RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 LDHDQ86WU2 507 aa24.41■■□□□ 1.5
VARS-220ENST00000461874 MPNDQ8N594 471 aa24.41■■□□□ 1.5
VARS-220ENST00000461874 ZBTB38Q8NAP3 1195 aaPredicted RBP24.41■■□□□ 1.5
VARS-220ENST00000461874 SUPT20HQ8NEM7 779 aa24.41■■□□□ 1.5
VARS-220ENST00000461874 LAMB2P55268 1798 aa24.41■■□□□ 1.5
VARS-220ENST00000461874 AOC3Q16853 763 aa24.4■■□□□ 1.5
VARS-220ENST00000461874 TWISTNBQ3B726 338 aaPredicted RBP24.4■■□□□ 1.5
VARS-220ENST00000461874 NIM1KQ8IY84 436 aa24.4■■□□□ 1.5
VARS-220ENST00000461874 CCDC191Q8NCU4 936 aa24.4■■□□□ 1.5
VARS-220ENST00000461874 METTL22Q9BUU2 404 aaPredicted RBP24.4■■□□□ 1.5
VARS-220ENST00000461874 SCN4AP35499 1836 aa24.4■■□□□ 1.5
VARS-220ENST00000461874 EPHX2P34913 555 aa24.39■■□□□ 1.49
VARS-220ENST00000461874 STK31Q9BXU1 1019 aa24.39■■□□□ 1.49
VARS-220ENST00000461874 GJA3Q9Y6H8 435 aa24.39■■□□□ 1.49
VARS-220ENST00000461874 WDR63Q8IWG1 891 aa24.38■■□□□ 1.49
VARS-220ENST00000461874 CELF1Q92879 486 aaKnown RBP24.38■■□□□ 1.49
VARS-220ENST00000461874 SALL2Q9Y467 1007 aaPredicted RBP24.38■■□□□ 1.49
VARS-220ENST00000461874 HSP90B1P14625 803 aaKnown RBP24.37■■□□□ 1.49
VARS-220ENST00000461874 EAPPQ56P03 285 aaPredicted RBP24.37■■□□□ 1.49
VARS-220ENST00000461874 KSR2Q6VAB6 950 aa24.37■■□□□ 1.49
VARS-220ENST00000461874 PNMA8AQ86V59 439 aaPredicted RBP24.37■■□□□ 1.49
VARS-220ENST00000461874 CWC25Q9NXE8 425 aaPredicted RBP24.37■■□□□ 1.49
VARS-220ENST00000461874 MAP3K2Q9Y2U5 619 aa24.37■■□□□ 1.49
VARS-220ENST00000461874 DDX60Q8IY21 1712 aaKnown RBP24.37■■□□□ 1.49
VARS-220ENST00000461874 PCCAP05165 728 aaPredicted RBP24.36■■□□□ 1.49
VARS-220ENST00000461874 KIAA2012Q0VF49 1180 aa24.36■■□□□ 1.49
VARS-220ENST00000461874 FANCIQ9NVI1 1328 aa24.35■■□□□ 1.49
VARS-220ENST00000461874 PI4KAP2A4QPH2 592 aa24.35■■□□□ 1.49
VARS-220ENST00000461874 PI4KAP1Q8N8J0 262 aa24.35■■□□□ 1.49
VARS-220ENST00000461874 JMYQ8N9B5 988 aa24.35■■□□□ 1.49
VARS-220ENST00000461874 ZNRF3Q9ULT6 936 aa24.35■■□□□ 1.49
VARS-220ENST00000461874 SLC4A2P04920 1241 aa24.34■■□□□ 1.49
VARS-220ENST00000461874 SCNN1DP51172 638 aa24.34■■□□□ 1.49
VARS-220ENST00000461874 LMOD1P29536 600 aaPredicted RBP24.33■■□□□ 1.49
VARS-220ENST00000461874 RPS8P62241 208 aaKnown RBP24.33■■□□□ 1.49
VARS-220ENST00000461874 G2E3Q7L622 706 aa24.33■■□□□ 1.49
VARS-220ENST00000461874 FAM9BQ8IZU0 186 aa24.33■■□□□ 1.49
VARS-220ENST00000461874 JARID2Q92833 1246 aaPredicted RBP24.33■■□□□ 1.49
VARS-220ENST00000461874 CLEC11AQ9Y240 323 aa24.33■■□□□ 1.49
VARS-220ENST00000461874 PASKQ96RG2 1323 aa24.33■■□□□ 1.48
VARS-220ENST00000461874 TAF1P21675 1872 aa24.32■■□□□ 1.48
VARS-220ENST00000461874 IGKV5-2P06315 115 aa24.32■■□□□ 1.48
VARS-220ENST00000461874 CXCL9Q07325 125 aa24.32■■□□□ 1.48
VARS-220ENST00000461874 PDE8AO60658 829 aa24.31■■□□□ 1.48
VARS-220ENST00000461874 ITGBL1O95965 494 aaPredicted RBP24.31■■□□□ 1.48
VARS-220ENST00000461874 EPS15P42566 896 aa24.31■■□□□ 1.48
VARS-220ENST00000461874 SEC31BQ9NQW1 1179 aa24.31■■□□□ 1.48
VARS-220ENST00000461874 CREBZFQ9NS37 354 aa24.31■■□□□ 1.48
VARS-220ENST00000461874 NSFL1CQ9UNZ2 370 aaKnown RBP24.31■■□□□ 1.48
VARS-220ENST00000461874 VAMP4O75379 141 aa24.3■■□□□ 1.48
VARS-220ENST00000461874 NEXNQ0ZGT2 675 aa24.3■■□□□ 1.48
VARS-220ENST00000461874 CCDC152Q4G0S7 254 aa24.3■■□□□ 1.48
VARS-220ENST00000461874 GPSM2P81274 684 aa24.29■■□□□ 1.48
VARS-220ENST00000461874 CDHR2Q9BYE9 1310 aa24.29■■□□□ 1.48
VARS-220ENST00000461874 DUOX1Q9NRD9 1551 aa24.29■■□□□ 1.48
VARS-220ENST00000461874 COL4A1P02462 1669 aa24.28■■□□□ 1.48
VARS-220ENST00000461874 LRRC37AA6NMS7 1700 aa24.28■■□□□ 1.48
VARS-220ENST00000461874 EXOSC9Q06265 439 aaKnown RBP24.28■■□□□ 1.48
VARS-220ENST00000461874 FLIIQ13045 1269 aa24.28■■□□□ 1.48
VARS-220ENST00000461874 WASHC4Q2M389 1173 aa24.28■■□□□ 1.48
VARS-220ENST00000461874 MAP1SQ66K74 1059 aaPredicted RBP24.28■■□□□ 1.48
VARS-220ENST00000461874 CIAPIN1Q6FI81 312 aa24.28■■□□□ 1.48
VARS-220ENST00000461874 CNTROBQ8N137 903 aa24.28■■□□□ 1.48
VARS-220ENST00000461874 SPINK5Q9NQ38 1064 aaPredicted RBP24.28■■□□□ 1.48
VARS-220ENST00000461874 POLLQ9UGP5 575 aa24.28■■□□□ 1.48
VARS-220ENST00000461874 ADAMTSL1Q8N6G6 1762 aa24.28■■□□□ 1.48
VARS-220ENST00000461874 GPRC5DQ9NZD1 345 aa24.27■■□□□ 1.48
VARS-220ENST00000461874 LTBP1Q14766 1721 aa24.27■■□□□ 1.48
VARS-220ENST00000461874 YDJCA8MPS7 323 aa24.26■■□□□ 1.47
VARS-220ENST00000461874 NEURL1BA8MQ27 555 aa24.26■■□□□ 1.47
VARS-220ENST00000461874 C6orf229H3BNL8 230 aa24.26■■□□□ 1.47
VARS-220ENST00000461874 RAD17O75943 681 aa24.26■■□□□ 1.47
VARS-220ENST00000461874 TNIP1Q15025 636 aa24.26■■□□□ 1.47
VARS-220ENST00000461874 CWF19L2Q2TBE0 894 aaKnown RBP24.26■■□□□ 1.47
VARS-220ENST00000461874 USP50Q70EL3 339 aaPredicted RBP24.26■■□□□ 1.47
VARS-220ENST00000461874 CCDC85AQ96PX6 553 aaPredicted RBP24.26■■□□□ 1.47
VARS-220ENST00000461874 GMPSP49915 693 aaPredicted RBP24.25■■□□□ 1.47
VARS-220ENST00000461874 TBC1D16Q8TBP0 767 aa24.25■■□□□ 1.47
VARS-220ENST00000461874 PCNTO95613 3336 aa24.24■■□□□ 1.47
VARS-220ENST00000461874 CTSWP56202 376 aa24.24■■□□□ 1.47
VARS-220ENST00000461874 FKBP5Q13451 457 aaPredicted RBP24.24■■□□□ 1.47
VARS-220ENST00000461874 EYA3Q99504 573 aa24.24■■□□□ 1.47
VARS-220ENST00000461874 MYH16Q9H6N6 1097 aa24.24■■□□□ 1.47
VARS-220ENST00000461874 ADARB2Q9NS39 739 aaKnown RBP24.24■■□□□ 1.47
VARS-220ENST00000461874 PODXL2Q9NZ53 605 aa24.24■■□□□ 1.47
VARS-220ENST00000461874 TMEM88BA6NKF7 163 aa24.23■■□□□ 1.47
VARS-220ENST00000461874 H7C1W4 665 aa24.23■■□□□ 1.47
VARS-220ENST00000461874 RIMBP2O15034 1052 aa24.23■■□□□ 1.47
VARS-220ENST00000461874 TTLL11Q8NHH1 800 aa24.23■■□□□ 1.47
VARS-220ENST00000461874 DNAAF4Q8WXU2 420 aa24.23■■□□□ 1.47
VARS-220ENST00000461874 GCKRQ14397 625 aa24.22■■□□□ 1.47
VARS-220ENST00000461874 ANKRD18AQ8IVF6 992 aa24.22■■□□□ 1.47
VARS-220ENST00000461874 BCL2L13Q9BXK5 485 aa24.22■■□□□ 1.47
VARS-220ENST00000461874 DBNDD1Q9H9R9 158 aa24.22■■□□□ 1.47
VARS-220ENST00000461874 GPR101Q96P66 508 aaPredicted RBP24.21■■□□□ 1.47
VARS-220ENST00000461874 ANKIB1Q9P2G1 1089 aa24.21■■□□□ 1.47
VARS-220ENST00000461874 MKRN1Q9UHC7 482 aaKnown RBP24.21■■□□□ 1.47
VARS-220ENST00000461874 UBE3BQ7Z3V4 1068 aa24.2■■□□□ 1.46
VARS-220ENST00000461874 LINS1Q8NG48 757 aa24.2■■□□□ 1.46
VARS-220ENST00000461874 CDC5LQ99459 802 aaKnown RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms