RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 RUFY3Q7L099 469 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 DBNDD2Q9BQY9 259 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 SLC26A6Q9BXS9 759 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 SLC12A7Q9Y666 1083 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 CBFA2T2O43439 604 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 JAK2O60674 1132 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 PDIA4P13667 645 aaKnown RBP10.54□□□□□ -0.72
HPS4-208ENST00000464362 IARSP41252 1262 aaKnown RBP10.54□□□□□ -0.72
HPS4-208ENST00000464362 DNA2P51530 1060 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 MCMDC2Q4G0Z9 681 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 ZFP91Q96JP5 570 aaPredicted RBP10.54□□□□□ -0.72
HPS4-208ENST00000464362 AKAP2Q9Y2D5 859 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 NPHP3Q7Z494 1330 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 ZFYVE9O95405 1425 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 A0A1B0GVL5 298 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 TMCO3Q6UWJ1 677 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 IL17REQ8NFR9 667 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 BBXQ8WY36 941 aaPredicted RBP10.54□□□□□ -0.72
HPS4-208ENST00000464362 MAGEC2Q9UBF1 373 aaPredicted RBP10.54□□□□□ -0.72
HPS4-208ENST00000464362 TTC21AQ8NDW8 1320 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 ADCY10Q96PN6 1610 aa10.54□□□□□ -0.72
HPS4-208ENST00000464362 CCDC66A2RUB6 948 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 BRD1O95696 1058 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 STARD3NLO95772 234 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 GCP02774 474 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 SNW1Q13573 536 aaKnown RBP10.53□□□□□ -0.72
HPS4-208ENST00000464362 TMEM67Q5HYA8 995 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 AKAP4Q5JQC9 854 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 CCDC102AQ96A19 550 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 HMG20BQ9P0W2 317 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 MAP3K5Q99683 1374 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 CCP110O43303 1012 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 ALDH1L1O75891 902 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 PTH1RQ03431 593 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 CDC37L1Q7L3B6 337 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 DHX37Q8IY37 1157 aaKnown RBP10.53□□□□□ -0.72
HPS4-208ENST00000464362 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 PRIMPOLQ96LW4 560 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 NSFL1CQ9UNZ2 370 aaKnown RBP10.53□□□□□ -0.72
HPS4-208ENST00000464362 FSD2A1L4K1 749 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 PTPDC1A2A3K4 754 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 EPB41L2O43491 1005 aaKnown RBP10.53□□□□□ -0.72
HPS4-208ENST00000464362 KIF4BQ2VIQ3 1234 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 TANGO6Q9C0B7 1094 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 ATP7AQ04656 1500 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 ABCC2Q92887 1545 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 CTAGE5O15320 804 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 METAP2P50579 478 aaKnown RBP eCLIP10.53□□□□□ -0.72
HPS4-208ENST00000464362 NBPF6Q5VWK0 638 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 CDK5RAP3Q96JB5 506 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 NBPF4Q96M43 638 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 DNAI1Q9UI46 699 aa10.53□□□□□ -0.72
HPS4-208ENST00000464362 EPS15P42566 896 aa10.52□□□□□ -0.73
HPS4-208ENST00000464362 ENOX2Q16206 610 aaKnown RBP10.52□□□□□ -0.73
HPS4-208ENST00000464362 ZNF594Q96JF6 807 aaPredicted RBP10.52□□□□□ -0.73
HPS4-208ENST00000464362 GNL3LQ9NVN8 582 aaKnown RBP10.52□□□□□ -0.73
HPS4-208ENST00000464362 RAD50Q92878 1312 aa10.52□□□□□ -0.73
HPS4-208ENST00000464362 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.52□□□□□ -0.73
HPS4-208ENST00000464362 SUCLG2Q96I99 432 aa10.52□□□□□ -0.73
HPS4-208ENST00000464362 DEF6Q9H4E7 631 aa10.52□□□□□ -0.73
HPS4-208ENST00000464362 SLC27A2O14975 620 aa10.52□□□□□ -0.73
HPS4-208ENST00000464362 SYKP43405 635 aa10.52□□□□□ -0.73
HPS4-208ENST00000464362 GNG11P61952 73 aa10.52□□□□□ -0.73
HPS4-208ENST00000464362 ORAI2Q96SN7 254 aa10.52□□□□□ -0.73
HPS4-208ENST00000464362 PAG1Q9NWQ8 432 aa10.52□□□□□ -0.73
HPS4-208ENST00000464362 TTC41PQ6P2S7 1318 aa10.52□□□□□ -0.73
HPS4-208ENST00000464362 IGHMBP2P38935 993 aaKnown RBP10.51□□□□□ -0.73
HPS4-208ENST00000464362 AFMP43652 599 aa10.51□□□□□ -0.73
HPS4-208ENST00000464362 EIF5P55010 431 aaKnown RBP10.51□□□□□ -0.73
HPS4-208ENST00000464362 SLC9C2Q5TAH2 1124 aa10.51□□□□□ -0.73
HPS4-208ENST00000464362 MRPS27Q92552 414 aaKnown RBP10.51□□□□□ -0.73
HPS4-208ENST00000464362 ALG1Q9BT22 464 aa10.51□□□□□ -0.73
HPS4-208ENST00000464362 ZSCAN16Q9H4T2 348 aaPredicted RBP10.51□□□□□ -0.73
HPS4-208ENST00000464362 DACH1Q9UI36 760 aa10.51□□□□□ -0.73
HPS4-208ENST00000464362 NCOA7Q8NI08 942 aa10.51□□□□□ -0.73
HPS4-208ENST00000464362 SEC62Q99442 399 aaKnown RBP10.51□□□□□ -0.73
HPS4-208ENST00000464362 ZNHIT6Q9NWK9 470 aaKnown RBP10.51□□□□□ -0.73
HPS4-208ENST00000464362 HSPA4P34932 840 aa10.51□□□□□ -0.73
HPS4-208ENST00000464362 MAP3K12Q12852 859 aa10.51□□□□□ -0.73
HPS4-208ENST00000464362 ME3Q16798 604 aa10.51□□□□□ -0.73
HPS4-208ENST00000464362 SAMD9LQ8IVG5 1584 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 PRC1O43663 620 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 GTF2F1P35269 517 aaKnown RBP eCLIP10.5□□□□□ -0.73
HPS4-208ENST00000464362 USP5P45974 858 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 UBASH3AP57075 661 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 ADCK5Q3MIX3 580 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 NOM1Q5C9Z4 860 aaKnown RBP10.5□□□□□ -0.73
HPS4-208ENST00000464362 ACBD3Q9H3P7 528 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 CENPHQ9H3R5 247 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 A0A087WWV3 80 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 ANKRD18BA2A2Z9 1011 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 RNMTO43148 476 aaKnown RBP10.5□□□□□ -0.73
HPS4-208ENST00000464362 LIG1P18858 919 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 IFNKQ9P0W0 207 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 ADAMTS2O95450 1211 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 KRT18P05783 430 aaKnown RBP10.5□□□□□ -0.73
HPS4-208ENST00000464362 HS1BP3Q53T59 392 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 POGZQ7Z3K3 1410 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 KDM5DQ9BY66 1539 aa10.5□□□□□ -0.73
HPS4-208ENST00000464362 SSRP1Q08945 709 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms