RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 RTL5Q5HYW3 569 aaPredicted RBP16.75■□□□□ 0.27
HDAC1-203ENST00000463172 DPP8Q6V1X1 898 aaPredicted RBP16.75■□□□□ 0.27
HDAC1-203ENST00000463172 MPNDQ8N594 471 aa16.75■□□□□ 0.27
HDAC1-203ENST00000463172 PI4KAP1Q8N8J0 262 aa16.75■□□□□ 0.27
HDAC1-203ENST00000463172 SCN4AP35499 1836 aa16.75■□□□□ 0.27
HDAC1-203ENST00000463172 FKBP5Q13451 457 aaPredicted RBP16.74■□□□□ 0.27
HDAC1-203ENST00000463172 NIM1KQ8IY84 436 aa16.74■□□□□ 0.27
HDAC1-203ENST00000463172 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
HDAC1-203ENST00000463172 PDE8AO60658 829 aa16.73■□□□□ 0.27
HDAC1-203ENST00000463172 VAMP4O75379 141 aa16.73■□□□□ 0.27
HDAC1-203ENST00000463172 DDNO94850 711 aaPredicted RBP16.73■□□□□ 0.27
HDAC1-203ENST00000463172 FLIIQ13045 1269 aa16.73■□□□□ 0.27
HDAC1-203ENST00000463172 CCDC152Q4G0S7 254 aa16.73■□□□□ 0.27
HDAC1-203ENST00000463172 ZNF428Q96B54 188 aa16.73■□□□□ 0.27
HDAC1-203ENST00000463172 SNED1Q8TER0 1413 aa16.72■□□□□ 0.27
HDAC1-203ENST00000463172 FZD9O00144 591 aa16.72■□□□□ 0.27
HDAC1-203ENST00000463172 PPIP5K2O43314 1243 aa16.72■□□□□ 0.27
HDAC1-203ENST00000463172 GPC2Q8N158 579 aa16.72■□□□□ 0.27
HDAC1-203ENST00000463172 L3MBTL3Q96JM7 780 aaPredicted RBP16.72■□□□□ 0.27
HDAC1-203ENST00000463172 CDHR2Q9BYE9 1310 aa16.71■□□□□ 0.27
HDAC1-203ENST00000463172 RTFDC1Q9BY42 306 aaPredicted RBP16.71■□□□□ 0.27
HDAC1-203ENST00000463172 TAF1P21675 1872 aa16.71■□□□□ 0.27
HDAC1-203ENST00000463172 MYH3P11055 1940 aa16.7■□□□□ 0.26
HDAC1-203ENST00000463172 LMOD1P29536 600 aaPredicted RBP16.7■□□□□ 0.26
HDAC1-203ENST00000463172 RPS8P62241 208 aaKnown RBP16.7■□□□□ 0.26
HDAC1-203ENST00000463172 DNAAF4Q8WXU2 420 aa16.7■□□□□ 0.26
HDAC1-203ENST00000463172 HACL1Q9UJ83 578 aa16.7■□□□□ 0.26
HDAC1-203ENST00000463172 ZNF541Q9H0D2 1346 aa16.7■□□□□ 0.26
HDAC1-203ENST00000463172 NEURL1BA8MQ27 555 aa16.69■□□□□ 0.26
HDAC1-203ENST00000463172 E9PSI1 815 aa16.69■□□□□ 0.26
HDAC1-203ENST00000463172 G2E3Q7L622 706 aa16.69■□□□□ 0.26
HDAC1-203ENST00000463172 LRRC37AA6NMS7 1700 aa16.69■□□□□ 0.26
HDAC1-203ENST00000463172 POTECB2RU33 542 aa16.68■□□□□ 0.26
HDAC1-203ENST00000463172 IGKV5-2P06315 115 aa16.68■□□□□ 0.26
HDAC1-203ENST00000463172 AOC3Q16853 763 aa16.68■□□□□ 0.26
HDAC1-203ENST00000463172 PNMA8AQ86V59 439 aaPredicted RBP16.68■□□□□ 0.26
HDAC1-203ENST00000463172 LINS1Q8NG48 757 aa16.68■□□□□ 0.26
HDAC1-203ENST00000463172 CELF1Q92879 486 aaKnown RBP16.68■□□□□ 0.26
HDAC1-203ENST00000463172 CDC5LQ99459 802 aaKnown RBP16.68■□□□□ 0.26
HDAC1-203ENST00000463172 EYA3Q99504 573 aa16.68■□□□□ 0.26
HDAC1-203ENST00000463172 ZNRF3Q9ULT6 936 aa16.68■□□□□ 0.26
HDAC1-203ENST00000463172 NSFL1CQ9UNZ2 370 aaKnown RBP16.68■□□□□ 0.26
HDAC1-203ENST00000463172 GJA3Q9Y6H8 435 aa16.68■□□□□ 0.26
HDAC1-203ENST00000463172 ZNF521Q96K83 1311 aa16.68■□□□□ 0.26
HDAC1-203ENST00000463172 CEP350Q5VT06 3117 aa16.68■□□□□ 0.26
HDAC1-203ENST00000463172 KIAA2012Q0VF49 1180 aa16.67■□□□□ 0.26
HDAC1-203ENST00000463172 CHADLQ6NUI6 762 aa16.67■□□□□ 0.26
HDAC1-203ENST00000463172 ANKRD18AQ8IVF6 992 aa16.67■□□□□ 0.26
HDAC1-203ENST00000463172 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
HDAC1-203ENST00000463172 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
HDAC1-203ENST00000463172 CTSWP56202 376 aa16.66■□□□□ 0.26
HDAC1-203ENST00000463172 TNIP1Q15025 636 aa16.66■□□□□ 0.26
HDAC1-203ENST00000463172 WASHC4Q2M389 1173 aa16.66■□□□□ 0.26
HDAC1-203ENST00000463172 CWF19L2Q2TBE0 894 aaKnown RBP16.66■□□□□ 0.26
HDAC1-203ENST00000463172 LDHDQ86WU2 507 aa16.66■□□□□ 0.26
HDAC1-203ENST00000463172 TAF1DQ9H5J8 278 aaPredicted RBP16.66■□□□□ 0.26
HDAC1-203ENST00000463172 EPHX2P34913 555 aa16.65■□□□□ 0.26
HDAC1-203ENST00000463172 GCKRQ14397 625 aa16.65■□□□□ 0.26
HDAC1-203ENST00000463172 EAPPQ56P03 285 aaPredicted RBP16.65■□□□□ 0.26
HDAC1-203ENST00000463172 UBE3BQ7Z3V4 1068 aa16.65■□□□□ 0.26
HDAC1-203ENST00000463172 ANKIB1Q9P2G1 1089 aa16.65■□□□□ 0.26
HDAC1-203ENST00000463172 CLEC11AQ9Y240 323 aa16.65■□□□□ 0.26
HDAC1-203ENST00000463172 G3V3G9 751 aa16.64■□□□□ 0.25
HDAC1-203ENST00000463172 H7C1W4 665 aa16.64■□□□□ 0.25
HDAC1-203ENST00000463172 DCAF8Q5TAQ9 597 aa16.64■□□□□ 0.25
HDAC1-203ENST00000463172 JARID2Q92833 1246 aaPredicted RBP16.64■□□□□ 0.25
HDAC1-203ENST00000463172 GPSM2P81274 684 aa16.63■□□□□ 0.25
HDAC1-203ENST00000463172 CIAPIN1Q6FI81 312 aa16.63■□□□□ 0.25
HDAC1-203ENST00000463172 CCDC85AQ96PX6 553 aaPredicted RBP16.63■□□□□ 0.25
HDAC1-203ENST00000463172 ZC3H12CQ9C0D7 883 aaKnown RBP16.63■□□□□ 0.25
HDAC1-203ENST00000463172 SEC31BQ9NQW1 1179 aa16.63■□□□□ 0.25
HDAC1-203ENST00000463172 RTL9Q8NET4 1388 aa16.63■□□□□ 0.25
HDAC1-203ENST00000463172 IGHMBP2P38935 993 aaKnown RBP16.62■□□□□ 0.25
HDAC1-203ENST00000463172 TTLL11Q8NHH1 800 aa16.62■□□□□ 0.25
HDAC1-203ENST00000463172 PLA2G12BQ9BX93 195 aa16.62■□□□□ 0.25
HDAC1-203ENST00000463172 PODXL2Q9NZ53 605 aa16.62■□□□□ 0.25
HDAC1-203ENST00000463172 GGA1Q9UJY5 639 aa16.62■□□□□ 0.25
HDAC1-203ENST00000463172 COL4A5P29400 1685 aa16.62■□□□□ 0.25
HDAC1-203ENST00000463172 SLFN5Q08AF3 891 aa16.61■□□□□ 0.25
HDAC1-203ENST00000463172 SLC51AQ86UW1 340 aa16.61■□□□□ 0.25
HDAC1-203ENST00000463172 TBC1D16Q8TBP0 767 aa16.61■□□□□ 0.25
HDAC1-203ENST00000463172 BCL2L13Q9BXK5 485 aa16.61■□□□□ 0.25
HDAC1-203ENST00000463172 XDHP47989 1333 aa16.61■□□□□ 0.25
HDAC1-203ENST00000463172 ALDH1L1O75891 902 aa16.6■□□□□ 0.25
HDAC1-203ENST00000463172 UFL1O94874 794 aa16.6■□□□□ 0.25
HDAC1-203ENST00000463172 CXCL9Q07325 125 aa16.6■□□□□ 0.25
HDAC1-203ENST00000463172 USP50Q70EL3 339 aaPredicted RBP16.6■□□□□ 0.25
HDAC1-203ENST00000463172 BSDC1Q9NW68 430 aaPredicted RBP16.6■□□□□ 0.25
HDAC1-203ENST00000463172 C9orf78Q9NZ63 289 aaPredicted RBP16.6■□□□□ 0.25
HDAC1-203ENST00000463172 DUOX1Q9NRD9 1551 aa16.6■□□□□ 0.25
HDAC1-203ENST00000463172 F6X3S4 739 aa16.59■□□□□ 0.25
HDAC1-203ENST00000463172 RIMBP2O15034 1052 aa16.59■□□□□ 0.25
HDAC1-203ENST00000463172 CT47B1P0C2W7 299 aaPredicted RBP16.59■□□□□ 0.25
HDAC1-203ENST00000463172 ATP2B4P23634 1241 aa16.59■□□□□ 0.25
HDAC1-203ENST00000463172 BEND3Q5T5X7 828 aa16.59■□□□□ 0.25
HDAC1-203ENST00000463172 DIEXFQ68CQ4 756 aaKnown RBP16.59■□□□□ 0.25
HDAC1-203ENST00000463172 SLC4A10Q6U841 1118 aa16.59■□□□□ 0.25
HDAC1-203ENST00000463172 MPHOSPH8Q99549 860 aa16.59■□□□□ 0.25
HDAC1-203ENST00000463172 SRCIN1Q9C0H9 1055 aa16.59■□□□□ 0.25
HDAC1-203ENST00000463172 GREM2Q9H772 168 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms