RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 LRRC37AA6NMS7 1700 aa28.58■■■□□ 2.17
PDLIM7-206ENST00000463411 TAF1P21675 1872 aa28.58■■■□□ 2.17
PDLIM7-206ENST00000463411 AOC3Q16853 763 aa28.58■■■□□ 2.17
PDLIM7-206ENST00000463411 PNMA8AQ86V59 439 aaPredicted RBP28.58■■■□□ 2.17
PDLIM7-206ENST00000463411 WWC1Q8IX03 1113 aa28.58■■■□□ 2.17
PDLIM7-206ENST00000463411 MPNDQ8N594 471 aa28.58■■■□□ 2.17
PDLIM7-206ENST00000463411 HSP90B1P14625 803 aaKnown RBP28.57■■■□□ 2.16
PDLIM7-206ENST00000463411 LMOD1P29536 600 aaPredicted RBP28.57■■■□□ 2.16
PDLIM7-206ENST00000463411 TSR2Q969E8 191 aaKnown RBP28.57■■■□□ 2.16
PDLIM7-206ENST00000463411 RTL5Q5HYW3 569 aaPredicted RBP28.56■■■□□ 2.16
PDLIM7-206ENST00000463411 MYD88Q99836 296 aa28.56■■■□□ 2.16
PDLIM7-206ENST00000463411 RTFDC1Q9BY42 306 aaPredicted RBP28.56■■■□□ 2.16
PDLIM7-206ENST00000463411 ADAMTSL1Q8N6G6 1762 aa28.55■■■□□ 2.16
PDLIM7-206ENST00000463411 IL16Q14005 1332 aa28.55■■■□□ 2.16
PDLIM7-206ENST00000463411 IRS4O14654 1257 aaPredicted RBP28.55■■■□□ 2.16
PDLIM7-206ENST00000463411 SF3B3Q15393 1217 aaKnown RBP28.55■■■□□ 2.16
PDLIM7-206ENST00000463411 NCBP3Q53F19 620 aaKnown RBP28.55■■■□□ 2.16
PDLIM7-206ENST00000463411 STK31Q9BXU1 1019 aa28.55■■■□□ 2.16
PDLIM7-206ENST00000463411 CLEC11AQ9Y240 323 aa28.55■■■□□ 2.16
PDLIM7-206ENST00000463411 TSPYL6Q8N831 410 aa28.54■■■□□ 2.16
PDLIM7-206ENST00000463411 ZBTB38Q8NAP3 1195 aaPredicted RBP28.54■■■□□ 2.16
PDLIM7-206ENST00000463411 JMYQ8N9B5 988 aa28.53■■■□□ 2.16
PDLIM7-206ENST00000463411 CCDC191Q8NCU4 936 aa28.53■■■□□ 2.16
PDLIM7-206ENST00000463411 TWISTNBQ3B726 338 aaPredicted RBP28.51■■■□□ 2.15
PDLIM7-206ENST00000463411 METTL22Q9BUU2 404 aaPredicted RBP28.51■■■□□ 2.15
PDLIM7-206ENST00000463411 CREBZFQ9NS37 354 aa28.51■■■□□ 2.15
PDLIM7-206ENST00000463411 CWC25Q9NXE8 425 aaPredicted RBP28.51■■■□□ 2.15
PDLIM7-206ENST00000463411 ZNRF3Q9ULT6 936 aa28.51■■■□□ 2.15
PDLIM7-206ENST00000463411 DUOX1Q9NRD9 1551 aa28.5■■■□□ 2.15
PDLIM7-206ENST00000463411 LTBP1Q14766 1721 aa28.5■■■□□ 2.15
PDLIM7-206ENST00000463411 KIAA2012Q0VF49 1180 aa28.5■■■□□ 2.15
PDLIM7-206ENST00000463411 CELF1Q92879 486 aaKnown RBP28.49■■■□□ 2.15
PDLIM7-206ENST00000463411 PASKQ96RG2 1323 aa28.48■■■□□ 2.15
PDLIM7-206ENST00000463411 PCCAP05165 728 aaPredicted RBP28.48■■■□□ 2.15
PDLIM7-206ENST00000463411 MAP3K2Q9Y2U5 619 aa28.48■■■□□ 2.15
PDLIM7-206ENST00000463411 SCNN1DP51172 638 aa28.47■■■□□ 2.15
PDLIM7-206ENST00000463411 KSR2Q6VAB6 950 aa28.47■■■□□ 2.15
PDLIM7-206ENST00000463411 NEXNQ0ZGT2 675 aa28.46■■■□□ 2.15
PDLIM7-206ENST00000463411 CCDC152Q4G0S7 254 aa28.45■■■□□ 2.14
PDLIM7-206ENST00000463411 NSFL1CQ9UNZ2 370 aaKnown RBP28.45■■■□□ 2.14
PDLIM7-206ENST00000463411 SALL2Q9Y467 1007 aaPredicted RBP28.45■■■□□ 2.14
PDLIM7-206ENST00000463411 FANCIQ9NVI1 1328 aa28.44■■■□□ 2.14
PDLIM7-206ENST00000463411 PI4KAP2A4QPH2 592 aa28.44■■■□□ 2.14
PDLIM7-206ENST00000463411 PDE8AO60658 829 aa28.44■■■□□ 2.14
PDLIM7-206ENST00000463411 CXCL9Q07325 125 aa28.44■■■□□ 2.14
PDLIM7-206ENST00000463411 CIAPIN1Q6FI81 312 aa28.44■■■□□ 2.14
PDLIM7-206ENST00000463411 WDR63Q8IWG1 891 aa28.44■■■□□ 2.14
PDLIM7-206ENST00000463411 PI4KAP1Q8N8J0 262 aa28.44■■■□□ 2.14
PDLIM7-206ENST00000463411 COL4A1P02462 1669 aa28.44■■■□□ 2.14
PDLIM7-206ENST00000463411 ITGBL1O95965 494 aaPredicted RBP28.43■■■□□ 2.14
PDLIM7-206ENST00000463411 EPS15P42566 896 aa28.43■■■□□ 2.14
PDLIM7-206ENST00000463411 RPS8P62241 208 aaKnown RBP28.43■■■□□ 2.14
PDLIM7-206ENST00000463411 TNIP1Q15025 636 aa28.43■■■□□ 2.14
PDLIM7-206ENST00000463411 MAP1SQ66K74 1059 aaPredicted RBP28.43■■■□□ 2.14
PDLIM7-206ENST00000463411 USP50Q70EL3 339 aaPredicted RBP28.43■■■□□ 2.14
PDLIM7-206ENST00000463411 CNTROBQ8N137 903 aa28.43■■■□□ 2.14
PDLIM7-206ENST00000463411 CACNA1FO60840 1977 aa28.42■■■□□ 2.14
PDLIM7-206ENST00000463411 SLC4A2P04920 1241 aa28.42■■■□□ 2.14
PDLIM7-206ENST00000463411 WASHC4Q2M389 1173 aa28.42■■■□□ 2.14
PDLIM7-206ENST00000463411 GPRC5DQ9NZD1 345 aa28.42■■■□□ 2.14
PDLIM7-206ENST00000463411 CDHR2Q9BYE9 1310 aa28.42■■■□□ 2.14
PDLIM7-206ENST00000463411 MYH3P11055 1940 aa28.41■■■□□ 2.14
PDLIM7-206ENST00000463411 TMEM88BA6NKF7 163 aa28.41■■■□□ 2.14
PDLIM7-206ENST00000463411 C6orf229H3BNL8 230 aa28.41■■■□□ 2.14
PDLIM7-206ENST00000463411 EYA3Q99504 573 aa28.41■■■□□ 2.14
PDLIM7-206ENST00000463411 ADARB2Q9NS39 739 aaKnown RBP28.41■■■□□ 2.14
PDLIM7-206ENST00000463411 MKRN1Q9UHC7 482 aaKnown RBP28.41■■■□□ 2.14
PDLIM7-206ENST00000463411 GPSM2P81274 684 aa28.4■■■□□ 2.14
PDLIM7-206ENST00000463411 FAM9BQ8IZU0 186 aa28.4■■■□□ 2.14
PDLIM7-206ENST00000463411 BCL2L13Q9BXK5 485 aa28.4■■■□□ 2.14
PDLIM7-206ENST00000463411 RAD17O75943 681 aa28.39■■■□□ 2.14
PDLIM7-206ENST00000463411 GMPSP49915 693 aaPredicted RBP28.39■■■□□ 2.14
PDLIM7-206ENST00000463411 JARID2Q92833 1246 aaPredicted RBP28.39■■■□□ 2.14
PDLIM7-206ENST00000463411 SEC31BQ9NQW1 1179 aa28.39■■■□□ 2.14
PDLIM7-206ENST00000463411 IGKV5-2P06315 115 aa28.38■■■□□ 2.13
PDLIM7-206ENST00000463411 CNTNAP1P78357 1384 aa28.37■■■□□ 2.13
PDLIM7-206ENST00000463411 RIMBP2O15034 1052 aa28.37■■■□□ 2.13
PDLIM7-206ENST00000463411 FLIIQ13045 1269 aa28.37■■■□□ 2.13
PDLIM7-206ENST00000463411 IFFO2Q5TF58 517 aa28.37■■■□□ 2.13
PDLIM7-206ENST00000463411 G2E3Q7L622 706 aa28.37■■■□□ 2.13
PDLIM7-206ENST00000463411 CCDC85AQ96PX6 553 aaPredicted RBP28.37■■■□□ 2.13
PDLIM7-206ENST00000463411 CTSWP56202 376 aa28.36■■■□□ 2.13
PDLIM7-206ENST00000463411 ANKIB1Q9P2G1 1089 aa28.36■■■□□ 2.13
PDLIM7-206ENST00000463411 POLLQ9UGP5 575 aa28.36■■■□□ 2.13
PDLIM7-206ENST00000463411 YDJCA8MPS7 323 aa28.35■■■□□ 2.13
PDLIM7-206ENST00000463411 NEURL1BA8MQ27 555 aa28.35■■■□□ 2.13
PDLIM7-206ENST00000463411 FKBP5Q13451 457 aaPredicted RBP28.35■■■□□ 2.13
PDLIM7-206ENST00000463411 CWF19L2Q2TBE0 894 aaKnown RBP28.35■■■□□ 2.13
PDLIM7-206ENST00000463411 ANKRD18AQ8IVF6 992 aa28.35■■■□□ 2.13
PDLIM7-206ENST00000463411 TBC1D16Q8TBP0 767 aa28.35■■■□□ 2.13
PDLIM7-206ENST00000463411 MYH16Q9H6N6 1097 aa28.35■■■□□ 2.13
PDLIM7-206ENST00000463411 DBNDD1Q9H9R9 158 aa28.35■■■□□ 2.13
PDLIM7-206ENST00000463411 EXOSC9Q06265 439 aaKnown RBP28.34■■■□□ 2.13
PDLIM7-206ENST00000463411 CDC5LQ99459 802 aaKnown RBP28.34■■■□□ 2.13
PDLIM7-206ENST00000463411 PODXL2Q9NZ53 605 aa28.34■■■□□ 2.13
PDLIM7-206ENST00000463411 SPEF2Q9C093 1822 aa28.34■■■□□ 2.13
PDLIM7-206ENST00000463411 UFL1O94874 794 aa28.33■■■□□ 2.13
PDLIM7-206ENST00000463411 HSPA1AP0DMV8 641 aaKnown RBP28.33■■■□□ 2.13
PDLIM7-206ENST00000463411 HSPA1BP0DMV9 641 aaKnown RBP28.33■■■□□ 2.13
PDLIM7-206ENST00000463411 ZC3H12CQ9C0D7 883 aaKnown RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms