RNA–Protein interactions for RNA: ENST00000464117.1

SHISA4-202, Transcript of shisa family member 4, humanhuman

TSL 2

Gene SHISA4, Length 914 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-202ENST00000464117 WWC1Q8IX03 1113 aa25.73■■□□□ 1.71
SHISA4-202ENST00000464117 PCNTO95613 3336 aa25.73■■□□□ 1.71
SHISA4-202ENST00000464117 EAPPQ56P03 285 aaPredicted RBP25.72■■□□□ 1.71
SHISA4-202ENST00000464117 MPNDQ8N594 471 aa25.72■■□□□ 1.71
SHISA4-202ENST00000464117 ZNF428Q96B54 188 aa25.72■■□□□ 1.71
SHISA4-202ENST00000464117 GJA3Q9Y6H8 435 aa25.72■■□□□ 1.71
SHISA4-202ENST00000464117 IL16Q14005 1332 aa25.71■■□□□ 1.71
SHISA4-202ENST00000464117 DDX58O95786 925 aaKnown RBP25.71■■□□□ 1.71
SHISA4-202ENST00000464117 HSP90B1P14625 803 aaKnown RBP25.71■■□□□ 1.71
SHISA4-202ENST00000464117 AOC3Q16853 763 aa25.71■■□□□ 1.71
SHISA4-202ENST00000464117 IRS4O14654 1257 aaPredicted RBP25.7■■□□□ 1.7
SHISA4-202ENST00000464117 TSPYL6Q8N831 410 aa25.7■■□□□ 1.7
SHISA4-202ENST00000464117 ZBTB38Q8NAP3 1195 aaPredicted RBP25.7■■□□□ 1.7
SHISA4-202ENST00000464117 TSR2Q969E8 191 aaKnown RBP25.7■■□□□ 1.7
SHISA4-202ENST00000464117 LMOD1P29536 600 aaPredicted RBP25.69■■□□□ 1.7
SHISA4-202ENST00000464117 CCDC191Q8NCU4 936 aa25.69■■□□□ 1.7
SHISA4-202ENST00000464117 MYD88Q99836 296 aa25.69■■□□□ 1.7
SHISA4-202ENST00000464117 CREBZFQ9NS37 354 aa25.69■■□□□ 1.7
SHISA4-202ENST00000464117 PASKQ96RG2 1323 aa25.68■■□□□ 1.7
SHISA4-202ENST00000464117 KIAA2012Q0VF49 1180 aa25.68■■□□□ 1.7
SHISA4-202ENST00000464117 ZNRF3Q9ULT6 936 aa25.68■■□□□ 1.7
SHISA4-202ENST00000464117 CLEC11AQ9Y240 323 aa25.68■■□□□ 1.7
SHISA4-202ENST00000464117 ADAMTSL1Q8N6G6 1762 aa25.68■■□□□ 1.7
SHISA4-202ENST00000464117 LRRC37AA6NMS7 1700 aa25.67■■□□□ 1.7
SHISA4-202ENST00000464117 TAF1P21675 1872 aa25.67■■□□□ 1.7
SHISA4-202ENST00000464117 RTL5Q5HYW3 569 aaPredicted RBP25.67■■□□□ 1.7
SHISA4-202ENST00000464117 METTL22Q9BUU2 404 aaPredicted RBP25.67■■□□□ 1.7
SHISA4-202ENST00000464117 SCNN1DP51172 638 aa25.66■■□□□ 1.7
SHISA4-202ENST00000464117 CELF1Q92879 486 aaKnown RBP25.66■■□□□ 1.7
SHISA4-202ENST00000464117 STK31Q9BXU1 1019 aa25.66■■□□□ 1.7
SHISA4-202ENST00000464117 ITGBL1O95965 494 aaPredicted RBP25.65■■□□□ 1.7
SHISA4-202ENST00000464117 PCCAP05165 728 aaPredicted RBP25.65■■□□□ 1.7
SHISA4-202ENST00000464117 CWC25Q9NXE8 425 aaPredicted RBP25.65■■□□□ 1.7
SHISA4-202ENST00000464117 TWISTNBQ3B726 338 aaPredicted RBP25.64■■□□□ 1.7
SHISA4-202ENST00000464117 CXCL9Q07325 125 aa25.63■■□□□ 1.69
SHISA4-202ENST00000464117 KSR2Q6VAB6 950 aa25.63■■□□□ 1.69
SHISA4-202ENST00000464117 MAP3K2Q9Y2U5 619 aa25.63■■□□□ 1.69
SHISA4-202ENST00000464117 LTBP1Q14766 1721 aa25.63■■□□□ 1.69
SHISA4-202ENST00000464117 DUOX1Q9NRD9 1551 aa25.62■■□□□ 1.69
SHISA4-202ENST00000464117 EPS15P42566 896 aa25.62■■□□□ 1.69
SHISA4-202ENST00000464117 USP50Q70EL3 339 aaPredicted RBP25.62■■□□□ 1.69
SHISA4-202ENST00000464117 WDR63Q8IWG1 891 aa25.62■■□□□ 1.69
SHISA4-202ENST00000464117 CNTROBQ8N137 903 aa25.62■■□□□ 1.69
SHISA4-202ENST00000464117 RPS8P62241 208 aaKnown RBP25.61■■□□□ 1.69
SHISA4-202ENST00000464117 MAP1SQ66K74 1059 aaPredicted RBP25.61■■□□□ 1.69
SHISA4-202ENST00000464117 NSFL1CQ9UNZ2 370 aaKnown RBP25.61■■□□□ 1.69
SHISA4-202ENST00000464117 PI4KAP2A4QPH2 592 aa25.6■■□□□ 1.69
SHISA4-202ENST00000464117 TMEM88BA6NKF7 163 aa25.6■■□□□ 1.69
SHISA4-202ENST00000464117 PDE8AO60658 829 aa25.6■■□□□ 1.69
SHISA4-202ENST00000464117 TNIP1Q15025 636 aa25.6■■□□□ 1.69
SHISA4-202ENST00000464117 CCDC152Q4G0S7 254 aa25.6■■□□□ 1.69
SHISA4-202ENST00000464117 IFFO2Q5TF58 517 aa25.6■■□□□ 1.69
SHISA4-202ENST00000464117 CIAPIN1Q6FI81 312 aa25.6■■□□□ 1.69
SHISA4-202ENST00000464117 PI4KAP1Q8N8J0 262 aa25.6■■□□□ 1.69
SHISA4-202ENST00000464117 GPRC5DQ9NZD1 345 aa25.6■■□□□ 1.69
SHISA4-202ENST00000464117 CDHR2Q9BYE9 1310 aa25.6■■□□□ 1.69
SHISA4-202ENST00000464117 NEXNQ0ZGT2 675 aa25.59■■□□□ 1.69
SHISA4-202ENST00000464117 FANCIQ9NVI1 1328 aa25.59■■□□□ 1.69
SHISA4-202ENST00000464117 WASHC4Q2M389 1173 aa25.58■■□□□ 1.69
SHISA4-202ENST00000464117 ADARB2Q9NS39 739 aaKnown RBP25.58■■□□□ 1.69
SHISA4-202ENST00000464117 SLC4A2P04920 1241 aa25.57■■□□□ 1.68
SHISA4-202ENST00000464117 IGKV5-2P06315 115 aa25.57■■□□□ 1.68
SHISA4-202ENST00000464117 GMPSP49915 693 aaPredicted RBP25.57■■□□□ 1.68
SHISA4-202ENST00000464117 GPSM2P81274 684 aa25.57■■□□□ 1.68
SHISA4-202ENST00000464117 EYA3Q99504 573 aa25.57■■□□□ 1.68
SHISA4-202ENST00000464117 COL4A1P02462 1669 aa25.57■■□□□ 1.68
SHISA4-202ENST00000464117 C6orf229H3BNL8 230 aa25.56■■□□□ 1.68
SHISA4-202ENST00000464117 RAD17O75943 681 aa25.56■■□□□ 1.68
SHISA4-202ENST00000464117 SEC31BQ9NQW1 1179 aa25.56■■□□□ 1.68
SHISA4-202ENST00000464117 POLLQ9UGP5 575 aa25.56■■□□□ 1.68
SHISA4-202ENST00000464117 MKRN1Q9UHC7 482 aaKnown RBP25.56■■□□□ 1.68
SHISA4-202ENST00000464117 CNTNAP1P78357 1384 aa25.56■■□□□ 1.68
SHISA4-202ENST00000464117 YDJCA8MPS7 323 aa25.55■■□□□ 1.68
SHISA4-202ENST00000464117 BCL2L13Q9BXK5 485 aa25.55■■□□□ 1.68
SHISA4-202ENST00000464117 PODXL2Q9NZ53 605 aa25.55■■□□□ 1.68
SHISA4-202ENST00000464117 SALL2Q9Y467 1007 aaPredicted RBP25.55■■□□□ 1.68
SHISA4-202ENST00000464117 G2E3Q7L622 706 aa25.54■■□□□ 1.68
SHISA4-202ENST00000464117 JARID2Q92833 1246 aaPredicted RBP25.54■■□□□ 1.68
SHISA4-202ENST00000464117 CACNA1FO60840 1977 aa25.53■■□□□ 1.68
SHISA4-202ENST00000464117 FLIIQ13045 1269 aa25.53■■□□□ 1.68
SHISA4-202ENST00000464117 TBC1D16Q8TBP0 767 aa25.53■■□□□ 1.68
SHISA4-202ENST00000464117 NEURL1BA8MQ27 555 aa25.52■■□□□ 1.68
SHISA4-202ENST00000464117 RIMBP2O15034 1052 aa25.52■■□□□ 1.68
SHISA4-202ENST00000464117 CTSWP56202 376 aa25.52■■□□□ 1.68
SHISA4-202ENST00000464117 VAMP4O75379 141 aa25.51■■□□□ 1.67
SHISA4-202ENST00000464117 HSPA1AP0DMV8 641 aaKnown RBP25.51■■□□□ 1.67
SHISA4-202ENST00000464117 HSPA1BP0DMV9 641 aaKnown RBP25.51■■□□□ 1.67
SHISA4-202ENST00000464117 CWF19L2Q2TBE0 894 aaKnown RBP25.51■■□□□ 1.67
SHISA4-202ENST00000464117 ANKRD18AQ8IVF6 992 aa25.51■■□□□ 1.67
SHISA4-202ENST00000464117 FAM9BQ8IZU0 186 aa25.51■■□□□ 1.67
SHISA4-202ENST00000464117 DBNDD1Q9H9R9 158 aa25.51■■□□□ 1.67
SHISA4-202ENST00000464117 ANKIB1Q9P2G1 1089 aa25.51■■□□□ 1.67
SHISA4-202ENST00000464117 EXOSC9Q06265 439 aaKnown RBP25.5■■□□□ 1.67
SHISA4-202ENST00000464117 DPF2Q92785 391 aa25.5■■□□□ 1.67
SHISA4-202ENST00000464117 CCDC85AQ96PX6 553 aaPredicted RBP25.5■■□□□ 1.67
SHISA4-202ENST00000464117 CDC5LQ99459 802 aaKnown RBP25.5■■□□□ 1.67
SHISA4-202ENST00000464117 ZC3H12CQ9C0D7 883 aaKnown RBP25.5■■□□□ 1.67
SHISA4-202ENST00000464117 GGA1Q9UJY5 639 aa25.5■■□□□ 1.67
SHISA4-202ENST00000464117 ECE2O60344 883 aa25.49■■□□□ 1.67
SHISA4-202ENST00000464117 FKBP5Q13451 457 aaPredicted RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms