RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
SPTAN1-204ENST00000461855 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
SPTAN1-204ENST00000461855 RTL5Q5HYW3 569 aaPredicted RBP12.96□□□□□ -0.33
SPTAN1-204ENST00000461855 TMC4Q7Z404 712 aa12.96□□□□□ -0.33
SPTAN1-204ENST00000461855 SLC51AQ86UW1 340 aa12.96□□□□□ -0.33
SPTAN1-204ENST00000461855 RTFDC1Q9BY42 306 aaPredicted RBP12.96□□□□□ -0.33
SPTAN1-204ENST00000461855 PTPRCP08575 1304 aa12.95□□□□□ -0.34
SPTAN1-204ENST00000461855 F6X3S4 739 aa12.95□□□□□ -0.34
SPTAN1-204ENST00000461855 KIF3CO14782 793 aa12.95□□□□□ -0.34
SPTAN1-204ENST00000461855 TTLL11Q8NHH1 800 aa12.95□□□□□ -0.34
SPTAN1-204ENST00000461855 CELF1Q92879 486 aaKnown RBP12.95□□□□□ -0.34
SPTAN1-204ENST00000461855 VPS33BQ9H267 617 aa12.95□□□□□ -0.34
SPTAN1-204ENST00000461855 GPBP1L1Q9HC44 474 aaPredicted RBP12.95□□□□□ -0.34
SPTAN1-204ENST00000461855 COL4A1P02462 1669 aa12.95□□□□□ -0.34
SPTAN1-204ENST00000461855 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
SPTAN1-204ENST00000461855 GLTPD2A6NH11 291 aa12.94□□□□□ -0.34
SPTAN1-204ENST00000461855 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
SPTAN1-204ENST00000461855 CSF1RP07333 972 aa12.94□□□□□ -0.34
SPTAN1-204ENST00000461855 JARID2Q92833 1246 aaPredicted RBP12.94□□□□□ -0.34
SPTAN1-204ENST00000461855 DICER1Q9UPY3 1922 aaKnown RBP12.94□□□□□ -0.34
SPTAN1-204ENST00000461855 IARSP41252 1262 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-204ENST00000461855 CTSWP56202 376 aa12.93□□□□□ -0.34
SPTAN1-204ENST00000461855 RPS8P62241 208 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-204ENST00000461855 HNRNPUQ00839 825 aaKnown RBP eCLIP12.93□□□□□ -0.34
SPTAN1-204ENST00000461855 CCDC152Q4G0S7 254 aa12.93□□□□□ -0.34
SPTAN1-204ENST00000461855 ZNF277Q9NRM2 450 aaPredicted RBP12.93□□□□□ -0.34
SPTAN1-204ENST00000461855 UTYO14607 1347 aa12.92□□□□□ -0.34
SPTAN1-204ENST00000461855 ZBED9Q6R2W3 1325 aa12.92□□□□□ -0.34
SPTAN1-204ENST00000461855 FZD9O00144 591 aa12.92□□□□□ -0.34
SPTAN1-204ENST00000461855 RARSP54136 660 aaKnown RBP12.92□□□□□ -0.34
SPTAN1-204ENST00000461855 UBE3BQ7Z3V4 1068 aa12.92□□□□□ -0.34
SPTAN1-204ENST00000461855 SEC31BQ9NQW1 1179 aa12.92□□□□□ -0.34
SPTAN1-204ENST00000461855 KDM2BQ8NHM5 1336 aa12.91□□□□□ -0.34
SPTAN1-204ENST00000461855 CCDC88AQ3V6T2 1871 aa12.91□□□□□ -0.34
SPTAN1-204ENST00000461855 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
SPTAN1-204ENST00000461855 POTECB2RU33 542 aa12.91□□□□□ -0.34
SPTAN1-204ENST00000461855 MPNDQ8N594 471 aa12.91□□□□□ -0.34
SPTAN1-204ENST00000461855 SRCIN1Q9C0H9 1055 aa12.91□□□□□ -0.34
SPTAN1-204ENST00000461855 NMRK2Q9NPI5 230 aa12.91□□□□□ -0.34
SPTAN1-204ENST00000461855 PODXL2Q9NZ53 605 aa12.91□□□□□ -0.34
SPTAN1-204ENST00000461855 COL4A5P29400 1685 aa12.9□□□□□ -0.34
SPTAN1-204ENST00000461855 GRM8O00222 908 aa12.9□□□□□ -0.34
SPTAN1-204ENST00000461855 FOXO4P98177 505 aa12.9□□□□□ -0.34
SPTAN1-204ENST00000461855 DPP8Q6V1X1 898 aaPredicted RBP12.9□□□□□ -0.34
SPTAN1-204ENST00000461855 SUPT20HQ8NEM7 779 aa12.9□□□□□ -0.34
SPTAN1-204ENST00000461855 ZNF526Q8TF50 670 aaPredicted RBP12.9□□□□□ -0.34
SPTAN1-204ENST00000461855 BCL2L13Q9BXK5 485 aa12.9□□□□□ -0.34
SPTAN1-204ENST00000461855 GREM2Q9H772 168 aa12.9□□□□□ -0.34
SPTAN1-204ENST00000461855 TAF1P21675 1872 aa12.9□□□□□ -0.34
SPTAN1-204ENST00000461855 DUOX1Q9NRD9 1551 aa12.9□□□□□ -0.35
SPTAN1-204ENST00000461855 TIAM2Q8IVF5 1701 aa12.89□□□□□ -0.35
SPTAN1-204ENST00000461855 C1QTNF8P60827 252 aa12.89□□□□□ -0.35
SPTAN1-204ENST00000461855 KIAA2012Q0VF49 1180 aa12.89□□□□□ -0.35
SPTAN1-204ENST00000461855 DPY19L2Q6NUT2 758 aa12.89□□□□□ -0.35
SPTAN1-204ENST00000461855 ARHGAP45Q92619 1136 aa12.89□□□□□ -0.35
SPTAN1-204ENST00000461855 KAZALD1Q96I82 304 aa12.89□□□□□ -0.35
SPTAN1-204ENST00000461855 L3MBTL3Q96JM7 780 aaPredicted RBP12.89□□□□□ -0.35
SPTAN1-204ENST00000461855 TMX4Q9H1E5 349 aaPredicted RBP12.89□□□□□ -0.35
SPTAN1-204ENST00000461855 SMC4Q9NTJ3 1288 aa12.89□□□□□ -0.35
SPTAN1-204ENST00000461855 LTBP1Q14766 1721 aa12.88□□□□□ -0.35
SPTAN1-204ENST00000461855 GPSM2P81274 684 aa12.88□□□□□ -0.35
SPTAN1-204ENST00000461855 SLC4A10Q6U841 1118 aa12.88□□□□□ -0.35
SPTAN1-204ENST00000461855 ANKRD18AQ8IVF6 992 aa12.88□□□□□ -0.35
SPTAN1-204ENST00000461855 CDC5LQ99459 802 aaKnown RBP12.88□□□□□ -0.35
SPTAN1-204ENST00000461855 BSDC1Q9NW68 430 aaPredicted RBP12.88□□□□□ -0.35
SPTAN1-204ENST00000461855 POLLQ9UGP5 575 aa12.88□□□□□ -0.35
SPTAN1-204ENST00000461855 NOB1Q9ULX3 412 aaKnown RBP12.88□□□□□ -0.35
SPTAN1-204ENST00000461855 WDR90Q96KV7 1748 aa12.88□□□□□ -0.35
SPTAN1-204ENST00000461855 TOMM70O94826 608 aa12.87□□□□□ -0.35
SPTAN1-204ENST00000461855 DDNO94850 711 aaPredicted RBP12.87□□□□□ -0.35
SPTAN1-204ENST00000461855 NBPF7P0C2Y1 421 aaPredicted RBP12.87□□□□□ -0.35
SPTAN1-204ENST00000461855 VEGFAP15692 232 aaPredicted RBP12.87□□□□□ -0.35
SPTAN1-204ENST00000461855 EPHA10Q5JZY3 1008 aa12.87□□□□□ -0.35
SPTAN1-204ENST00000461855 JDP2Q8WYK2 163 aa12.87□□□□□ -0.35
SPTAN1-204ENST00000461855 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
SPTAN1-204ENST00000461855 USP44Q9H0E7 712 aa12.87□□□□□ -0.35
SPTAN1-204ENST00000461855 RRAGCQ9HB90 399 aa12.87□□□□□ -0.35
SPTAN1-204ENST00000461855 NSFL1CQ9UNZ2 370 aaKnown RBP12.87□□□□□ -0.35
SPTAN1-204ENST00000461855 ZNF541Q9H0D2 1346 aa12.87□□□□□ -0.35
SPTAN1-204ENST00000461855 PPIP5K2O43314 1243 aa12.86□□□□□ -0.35
SPTAN1-204ENST00000461855 ITGA6P23229 1130 aa12.86□□□□□ -0.35
SPTAN1-204ENST00000461855 AOC3Q16853 763 aa12.86□□□□□ -0.35
SPTAN1-204ENST00000461855 RABL6Q3YEC7 729 aaPredicted RBP12.86□□□□□ -0.35
SPTAN1-204ENST00000461855 LARGE2Q8N3Y3 721 aa12.86□□□□□ -0.35
SPTAN1-204ENST00000461855 TBC1D16Q8TBP0 767 aa12.86□□□□□ -0.35
SPTAN1-204ENST00000461855 API5Q9BZZ5 524 aaKnown RBP12.86□□□□□ -0.35
SPTAN1-204ENST00000461855 C9orf78Q9NZ63 289 aaPredicted RBP12.86□□□□□ -0.35
SPTAN1-204ENST00000461855 MINPP1Q9UNW1 487 aa12.86□□□□□ -0.35
SPTAN1-204ENST00000461855 MYH3P11055 1940 aa12.86□□□□□ -0.35
SPTAN1-204ENST00000461855 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
SPTAN1-204ENST00000461855 GPC2Q8N158 579 aa12.85□□□□□ -0.35
SPTAN1-204ENST00000461855 ZNRF3Q9ULT6 936 aa12.85□□□□□ -0.35
SPTAN1-204ENST00000461855 KIF16BQ96L93 1317 aa12.85□□□□□ -0.35
SPTAN1-204ENST00000461855 CCT4P50991 539 aaKnown RBP12.84□□□□□ -0.35
SPTAN1-204ENST00000461855 WASHC4Q2M389 1173 aa12.84□□□□□ -0.35
SPTAN1-204ENST00000461855 INTS3Q68E01 1043 aaKnown RBP12.84□□□□□ -0.35
SPTAN1-204ENST00000461855 LMBR1LQ6UX01 489 aa12.84□□□□□ -0.35
SPTAN1-204ENST00000461855 NIM1KQ8IY84 436 aa12.84□□□□□ -0.35
SPTAN1-204ENST00000461855 RBM46Q8TBY0 533 aaKnown RBP12.84□□□□□ -0.35
SPTAN1-204ENST00000461855 SUCLG2Q96I99 432 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms