RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SLC10A5Q5PT55 438 aa12.21□□□□□ -0.45
PTPRD-207ENST00000463477 CEP85Q6P2H3 762 aa12.21□□□□□ -0.45
PTPRD-207ENST00000463477 RIC3Q7Z5B4 369 aa12.21□□□□□ -0.45
PTPRD-207ENST00000463477 NLRP10Q86W26 655 aa12.21□□□□□ -0.45
PTPRD-207ENST00000463477 NUTM1Q86Y26 1132 aa12.21□□□□□ -0.45
PTPRD-207ENST00000463477 SNX21Q969T3 373 aa12.21□□□□□ -0.45
PTPRD-207ENST00000463477 MASTLQ96GX5 879 aa12.21□□□□□ -0.45
PTPRD-207ENST00000463477 ISCA1Q9BUE6 129 aa12.21□□□□□ -0.45
PTPRD-207ENST00000463477 YY1P25490 414 aa12.2□□□□□ -0.46
PTPRD-207ENST00000463477 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
PTPRD-207ENST00000463477 STYK1Q6J9G0 422 aa12.2□□□□□ -0.46
PTPRD-207ENST00000463477 CNKSR1Q969H4 720 aa12.2□□□□□ -0.46
PTPRD-207ENST00000463477 ZNF622Q969S3 477 aaKnown RBP eCLIP12.2□□□□□ -0.46
PTPRD-207ENST00000463477 NPR1P16066 1061 aa12.19□□□□□ -0.46
PTPRD-207ENST00000463477 CRY2Q49AN0 593 aa12.19□□□□□ -0.46
PTPRD-207ENST00000463477 KSR2Q6VAB6 950 aa12.19□□□□□ -0.46
PTPRD-207ENST00000463477 HMMRO75330 724 aa12.19□□□□□ -0.46
PTPRD-207ENST00000463477 PLEKHM2Q8IWE5 1019 aa12.19□□□□□ -0.46
PTPRD-207ENST00000463477 METTL22Q9BUU2 404 aaPredicted RBP12.19□□□□□ -0.46
PTPRD-207ENST00000463477 TRMT112Q9UI30 125 aaKnown RBP12.19□□□□□ -0.46
PTPRD-207ENST00000463477 BRCA1P38398 1863 aaKnown RBP12.18□□□□□ -0.46
PTPRD-207ENST00000463477 PI4KAP2A4QPH2 592 aa12.18□□□□□ -0.46
PTPRD-207ENST00000463477 ATP5J2-PTCD1G3V325 749 aa12.18□□□□□ -0.46
PTPRD-207ENST00000463477 CDC45O75419 566 aa12.18□□□□□ -0.46
PTPRD-207ENST00000463477 ALDH1B1P30837 517 aa12.18□□□□□ -0.46
PTPRD-207ENST00000463477 GSE1Q14687 1217 aa12.18□□□□□ -0.46
PTPRD-207ENST00000463477 ARHGAP27Q6ZUM4 889 aa12.18□□□□□ -0.46
PTPRD-207ENST00000463477 G2E3Q7L622 706 aa12.18□□□□□ -0.46
PTPRD-207ENST00000463477 PI4KAP1Q8N8J0 262 aa12.18□□□□□ -0.46
PTPRD-207ENST00000463477 NLRP3Q96P20 1036 aa12.18□□□□□ -0.46
PTPRD-207ENST00000463477 RIC1Q4ADV7 1423 aa12.18□□□□□ -0.46
PTPRD-207ENST00000463477 ANKRD31Q8N7Z5 1873 aa12.17□□□□□ -0.46
PTPRD-207ENST00000463477 FRAT2O75474 233 aaPredicted RBP12.17□□□□□ -0.46
PTPRD-207ENST00000463477 HOXA10P31260 410 aaPredicted RBP12.17□□□□□ -0.46
PTPRD-207ENST00000463477 FLIIQ13045 1269 aa12.17□□□□□ -0.46
PTPRD-207ENST00000463477 TTC22Q5TAA0 569 aa12.17□□□□□ -0.46
PTPRD-207ENST00000463477 CCDC191Q8NCU4 936 aa12.17□□□□□ -0.46
PTPRD-207ENST00000463477 MAP3K2Q9Y2U5 619 aa12.17□□□□□ -0.46
PTPRD-207ENST00000463477 ABCC12Q96J65 1359 aa12.17□□□□□ -0.46
PTPRD-207ENST00000463477 SH3TC1Q8TE82 1336 aa12.17□□□□□ -0.46
PTPRD-207ENST00000463477 TBC1D9Q6ZT07 1266 aa12.16□□□□□ -0.46
PTPRD-207ENST00000463477 C7orf43Q8WVR3 580 aa12.16□□□□□ -0.46
PTPRD-207ENST00000463477 MEIS3Q99687 375 aa12.16□□□□□ -0.46
PTPRD-207ENST00000463477 CHD4Q14839 1912 aa12.16□□□□□ -0.46
PTPRD-207ENST00000463477 GNAI3P08754 354 aa12.16□□□□□ -0.46
PTPRD-207ENST00000463477 HSCBQ8IWL3 235 aa12.16□□□□□ -0.46
PTPRD-207ENST00000463477 SYNE4Q8N205 404 aa12.16□□□□□ -0.46
PTPRD-207ENST00000463477 MYD88Q99836 296 aa12.16□□□□□ -0.46
PTPRD-207ENST00000463477 OSBPL3Q9H4L5 887 aa12.16□□□□□ -0.46
PTPRD-207ENST00000463477 GSPT1P15170 499 aaKnown RBP12.15□□□□□ -0.46
PTPRD-207ENST00000463477 NEXNQ0ZGT2 675 aa12.15□□□□□ -0.46
PTPRD-207ENST00000463477 FKBP5Q13451 457 aaPredicted RBP12.15□□□□□ -0.46
PTPRD-207ENST00000463477 PRPF40BQ6NWY9 871 aaKnown RBP12.15□□□□□ -0.46
PTPRD-207ENST00000463477 ZBTB38Q8NAP3 1195 aaPredicted RBP12.15□□□□□ -0.46
PTPRD-207ENST00000463477 FAM89AQ96GI7 184 aa12.15□□□□□ -0.46
PTPRD-207ENST00000463477 CRAMP1Q96RY5 1269 aa12.15□□□□□ -0.46
PTPRD-207ENST00000463477 CHMP5Q9NZZ3 219 aa12.15□□□□□ -0.46
PTPRD-207ENST00000463477 ADCY9O60503 1353 aa12.15□□□□□ -0.46
PTPRD-207ENST00000463477 C21orf2O43822 256 aa12.14□□□□□ -0.47
PTPRD-207ENST00000463477 GNAI2P04899 355 aa12.14□□□□□ -0.47
PTPRD-207ENST00000463477 IGKV5-2P06315 115 aa12.14□□□□□ -0.47
PTPRD-207ENST00000463477 HCLS1P14317 486 aaPredicted RBP12.14□□□□□ -0.47
PTPRD-207ENST00000463477 SOGA3Q5TF21 947 aa12.14□□□□□ -0.47
PTPRD-207ENST00000463477 RPGRQ92834 1020 aaKnown RBP12.14□□□□□ -0.47
PTPRD-207ENST00000463477 CWC25Q9NXE8 425 aaPredicted RBP12.14□□□□□ -0.47
PTPRD-207ENST00000463477 ARFGEF1Q9Y6D6 1849 aa12.14□□□□□ -0.47
PTPRD-207ENST00000463477 DLEC1Q9Y238 1755 aa12.14□□□□□ -0.47
PTPRD-207ENST00000463477 PCCAP05165 728 aaPredicted RBP12.13□□□□□ -0.47
PTPRD-207ENST00000463477 HSP90B1P14625 803 aaKnown RBP12.13□□□□□ -0.47
PTPRD-207ENST00000463477 DDIT3P35638 169 aa12.13□□□□□ -0.47
PTPRD-207ENST00000463477 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
PTPRD-207ENST00000463477 DNAAF4Q8WXU2 420 aa12.13□□□□□ -0.47
PTPRD-207ENST00000463477 RBM17Q96I25 401 aaKnown RBP12.13□□□□□ -0.47
PTPRD-207ENST00000463477 KIF2CQ99661 725 aa12.13□□□□□ -0.47
PTPRD-207ENST00000463477 SLKQ9H2G2 1235 aaPredicted RBP12.13□□□□□ -0.47
PTPRD-207ENST00000463477 CIZ1Q9ULV3 898 aaPredicted RBP12.13□□□□□ -0.47
PTPRD-207ENST00000463477 ANKRD36CQ5JPF3 1778 aa12.13□□□□□ -0.47
PTPRD-207ENST00000463477 IRS4O14654 1257 aaPredicted RBP12.13□□□□□ -0.47
PTPRD-207ENST00000463477 SF3B3Q15393 1217 aaKnown RBP12.13□□□□□ -0.47
PTPRD-207ENST00000463477 NEURL1BA8MQ27 555 aa12.12□□□□□ -0.47
PTPRD-207ENST00000463477 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
PTPRD-207ENST00000463477 ZNF784Q8NCA9 323 aaPredicted RBP12.12□□□□□ -0.47
PTPRD-207ENST00000463477 LINS1Q8NG48 757 aa12.12□□□□□ -0.47
PTPRD-207ENST00000463477 AK9Q5TCS8 1911 aa12.12□□□□□ -0.47
PTPRD-207ENST00000463477 ARFGEF2Q9Y6D5 1785 aa12.11□□□□□ -0.47
PTPRD-207ENST00000463477 NFKBIEO00221 500 aa12.11□□□□□ -0.47
PTPRD-207ENST00000463477 BBOX1O75936 387 aa12.11□□□□□ -0.47
PTPRD-207ENST00000463477 ATP8B2P98198 1209 aa12.11□□□□□ -0.47
PTPRD-207ENST00000463477 CWF19L2Q2TBE0 894 aaKnown RBP12.11□□□□□ -0.47
PTPRD-207ENST00000463477 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
PTPRD-207ENST00000463477 ZNF219Q9P2Y4 722 aaPredicted RBP12.11□□□□□ -0.47
PTPRD-207ENST00000463477 SLX4Q8IY92 1834 aa12.11□□□□□ -0.47
PTPRD-207ENST00000463477 SALL3Q9BXA9 1300 aa12.11□□□□□ -0.47
PTPRD-207ENST00000463477 LTBP3Q9NS15 1303 aa12.11□□□□□ -0.47
PTPRD-207ENST00000463477 COL11A2P13942 1736 aaPredicted RBP12.11□□□□□ -0.47
PTPRD-207ENST00000463477 F6X3S4 739 aa12.1□□□□□ -0.47
PTPRD-207ENST00000463477 H7C1W4 665 aa12.1□□□□□ -0.47
PTPRD-207ENST00000463477 LMNB1P20700 586 aa12.1□□□□□ -0.47
PTPRD-207ENST00000463477 GRIPAP1Q4V328 841 aa12.1□□□□□ -0.47
PTPRD-207ENST00000463477 CCDC93Q567U6 631 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms