXOSC9Q06265 439 aaKnown RBP33.16■■■□□ 2.9
U2AF1-206ENST00000464750 ZNRF3Q9ULT6 936 aa33.16■■■□□ 2.9
U2AF1-206ENST00000464750 PDE8AO60658 829 aa33.15■■■□□ 2.9
U2AF1-206ENST00000464750 SCNN1DP51172 638 aa33.15■■■□□ 2.9
U2AF1-206ENST00000464750 PNMA8AQ86V59 439 aaPredicted RBP33.15■■■□□ 2.9
U2AF1-206ENST00000464750 SPINK5Q9NQ38 1064 aaPredicted RBP33.15■■■□□ 2.9
U2AF1-206ENST00000464750 CDHR2Q9BYE9 1310 aa33.14■■■□□ 2.9
U2AF1-206ENST00000464750 FLIIQ13045 1269 aa33.14■■■□□ 2.9
U2AF1-206ENST00000464750 CCDC152Q4G0S7 254 aa33.14■■■□□ 2.9
U2AF1-206ENST00000464750 SEC31BQ9NQW1 1179 aa33.14■■■□□ 2.9
U2AF1-206ENST00000464750 NSFL1CQ9UNZ2 370 aaKnown RBP33.14■■■□□ 2.9
U2AF1-206ENST00000464750 CLEC11AQ9Y240 323 aa33.14■■■□□ 2.9
U2AF1-206ENST00000464750 VAMP4O75379 141 aa33.13■■■□□ 2.89
U2AF1-206ENST00000464750 RPS8P62241 208 aaKnown RBP33.13■■■□□ 2.89
U2AF1-206ENST00000464750 CWF19L2Q2TBE0 894 aaKnown RBP33.12■■■□□ 2.89
U2AF1-206ENST00000464750 CCDC85AQ96PX6 553 aaPredicted RBP33.12■■■□□ 2.89
U2AF1-206ENST00000464750 NEURL1BA8MQ27 555 aa33.11■■■□□ 2.89
U2AF1-206ENST00000464750 GPSM2P81274 684 aa33.11■■■□□ 2.89
U2AF1-206ENST00000464750 CXCL9Q07325 125 aa33.11■■■□□ 2.89
U2AF1-206ENST00000464750 MYH16Q9H6N6 1097 aa33.11■■■□□ 2.89
U2AF1-206ENST00000464750 FKBP5Q13451 457 aaPredicted RBP33.1■■■□□ 2.89
U2AF1-206ENST00000464750 SPEF2Q9C093 1822 aa33.09■■■□□ 2.89
U2AF1-206ENST00000464750 PASKQ96RG2 1323 aa33.09■■■□□ 2.89
U2AF1-206ENST00000464750 EPS15P42566 896 aa33.09■■■□□ 2.89
U2AF1-206ENST00000464750 C6orf229H3BNL8 230 aa33.08■■■□□ 2.89
U2AF1-206ENST00000464750 CTSWP56202 376 aa33.08■■■□□ 2.89
U2AF1-206ENST00000464750 CIAPIN1Q6FI81 312 aa33.08■■■□□ 2.89
U2AF1-206ENST00000464750 WASHC4Q2M389 1173 aa33.07■■■□□ 2.88
U2AF1-206ENST00000464750 JMYQ8N9B5 988 aa33.07■■■□□ 2.88
U2AF1-206ENST00000464750 CREBZFQ9NS37 354 aa33.07■■■□□ 2.88
U2AF1-206ENST00000464750 POLLQ9UGP5 575 aa33.07■■■□□ 2.88
U2AF1-206ENST00000464750 RAD17O75943 681 aa33.06■■■□□ 2.88
U2AF1-206ENST00000464750 MAP1SQ66K74 1059 aaPredicted RBP33.06■■■□□ 2.88
U2AF1-206ENST00000464750 DNAAF4Q8WXU2 420 aa33.06■■■□□ 2.88
U2AF1-206ENST00000464750 YDJCA8MPS7 323 aa33.05■■■□□ 2.88
U2AF1-206ENST00000464750 ITGBL1O95965 494 aaPredicted RBP33.05■■■□□ 2.88
U2AF1-206ENST00000464750 GPRC5DQ9NZD1 345 aa33.05■■■□□ 2.88
U2AF1-206ENST00000464750 RIMBP2O15034 1052 aa33.04■■■□□ 2.88
U2AF1-206ENST00000464750 GMPSP49915 693 aaPredicted RBP33.04■■■□□ 2.88
U2AF1-206ENST00000464750 TNIP1Q15025 636 aa33.04■■■□□ 2.88
U2AF1-206ENST00000464750 UBE3BQ7Z3V4 1068 aa33.04■■■□□ 2.88
U2AF1-206ENST00000464750 TBC1D16Q8TBP0 767 aa33.04■■■□□ 2.88
U2AF1-206ENST00000464750 EYA3Q99504 573 aa33.04■■■□□ 2.88
U2AF1-206ENST00000464750 ZNF521Q96K83 1311 aa33.03■■■□□ 2.88
U2AF1-206ENST00000464750 ANKRD18AQ8IVF6 992 aa33.03■■■□□ 2.88
U2AF1-206ENST00000464750 CNTROBQ8N137 903 aa33.03■■■□□ 2.88
U2AF1-206ENST00000464750 GPR101Q96P66 508 aaPredicted RBP33.03■■■□□ 2.88
U2AF1-206ENST00000464750 DBNDD1Q9H9R9 158 aa33.03■■■□□ 2.88
U2AF1-206ENST00000464750 PODXL2Q9NZ53 605 aa33.03■■■□□ 2.88
U2AF1-206ENST00000464750 H7C1W4 665 aa33.02■■■□□ 2.88
U2AF1-206ENST00000464750 GCKRQ14397 625 aa33.02■■■□□ 2.88
U2AF1-206ENST00000464750 USP50Q70EL3 339 aaPredicted RBP33.02■■■□□ 2.88
U2AF1-206ENST00000464750 TTLL11Q8NHH1 800 aa33.01■■■□□ 2.87
U2AF1-206ENST00000464750 BCL2L13Q9BXK5 485 aa33.01■■■□□ 2.87
U2AF1-206ENST00000464750 ADARB2Q9NS39 739 aaKnown RBP33.01■■■□□ 2.87
U2AF1-206ENST00000464750 ANKIB1Q9P2G1 1089 aa33.01■■■□□ 2.87
U2AF1-206ENST00000464750 UFL1O94874 794 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms