RNA–Protein interactions for RNA: ENST00000462597.1

PDLIM4-204, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 767 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-204ENST00000462597 LRRC37AA6NMS7 1700 aa23.71■■□□□ 1.39
PDLIM4-204ENST00000462597 CHADLQ6NUI6 762 aa23.71■■□□□ 1.39
PDLIM4-204ENST00000462597 DDX46Q7L014 1031 aaKnown RBP23.71■■□□□ 1.39
PDLIM4-204ENST00000462597 RIC3Q7Z5B4 369 aa23.71■■□□□ 1.39
PDLIM4-204ENST00000462597 LTBP1Q14766 1721 aa23.7■■□□□ 1.39
PDLIM4-204ENST00000462597 AOC3Q16853 763 aa23.7■■□□□ 1.38
PDLIM4-204ENST00000462597 GRIPAP1Q4V328 841 aa23.7■■□□□ 1.38
PDLIM4-204ENST00000462597 KLRG1Q96E93 195 aa23.7■■□□□ 1.38
PDLIM4-204ENST00000462597 GJA3Q9Y6H8 435 aa23.7■■□□□ 1.38
PDLIM4-204ENST00000462597 ADAMTSL1Q8N6G6 1762 aa23.7■■□□□ 1.38
PDLIM4-204ENST00000462597 PPIP5K2O43314 1243 aa23.69■■□□□ 1.38
PDLIM4-204ENST00000462597 GRAPQ13588 217 aa23.69■■□□□ 1.38
PDLIM4-204ENST00000462597 EAPPQ56P03 285 aaPredicted RBP23.69■■□□□ 1.38
PDLIM4-204ENST00000462597 GPC2Q8N158 579 aa23.69■■□□□ 1.38
PDLIM4-204ENST00000462597 GRAPLQ8TC17 118 aaPredicted RBP23.69■■□□□ 1.38
PDLIM4-204ENST00000462597 TMX4Q9H1E5 349 aaPredicted RBP23.69■■□□□ 1.38
PDLIM4-204ENST00000462597 HACL1Q9UJ83 578 aa23.69■■□□□ 1.38
PDLIM4-204ENST00000462597 DUOX1Q9NRD9 1551 aa23.69■■□□□ 1.38
PDLIM4-204ENST00000462597 VAMP4O75379 141 aa23.68■■□□□ 1.38
PDLIM4-204ENST00000462597 BBOX1O75936 387 aa23.68■■□□□ 1.38
PDLIM4-204ENST00000462597 CCDC30Q5VVM6 783 aa23.68■■□□□ 1.38
PDLIM4-204ENST00000462597 MYD88Q99836 296 aa23.68■■□□□ 1.38
PDLIM4-204ENST00000462597 EPHX2P34913 555 aa23.67■■□□□ 1.38
PDLIM4-204ENST00000462597 EIF6P56537 245 aaKnown RBP23.67■■□□□ 1.38
PDLIM4-204ENST00000462597 TRIM28Q13263 835 aaKnown RBP23.67■■□□□ 1.38
PDLIM4-204ENST00000462597 DPP8Q6V1X1 898 aaPredicted RBP23.67■■□□□ 1.38
PDLIM4-204ENST00000462597 SP8Q8IXZ3 490 aa23.67■■□□□ 1.38
PDLIM4-204ENST00000462597 LDHDQ86WU2 507 aa23.66■■□□□ 1.38
PDLIM4-204ENST00000462597 NIM1KQ8IY84 436 aa23.66■■□□□ 1.38
PDLIM4-204ENST00000462597 CHMP4AQ9BY43 222 aa23.66■■□□□ 1.38
PDLIM4-204ENST00000462597 IRS4O14654 1257 aaPredicted RBP23.65■■□□□ 1.38
PDLIM4-204ENST00000462597 MPNDQ8N594 471 aa23.65■■□□□ 1.38
PDLIM4-204ENST00000462597 CELF1Q92879 486 aaKnown RBP23.65■■□□□ 1.38
PDLIM4-204ENST00000462597 RTFDC1Q9BY42 306 aaPredicted RBP23.65■■□□□ 1.38
PDLIM4-204ENST00000462597 SF3B3Q15393 1217 aaKnown RBP23.64■■□□□ 1.37
PDLIM4-204ENST00000462597 JARID2Q92833 1246 aaPredicted RBP23.64■■□□□ 1.37
PDLIM4-204ENST00000462597 STK31Q9BXU1 1019 aa23.64■■□□□ 1.37
PDLIM4-204ENST00000462597 SUPT20HQ8NEM7 779 aa23.63■■□□□ 1.37
PDLIM4-204ENST00000462597 CLEC11AQ9Y240 323 aa23.63■■□□□ 1.37
PDLIM4-204ENST00000462597 PCNTO95613 3336 aa23.62■■□□□ 1.37
PDLIM4-204ENST00000462597 SCNN1DP51172 638 aa23.62■■□□□ 1.37
PDLIM4-204ENST00000462597 JMYQ8N9B5 988 aa23.62■■□□□ 1.37
PDLIM4-204ENST00000462597 ZBTB38Q8NAP3 1195 aaPredicted RBP23.62■■□□□ 1.37
PDLIM4-204ENST00000462597 MAP3K2Q9Y2U5 619 aa23.62■■□□□ 1.37
PDLIM4-204ENST00000462597 DDX58O95786 925 aaKnown RBP23.61■■□□□ 1.37
PDLIM4-204ENST00000462597 METTL22Q9BUU2 404 aaPredicted RBP23.61■■□□□ 1.37
PDLIM4-204ENST00000462597 PASKQ96RG2 1323 aa23.6■■□□□ 1.37
PDLIM4-204ENST00000462597 EPS15P42566 896 aa23.6■■□□□ 1.37
PDLIM4-204ENST00000462597 KIAA2012Q0VF49 1180 aa23.6■■□□□ 1.37
PDLIM4-204ENST00000462597 G2E3Q7L622 706 aa23.6■■□□□ 1.37
PDLIM4-204ENST00000462597 CCDC191Q8NCU4 936 aa23.6■■□□□ 1.37
PDLIM4-204ENST00000462597 CWC25Q9NXE8 425 aaPredicted RBP23.6■■□□□ 1.37
PDLIM4-204ENST00000462597 PI4KAP2A4QPH2 592 aa23.59■■□□□ 1.37
PDLIM4-204ENST00000462597 SLC4A2P04920 1241 aa23.59■■□□□ 1.37
PDLIM4-204ENST00000462597 CT47B1P0C2W7 299 aaPredicted RBP23.59■■□□□ 1.37
PDLIM4-204ENST00000462597 LMOD1P29536 600 aaPredicted RBP23.59■■□□□ 1.37
PDLIM4-204ENST00000462597 MAP1SQ66K74 1059 aaPredicted RBP23.59■■□□□ 1.37
PDLIM4-204ENST00000462597 TMC4Q7Z404 712 aa23.59■■□□□ 1.37
PDLIM4-204ENST00000462597 PNMA8AQ86V59 439 aaPredicted RBP23.59■■□□□ 1.37
PDLIM4-204ENST00000462597 PI4KAP1Q8N8J0 262 aa23.59■■□□□ 1.37
PDLIM4-204ENST00000462597 VPS33BQ9H267 617 aa23.59■■□□□ 1.37
PDLIM4-204ENST00000462597 SEC31BQ9NQW1 1179 aa23.59■■□□□ 1.37
PDLIM4-204ENST00000462597 ZNRF3Q9ULT6 936 aa23.59■■□□□ 1.37
PDLIM4-204ENST00000462597 ITGBL1O95965 494 aaPredicted RBP23.58■■□□□ 1.37
PDLIM4-204ENST00000462597 PCCAP05165 728 aaPredicted RBP23.58■■□□□ 1.37
PDLIM4-204ENST00000462597 CXCL9Q07325 125 aa23.58■■□□□ 1.37
PDLIM4-204ENST00000462597 CREBZFQ9NS37 354 aa23.58■■□□□ 1.37
PDLIM4-204ENST00000462597 IGKV5-2P06315 115 aa23.57■■□□□ 1.36
PDLIM4-204ENST00000462597 GPSM2P81274 684 aa23.57■■□□□ 1.36
PDLIM4-204ENST00000462597 KSR2Q6VAB6 950 aa23.57■■□□□ 1.36
PDLIM4-204ENST00000462597 CCDC85AQ96PX6 553 aaPredicted RBP23.57■■□□□ 1.36
PDLIM4-204ENST00000462597 NSFL1CQ9UNZ2 370 aaKnown RBP23.57■■□□□ 1.36
PDLIM4-204ENST00000462597 RAD17O75943 681 aa23.56■■□□□ 1.36
PDLIM4-204ENST00000462597 GPR101Q96P66 508 aaPredicted RBP23.56■■□□□ 1.36
PDLIM4-204ENST00000462597 BCL2L13Q9BXK5 485 aa23.56■■□□□ 1.36
PDLIM4-204ENST00000462597 MKRN1Q9UHC7 482 aaKnown RBP23.56■■□□□ 1.36
PDLIM4-204ENST00000462597 SPEF2Q9C093 1822 aa23.56■■□□□ 1.36
PDLIM4-204ENST00000462597 YDJCA8MPS7 323 aa23.55■■□□□ 1.36
PDLIM4-204ENST00000462597 SSH1Q8WYL5 1049 aa23.55■■□□□ 1.36
PDLIM4-204ENST00000462597 MYH3P11055 1940 aa23.55■■□□□ 1.36
PDLIM4-204ENST00000462597 PDE8AO60658 829 aa23.54■■□□□ 1.36
PDLIM4-204ENST00000462597 GMPSP49915 693 aaPredicted RBP23.54■■□□□ 1.36
PDLIM4-204ENST00000462597 RPS8P62241 208 aaKnown RBP23.54■■□□□ 1.36
PDLIM4-204ENST00000462597 CWF19L2Q2TBE0 894 aaKnown RBP23.54■■□□□ 1.36
PDLIM4-204ENST00000462597 CNTROBQ8N137 903 aa23.54■■□□□ 1.36
PDLIM4-204ENST00000462597 GPRC5DQ9NZD1 345 aa23.54■■□□□ 1.36
PDLIM4-204ENST00000462597 POLLQ9UGP5 575 aa23.54■■□□□ 1.36
PDLIM4-204ENST00000462597 C6orf229H3BNL8 230 aa23.53■■□□□ 1.36
PDLIM4-204ENST00000462597 RIMBP2O15034 1052 aa23.53■■□□□ 1.36
PDLIM4-204ENST00000462597 FLIIQ13045 1269 aa23.53■■□□□ 1.36
PDLIM4-204ENST00000462597 ALDH1L2Q3SY69 923 aa23.53■■□□□ 1.36
PDLIM4-204ENST00000462597 CCDC152Q4G0S7 254 aa23.53■■□□□ 1.36
PDLIM4-204ENST00000462597 CIAPIN1Q6FI81 312 aa23.53■■□□□ 1.36
PDLIM4-204ENST00000462597 SMC4Q9NTJ3 1288 aa23.53■■□□□ 1.36
PDLIM4-204ENST00000462597 WASHC4Q2M389 1173 aa23.52■■□□□ 1.36
PDLIM4-204ENST00000462597 MRPL50Q8N5N7 158 aaKnown RBP23.52■■□□□ 1.36
PDLIM4-204ENST00000462597 DBNDD1Q9H9R9 158 aa23.52■■□□□ 1.36
PDLIM4-204ENST00000462597 HSP90B1P14625 803 aaKnown RBP23.51■■□□□ 1.35
PDLIM4-204ENST00000462597 RARSP54136 660 aaKnown RBP23.51■■□□□ 1.35
PDLIM4-204ENST00000462597 FMR1Q06787 632 aaKnown RBP eCLIP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms