RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 EPHX2P34913 555 aa11.37□□□□□ -0.59
LDB1-203ENST00000461873 CCDC27Q2M243 656 aa11.37□□□□□ -0.59
LDB1-203ENST00000461873 FAM9BQ8IZU0 186 aa11.37□□□□□ -0.59
LDB1-203ENST00000461873 KLRG1Q96E93 195 aa11.37□□□□□ -0.59
LDB1-203ENST00000461873 L3MBTL3Q96JM7 780 aaPredicted RBP11.37□□□□□ -0.59
LDB1-203ENST00000461873 BCL2L13Q9BXK5 485 aa11.37□□□□□ -0.59
LDB1-203ENST00000461873 TAF1DQ9H5J8 278 aaPredicted RBP11.37□□□□□ -0.59
LDB1-203ENST00000461873 CWC25Q9NXE8 425 aaPredicted RBP11.37□□□□□ -0.59
LDB1-203ENST00000461873 ZNF541Q9H0D2 1346 aa11.36□□□□□ -0.59
LDB1-203ENST00000461873 C6orf229H3BNL8 230 aa11.36□□□□□ -0.59
LDB1-203ENST00000461873 TNIP1Q15025 636 aa11.36□□□□□ -0.59
LDB1-203ENST00000461873 AOC3Q16853 763 aa11.36□□□□□ -0.59
LDB1-203ENST00000461873 TWISTNBQ3B726 338 aaPredicted RBP11.36□□□□□ -0.59
LDB1-203ENST00000461873 CCDC152Q4G0S7 254 aa11.36□□□□□ -0.59
LDB1-203ENST00000461873 WWC1Q8IX03 1113 aa11.36□□□□□ -0.59
LDB1-203ENST00000461873 ZBTB38Q8NAP3 1195 aaPredicted RBP11.36□□□□□ -0.59
LDB1-203ENST00000461873 CCDC191Q8NCU4 936 aa11.36□□□□□ -0.59
LDB1-203ENST00000461873 TSR2Q969E8 191 aaKnown RBP11.36□□□□□ -0.59
LDB1-203ENST00000461873 EYA3Q99504 573 aa11.36□□□□□ -0.59
LDB1-203ENST00000461873 ISCA1Q9BUE6 129 aa11.36□□□□□ -0.59
LDB1-203ENST00000461873 PHAXQ9H814 394 aaKnown RBP11.36□□□□□ -0.59
LDB1-203ENST00000461873 NSFL1CQ9UNZ2 370 aaKnown RBP11.36□□□□□ -0.59
LDB1-203ENST00000461873 HTRA3P83110 453 aa11.35□□□□□ -0.59
LDB1-203ENST00000461873 TRIM28Q13263 835 aaKnown RBP11.35□□□□□ -0.59
LDB1-203ENST00000461873 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
LDB1-203ENST00000461873 C8orf58Q8NAV2 365 aa11.35□□□□□ -0.59
LDB1-203ENST00000461873 ZNRF3Q9ULT6 936 aa11.35□□□□□ -0.59
LDB1-203ENST00000461873 POTECB2RU33 542 aa11.34□□□□□ -0.59
LDB1-203ENST00000461873 SLC4A2P04920 1241 aa11.34□□□□□ -0.59
LDB1-203ENST00000461873 SF3B3Q15393 1217 aaKnown RBP11.34□□□□□ -0.59
LDB1-203ENST00000461873 WASHC4Q2M389 1173 aa11.34□□□□□ -0.59
LDB1-203ENST00000461873 KSR2Q6VAB6 950 aa11.34□□□□□ -0.59
LDB1-203ENST00000461873 WDR63Q8IWG1 891 aa11.34□□□□□ -0.59
LDB1-203ENST00000461873 METTL22Q9BUU2 404 aaPredicted RBP11.34□□□□□ -0.59
LDB1-203ENST00000461873 MYH16Q9H6N6 1097 aa11.34□□□□□ -0.59
LDB1-203ENST00000461873 ANKIB1Q9P2G1 1089 aa11.34□□□□□ -0.59
LDB1-203ENST00000461873 MAP3K2Q9Y2U5 619 aa11.34□□□□□ -0.59
LDB1-203ENST00000461873 IL16Q14005 1332 aa11.34□□□□□ -0.59
LDB1-203ENST00000461873 PDE8AO60658 829 aa11.33□□□□□ -0.6
LDB1-203ENST00000461873 RPS8P62241 208 aaKnown RBP11.33□□□□□ -0.6
LDB1-203ENST00000461873 FKBP5Q13451 457 aaPredicted RBP11.33□□□□□ -0.6
LDB1-203ENST00000461873 CCDC184Q52MB2 194 aa11.33□□□□□ -0.6
LDB1-203ENST00000461873 CIAPIN1Q6FI81 312 aa11.33□□□□□ -0.6
LDB1-203ENST00000461873 ZC3H12CQ9C0D7 883 aaKnown RBP11.33□□□□□ -0.6
LDB1-203ENST00000461873 CREBZFQ9NS37 354 aa11.33□□□□□ -0.6
LDB1-203ENST00000461873 PI4KAP2A4QPH2 592 aa11.32□□□□□ -0.6
LDB1-203ENST00000461873 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
LDB1-203ENST00000461873 H7C1D1 291 aa11.32□□□□□ -0.6
LDB1-203ENST00000461873 RIMBP2O15034 1052 aa11.32□□□□□ -0.6
LDB1-203ENST00000461873 PCCAP05165 728 aaPredicted RBP11.32□□□□□ -0.6
LDB1-203ENST00000461873 KIAA2012Q0VF49 1180 aa11.32□□□□□ -0.6
LDB1-203ENST00000461873 USP50Q70EL3 339 aaPredicted RBP11.32□□□□□ -0.6
LDB1-203ENST00000461873 ANKRD18AQ8IVF6 992 aa11.32□□□□□ -0.6
LDB1-203ENST00000461873 CNTROBQ8N137 903 aa11.32□□□□□ -0.6
LDB1-203ENST00000461873 DNAJC5GQ8N7S2 189 aa11.32□□□□□ -0.6
LDB1-203ENST00000461873 PI4KAP1Q8N8J0 262 aa11.32□□□□□ -0.6
LDB1-203ENST00000461873 CDC5LQ99459 802 aaKnown RBP11.32□□□□□ -0.6
LDB1-203ENST00000461873 RTFDC1Q9BY42 306 aaPredicted RBP11.32□□□□□ -0.6
LDB1-203ENST00000461873 ABT1Q9ULW3 272 aaKnown RBP11.32□□□□□ -0.6
LDB1-203ENST00000461873 LAMB2P55268 1798 aa11.31□□□□□ -0.6
LDB1-203ENST00000461873 PAXIP1Q6ZW49 1069 aaPredicted RBP11.31□□□□□ -0.6
LDB1-203ENST00000461873 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
LDB1-203ENST00000461873 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
LDB1-203ENST00000461873 ADARB2Q9NS39 739 aaKnown RBP11.31□□□□□ -0.6
LDB1-203ENST00000461873 RAD17O75943 681 aa11.3□□□□□ -0.6
LDB1-203ENST00000461873 POTEIP0CG38 1075 aa11.3□□□□□ -0.6
LDB1-203ENST00000461873 POTEJP0CG39 1038 aa11.3□□□□□ -0.6
LDB1-203ENST00000461873 MAP1SQ66K74 1059 aaPredicted RBP11.3□□□□□ -0.6
LDB1-203ENST00000461873 CELF1Q92879 486 aaKnown RBP11.3□□□□□ -0.6
LDB1-203ENST00000461873 AIDAQ96BJ3 306 aa11.3□□□□□ -0.6
LDB1-203ENST00000461873 MKRN1Q9UHC7 482 aaKnown RBP11.3□□□□□ -0.6
LDB1-203ENST00000461873 GGA1Q9UJY5 639 aa11.3□□□□□ -0.6
LDB1-203ENST00000461873 UFL1O94874 794 aa11.29□□□□□ -0.6
LDB1-203ENST00000461873 IGHMBP2P38935 993 aaKnown RBP11.29□□□□□ -0.6
LDB1-203ENST00000461873 EPS15P42566 896 aa11.29□□□□□ -0.6
LDB1-203ENST00000461873 CXCL9Q07325 125 aa11.29□□□□□ -0.6
LDB1-203ENST00000461873 FLIIQ13045 1269 aa11.29□□□□□ -0.6
LDB1-203ENST00000461873 GPRC5DQ9NZD1 345 aa11.29□□□□□ -0.6
LDB1-203ENST00000461873 CDHR2Q9BYE9 1310 aa11.29□□□□□ -0.6
LDB1-203ENST00000461873 FANCIQ9NVI1 1328 aa11.29□□□□□ -0.6
LDB1-203ENST00000461873 DDX60Q8IY21 1712 aaKnown RBP11.29□□□□□ -0.6
LDB1-203ENST00000461873 CACNA1FO60840 1977 aa11.28□□□□□ -0.6
LDB1-203ENST00000461873 TAF1P21675 1872 aa11.28□□□□□ -0.6
LDB1-203ENST00000461873 GMPSP49915 693 aaPredicted RBP11.28□□□□□ -0.6
LDB1-203ENST00000461873 GPSM2P81274 684 aa11.28□□□□□ -0.6
LDB1-203ENST00000461873 EXOSC9Q06265 439 aaKnown RBP11.28□□□□□ -0.6
LDB1-203ENST00000461873 JMYQ8N9B5 988 aa11.28□□□□□ -0.6
LDB1-203ENST00000461873 DNAAF4Q8WXU2 420 aa11.28□□□□□ -0.6
LDB1-203ENST00000461873 JARID2Q92833 1246 aaPredicted RBP11.28□□□□□ -0.6
LDB1-203ENST00000461873 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
LDB1-203ENST00000461873 DBNDD1Q9H9R9 158 aa11.28□□□□□ -0.6
LDB1-203ENST00000461873 ECE2O60344 883 aa11.27□□□□□ -0.61
LDB1-203ENST00000461873 ATP2B4P23634 1241 aa11.27□□□□□ -0.61
LDB1-203ENST00000461873 KCNJ4P48050 445 aa11.27□□□□□ -0.61
LDB1-203ENST00000461873 SCNN1DP51172 638 aa11.27□□□□□ -0.61
LDB1-203ENST00000461873 CTSWP56202 376 aa11.27□□□□□ -0.61
LDB1-203ENST00000461873 DOK7Q18PE1 504 aa11.27□□□□□ -0.61
LDB1-203ENST00000461873 DEFB115Q30KQ5 88 aa11.27□□□□□ -0.61
LDB1-203ENST00000461873 UBE3BQ7Z3V4 1068 aa11.27□□□□□ -0.61
LDB1-203ENST00000461873 TBC1D16Q8TBP0 767 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms