RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 FAM89AQ96GI7 184 aa22.64■■□□□ 1.21
COL5A1-204ENST00000463925 CHMP4AQ9BY43 222 aa22.64■■□□□ 1.21
COL5A1-204ENST00000463925 ELL2O00472 640 aaPredicted RBP22.63■■□□□ 1.21
COL5A1-204ENST00000463925 SCNN1DP51172 638 aa22.63■■□□□ 1.21
COL5A1-204ENST00000463925 CCDC27Q2M243 656 aa22.63■■□□□ 1.21
COL5A1-204ENST00000463925 RIC3Q7Z5B4 369 aa22.63■■□□□ 1.21
COL5A1-204ENST00000463925 C8orf58Q8NAV2 365 aa22.63■■□□□ 1.21
COL5A1-204ENST00000463925 ZNF428Q96B54 188 aa22.63■■□□□ 1.21
COL5A1-204ENST00000463925 PHAXQ9H814 394 aaKnown RBP22.63■■□□□ 1.21
COL5A1-204ENST00000463925 DUOX1Q9NRD9 1551 aa22.63■■□□□ 1.21
COL5A1-204ENST00000463925 TAF1P21675 1872 aa22.62■■□□□ 1.21
COL5A1-204ENST00000463925 KIAA2012Q0VF49 1180 aa22.62■■□□□ 1.21
COL5A1-204ENST00000463925 CLEC11AQ9Y240 323 aa22.62■■□□□ 1.21
COL5A1-204ENST00000463925 ZNRF3Q9ULT6 936 aa22.61■■□□□ 1.21
COL5A1-204ENST00000463925 PCNTO95613 3336 aa22.6■■□□□ 1.21
COL5A1-204ENST00000463925 IRS4O14654 1257 aaPredicted RBP22.6■■□□□ 1.21
COL5A1-204ENST00000463925 CCDC30Q5VVM6 783 aa22.6■■□□□ 1.21
COL5A1-204ENST00000463925 ZBTB38Q8NAP3 1195 aaPredicted RBP22.6■■□□□ 1.21
COL5A1-204ENST00000463925 EPS15P42566 896 aa22.59■■□□□ 1.21
COL5A1-204ENST00000463925 NCBP3Q53F19 620 aaKnown RBP22.59■■□□□ 1.21
COL5A1-204ENST00000463925 CNTROBQ8N137 903 aa22.59■■□□□ 1.21
COL5A1-204ENST00000463925 CELF1Q92879 486 aaKnown RBP22.59■■□□□ 1.21
COL5A1-204ENST00000463925 CNTNAP1P78357 1384 aa22.59■■□□□ 1.21
COL5A1-204ENST00000463925 TMEM88BA6NKF7 163 aa22.58■■□□□ 1.21
COL5A1-204ENST00000463925 HSP90B1P14625 803 aaKnown RBP22.58■■□□□ 1.21
COL5A1-204ENST00000463925 CXCL9Q07325 125 aa22.58■■□□□ 1.21
COL5A1-204ENST00000463925 MAP1SQ66K74 1059 aaPredicted RBP22.58■■□□□ 1.21
COL5A1-204ENST00000463925 WWC1Q8IX03 1113 aa22.58■■□□□ 1.21
COL5A1-204ENST00000463925 TSPYL6Q8N831 410 aa22.58■■□□□ 1.21
COL5A1-204ENST00000463925 CCDC191Q8NCU4 936 aa22.58■■□□□ 1.21
COL5A1-204ENST00000463925 MKRN1Q9UHC7 482 aaKnown RBP22.58■■□□□ 1.21
COL5A1-204ENST00000463925 DDX58O95786 925 aaKnown RBP22.57■■□□□ 1.2
COL5A1-204ENST00000463925 RTL5Q5HYW3 569 aaPredicted RBP22.57■■□□□ 1.2
COL5A1-204ENST00000463925 USP50Q70EL3 339 aaPredicted RBP22.57■■□□□ 1.2
COL5A1-204ENST00000463925 MYD88Q99836 296 aa22.57■■□□□ 1.2
COL5A1-204ENST00000463925 GPRC5DQ9NZD1 345 aa22.57■■□□□ 1.2
COL5A1-204ENST00000463925 COL4A1P02462 1669 aa22.57■■□□□ 1.2
COL5A1-204ENST00000463925 CDHR2Q9BYE9 1310 aa22.57■■□□□ 1.2
COL5A1-204ENST00000463925 HSPA1AP0DMV8 641 aaKnown RBP22.56■■□□□ 1.2
COL5A1-204ENST00000463925 HSPA1BP0DMV9 641 aaKnown RBP22.56■■□□□ 1.2
COL5A1-204ENST00000463925 TSR2Q969E8 191 aaKnown RBP22.56■■□□□ 1.2
COL5A1-204ENST00000463925 METTL22Q9BUU2 404 aaPredicted RBP22.56■■□□□ 1.2
COL5A1-204ENST00000463925 IL16Q14005 1332 aa22.56■■□□□ 1.2
COL5A1-204ENST00000463925 PCCAP05165 728 aaPredicted RBP22.55■■□□□ 1.2
COL5A1-204ENST00000463925 CIAPIN1Q6FI81 312 aa22.55■■□□□ 1.2
COL5A1-204ENST00000463925 MRS2Q9HD23 443 aa22.54■■□□□ 1.2
COL5A1-204ENST00000463925 ADARB2Q9NS39 739 aaKnown RBP22.54■■□□□ 1.2
COL5A1-204ENST00000463925 CWC25Q9NXE8 425 aaPredicted RBP22.54■■□□□ 1.2
COL5A1-204ENST00000463925 ZNF316A6NFI3 1004 aaPredicted RBP22.53■■□□□ 1.2
COL5A1-204ENST00000463925 ANP32CO43423 234 aa22.53■■□□□ 1.2
COL5A1-204ENST00000463925 RPS8P62241 208 aaKnown RBP22.53■■□□□ 1.2
COL5A1-204ENST00000463925 TNIP1Q15025 636 aa22.53■■□□□ 1.2
COL5A1-204ENST00000463925 NSFL1CQ9UNZ2 370 aaKnown RBP22.53■■□□□ 1.2
COL5A1-204ENST00000463925 YDJCA8MPS7 323 aa22.52■■□□□ 1.2
COL5A1-204ENST00000463925 GMPSP49915 693 aaPredicted RBP22.52■■□□□ 1.2
COL5A1-204ENST00000463925 WASHC4Q2M389 1173 aa22.52■■□□□ 1.2
COL5A1-204ENST00000463925 STK31Q9BXU1 1019 aa22.52■■□□□ 1.2
COL5A1-204ENST00000463925 MAP3K2Q9Y2U5 619 aa22.52■■□□□ 1.2
COL5A1-204ENST00000463925 PDE8AO60658 829 aa22.51■■□□□ 1.19
COL5A1-204ENST00000463925 RAD17O75943 681 aa22.51■■□□□ 1.19
COL5A1-204ENST00000463925 GPSM2P81274 684 aa22.51■■□□□ 1.19
COL5A1-204ENST00000463925 TWISTNBQ3B726 338 aaPredicted RBP22.51■■□□□ 1.19
COL5A1-204ENST00000463925 CCDC152Q4G0S7 254 aa22.51■■□□□ 1.19
COL5A1-204ENST00000463925 COL13A1Q5TAT6 717 aaPredicted RBP22.51■■□□□ 1.19
COL5A1-204ENST00000463925 KSR2Q6VAB6 950 aa22.51■■□□□ 1.19
COL5A1-204ENST00000463925 RASSF10A6NK89 507 aa22.5■■□□□ 1.19
COL5A1-204ENST00000463925 SEC31BQ9NQW1 1179 aa22.5■■□□□ 1.19
COL5A1-204ENST00000463925 POLLQ9UGP5 575 aa22.5■■□□□ 1.19
COL5A1-204ENST00000463925 PI4KAP2A4QPH2 592 aa22.49■■□□□ 1.19
COL5A1-204ENST00000463925 PI4KAP1Q8N8J0 262 aa22.49■■□□□ 1.19
COL5A1-204ENST00000463925 EYA3Q99504 573 aa22.49■■□□□ 1.19
COL5A1-204ENST00000463925 BCL2L13Q9BXK5 485 aa22.49■■□□□ 1.19
COL5A1-204ENST00000463925 PODXL2Q9NZ53 605 aa22.49■■□□□ 1.19
COL5A1-204ENST00000463925 C6orf229H3BNL8 230 aa22.48■■□□□ 1.19
COL5A1-204ENST00000463925 IGKV5-2P06315 115 aa22.48■■□□□ 1.19
COL5A1-204ENST00000463925 VEGFBP49765 207 aa22.48■■□□□ 1.19
COL5A1-204ENST00000463925 NEXNQ0ZGT2 675 aa22.47■■□□□ 1.19
COL5A1-204ENST00000463925 TBC1D16Q8TBP0 767 aa22.47■■□□□ 1.19
COL5A1-204ENST00000463925 DBNDD1Q9H9R9 158 aa22.47■■□□□ 1.19
COL5A1-204ENST00000463925 FANCIQ9NVI1 1328 aa22.47■■□□□ 1.19
COL5A1-204ENST00000463925 TRPM7Q96QT4 1865 aa22.47■■□□□ 1.19
COL5A1-204ENST00000463925 JARID2Q92833 1246 aaPredicted RBP22.46■■□□□ 1.19
COL5A1-204ENST00000463925 PGAP2Q9UHJ9 254 aa22.46■■□□□ 1.19
COL5A1-204ENST00000463925 RIMBP2O15034 1052 aa22.45■■□□□ 1.18
COL5A1-204ENST00000463925 CTSWP56202 376 aa22.45■■□□□ 1.18
COL5A1-204ENST00000463925 DEFB115Q30KQ5 88 aa22.45■■□□□ 1.18
COL5A1-204ENST00000463925 WDR63Q8IWG1 891 aa22.45■■□□□ 1.18
COL5A1-204ENST00000463925 ZC3H15Q8WU90 426 aaKnown RBP22.45■■□□□ 1.18
COL5A1-204ENST00000463925 DPF2Q92785 391 aa22.45■■□□□ 1.18
COL5A1-204ENST00000463925 CNOT7Q9UIV1 285 aaKnown RBP22.45■■□□□ 1.18
COL5A1-204ENST00000463925 ABT1Q9ULW3 272 aaKnown RBP22.45■■□□□ 1.18
COL5A1-204ENST00000463925 NEURL1BA8MQ27 555 aa22.44■■□□□ 1.18
COL5A1-204ENST00000463925 PSMD14O00487 310 aa22.44■■□□□ 1.18
COL5A1-204ENST00000463925 ECE2O60344 883 aa22.44■■□□□ 1.18
COL5A1-204ENST00000463925 SLC4A2P04920 1241 aa22.44■■□□□ 1.18
COL5A1-204ENST00000463925 FMR1Q06787 632 aaKnown RBP eCLIP22.44■■□□□ 1.18
COL5A1-204ENST00000463925 G2E3Q7L622 706 aa22.44■■□□□ 1.18
COL5A1-204ENST00000463925 TRPM4Q8TD43 1214 aa22.44■■□□□ 1.18
COL5A1-204ENST00000463925 CACNA1FO60840 1977 aa22.43■■□□□ 1.18
COL5A1-204ENST00000463925 MYH3P11055 1940 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms