RNA–Protein interactions for RNA: ENST00000464225.5

CHKB-203, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-203ENST00000464225 EPHX2P34913 555 aa12.98□□□□□ -0.33
CHKB-203ENST00000464225 SF3B3Q15393 1217 aaKnown RBP12.98□□□□□ -0.33
CHKB-203ENST00000464225 EAPPQ56P03 285 aaPredicted RBP12.98□□□□□ -0.33
CHKB-203ENST00000464225 DPP8Q6V1X1 898 aaPredicted RBP12.98□□□□□ -0.33
CHKB-203ENST00000464225 MYD88Q99836 296 aa12.98□□□□□ -0.33
CHKB-203ENST00000464225 GJA3Q9Y6H8 435 aa12.98□□□□□ -0.33
CHKB-203ENST00000464225 ADAMTSL1Q8N6G6 1762 aa12.98□□□□□ -0.33
CHKB-203ENST00000464225 LTBP1Q14766 1721 aa12.98□□□□□ -0.33
CHKB-203ENST00000464225 DUOX1Q9NRD9 1551 aa12.98□□□□□ -0.33
CHKB-203ENST00000464225 IL16Q14005 1332 aa12.97□□□□□ -0.33
CHKB-203ENST00000464225 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
CHKB-203ENST00000464225 MPNDQ8N594 471 aa12.97□□□□□ -0.33
CHKB-203ENST00000464225 JMYQ8N9B5 988 aa12.97□□□□□ -0.33
CHKB-203ENST00000464225 ZBTB38Q8NAP3 1195 aaPredicted RBP12.97□□□□□ -0.33
CHKB-203ENST00000464225 SUPT20HQ8NEM7 779 aa12.97□□□□□ -0.33
CHKB-203ENST00000464225 CELF1Q92879 486 aaKnown RBP12.97□□□□□ -0.33
CHKB-203ENST00000464225 CHMP4AQ9BY43 222 aa12.97□□□□□ -0.33
CHKB-203ENST00000464225 VPS33BQ9H267 617 aa12.97□□□□□ -0.33
CHKB-203ENST00000464225 DDX58O95786 925 aaKnown RBP12.96□□□□□ -0.33
CHKB-203ENST00000464225 SCNN1DP51172 638 aa12.96□□□□□ -0.33
CHKB-203ENST00000464225 TWISTNBQ3B726 338 aaPredicted RBP12.96□□□□□ -0.33
CHKB-203ENST00000464225 TMC4Q7Z404 712 aa12.96□□□□□ -0.33
CHKB-203ENST00000464225 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
CHKB-203ENST00000464225 METTL22Q9BUU2 404 aaPredicted RBP12.96□□□□□ -0.33
CHKB-203ENST00000464225 PASKQ96RG2 1323 aa12.95□□□□□ -0.34
CHKB-203ENST00000464225 FANCIQ9NVI1 1328 aa12.95□□□□□ -0.34
CHKB-203ENST00000464225 KIAA2012Q0VF49 1180 aa12.95□□□□□ -0.34
CHKB-203ENST00000464225 STK31Q9BXU1 1019 aa12.95□□□□□ -0.34
CHKB-203ENST00000464225 CWC25Q9NXE8 425 aaPredicted RBP12.95□□□□□ -0.34
CHKB-203ENST00000464225 ZNRF3Q9ULT6 936 aa12.95□□□□□ -0.34
CHKB-203ENST00000464225 MAP3K2Q9Y2U5 619 aa12.95□□□□□ -0.34
CHKB-203ENST00000464225 SALL2Q9Y467 1007 aaPredicted RBP12.95□□□□□ -0.34
CHKB-203ENST00000464225 PCNTO95613 3336 aa12.94□□□□□ -0.34
CHKB-203ENST00000464225 PI4KAP2A4QPH2 592 aa12.94□□□□□ -0.34
CHKB-203ENST00000464225 ITGBL1O95965 494 aaPredicted RBP12.94□□□□□ -0.34
CHKB-203ENST00000464225 PCCAP05165 728 aaPredicted RBP12.94□□□□□ -0.34
CHKB-203ENST00000464225 LMOD1P29536 600 aaPredicted RBP12.94□□□□□ -0.34
CHKB-203ENST00000464225 EPS15P42566 896 aa12.94□□□□□ -0.34
CHKB-203ENST00000464225 CXCL9Q07325 125 aa12.94□□□□□ -0.34
CHKB-203ENST00000464225 KSR2Q6VAB6 950 aa12.94□□□□□ -0.34
CHKB-203ENST00000464225 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
CHKB-203ENST00000464225 PI4KAP1Q8N8J0 262 aa12.94□□□□□ -0.34
CHKB-203ENST00000464225 JARID2Q92833 1246 aaPredicted RBP12.94□□□□□ -0.34
CHKB-203ENST00000464225 CREBZFQ9NS37 354 aa12.94□□□□□ -0.34
CHKB-203ENST00000464225 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
CHKB-203ENST00000464225 IGKV5-2P06315 115 aa12.93□□□□□ -0.34
CHKB-203ENST00000464225 MAP1SQ66K74 1059 aaPredicted RBP12.93□□□□□ -0.34
CHKB-203ENST00000464225 G2E3Q7L622 706 aa12.93□□□□□ -0.34
CHKB-203ENST00000464225 NSFL1CQ9UNZ2 370 aaKnown RBP12.93□□□□□ -0.34
CHKB-203ENST00000464225 YDJCA8MPS7 323 aa12.92□□□□□ -0.34
CHKB-203ENST00000464225 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
CHKB-203ENST00000464225 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
CHKB-203ENST00000464225 RPS8P62241 208 aaKnown RBP12.92□□□□□ -0.34
CHKB-203ENST00000464225 GPSM2P81274 684 aa12.92□□□□□ -0.34
CHKB-203ENST00000464225 WDR63Q8IWG1 891 aa12.92□□□□□ -0.34
CHKB-203ENST00000464225 SEC31BQ9NQW1 1179 aa12.92□□□□□ -0.34
CHKB-203ENST00000464225 CDHR2Q9BYE9 1310 aa12.91□□□□□ -0.34
CHKB-203ENST00000464225 PDE8AO60658 829 aa12.91□□□□□ -0.34
CHKB-203ENST00000464225 RAD17O75943 681 aa12.91□□□□□ -0.34
CHKB-203ENST00000464225 GMPSP49915 693 aaPredicted RBP12.91□□□□□ -0.34
CHKB-203ENST00000464225 CWF19L2Q2TBE0 894 aaKnown RBP12.91□□□□□ -0.34
CHKB-203ENST00000464225 CCDC152Q4G0S7 254 aa12.91□□□□□ -0.34
CHKB-203ENST00000464225 CIAPIN1Q6FI81 312 aa12.91□□□□□ -0.34
CHKB-203ENST00000464225 FAM9BQ8IZU0 186 aa12.91□□□□□ -0.34
CHKB-203ENST00000464225 CNTROBQ8N137 903 aa12.91□□□□□ -0.34
CHKB-203ENST00000464225 CCDC85AQ96PX6 553 aaPredicted RBP12.91□□□□□ -0.34
CHKB-203ENST00000464225 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
CHKB-203ENST00000464225 GPRC5DQ9NZD1 345 aa12.91□□□□□ -0.34
CHKB-203ENST00000464225 POLLQ9UGP5 575 aa12.91□□□□□ -0.34
CHKB-203ENST00000464225 NEURL1BA8MQ27 555 aa12.9□□□□□ -0.34
CHKB-203ENST00000464225 C6orf229H3BNL8 230 aa12.9□□□□□ -0.34
CHKB-203ENST00000464225 VAMP4O75379 141 aa12.9□□□□□ -0.34
CHKB-203ENST00000464225 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.34
CHKB-203ENST00000464225 NEXNQ0ZGT2 675 aa12.9□□□□□ -0.34
CHKB-203ENST00000464225 FLIIQ13045 1269 aa12.9□□□□□ -0.34
CHKB-203ENST00000464225 WASHC4Q2M389 1173 aa12.9□□□□□ -0.34
CHKB-203ENST00000464225 MKRN1Q9UHC7 482 aaKnown RBP12.9□□□□□ -0.34
CHKB-203ENST00000464225 TMEM88BA6NKF7 163 aa12.89□□□□□ -0.35
CHKB-203ENST00000464225 RIMBP2O15034 1052 aa12.89□□□□□ -0.35
CHKB-203ENST00000464225 CTSWP56202 376 aa12.89□□□□□ -0.35
CHKB-203ENST00000464225 TNIP1Q15025 636 aa12.89□□□□□ -0.35
CHKB-203ENST00000464225 USP50Q70EL3 339 aaPredicted RBP12.89□□□□□ -0.35
CHKB-203ENST00000464225 TBC1D16Q8TBP0 767 aa12.89□□□□□ -0.35
CHKB-203ENST00000464225 GPR101Q96P66 508 aaPredicted RBP12.89□□□□□ -0.35
CHKB-203ENST00000464225 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
CHKB-203ENST00000464225 ADARB2Q9NS39 739 aaKnown RBP12.89□□□□□ -0.35
CHKB-203ENST00000464225 CNTNAP1P78357 1384 aa12.89□□□□□ -0.35
CHKB-203ENST00000464225 FKBP5Q13451 457 aaPredicted RBP12.88□□□□□ -0.35
CHKB-203ENST00000464225 UBE3BQ7Z3V4 1068 aa12.88□□□□□ -0.35
CHKB-203ENST00000464225 EYA3Q99504 573 aa12.88□□□□□ -0.35
CHKB-203ENST00000464225 PODXL2Q9NZ53 605 aa12.88□□□□□ -0.35
CHKB-203ENST00000464225 SHTN1A0MZ66 631 aa12.87□□□□□ -0.35
CHKB-203ENST00000464225 H7C1W4 665 aa12.87□□□□□ -0.35
CHKB-203ENST00000464225 ECE2O60344 883 aa12.87□□□□□ -0.35
CHKB-203ENST00000464225 UFL1O94874 794 aa12.87□□□□□ -0.35
CHKB-203ENST00000464225 HSPA1AP0DMV8 641 aaKnown RBP12.87□□□□□ -0.35
CHKB-203ENST00000464225 HSPA1BP0DMV9 641 aaKnown RBP12.87□□□□□ -0.35
CHKB-203ENST00000464225 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHKB-203ENST00000464225 GCKRQ14397 625 aa12.87□□□□□ -0.35
CHKB-203ENST00000464225 DOK7Q18PE1 504 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms