RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 LAMB4A4D0S4 1761 aa12.53□□□□□ -0.4
NECTIN3-202ENST00000461477 MKI67P46013 3256 aaKnown RBP12.52□□□□□ -0.4
NECTIN3-202ENST00000461477 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.41
NECTIN3-202ENST00000461477 U2SURPO15042 1029 aaKnown RBP12.52□□□□□ -0.41
NECTIN3-202ENST00000461477 CRY2Q49AN0 593 aa12.52□□□□□ -0.41
NECTIN3-202ENST00000461477 C3orf67Q6ZVT6 689 aa12.52□□□□□ -0.41
NECTIN3-202ENST00000461477 NUTM1Q86Y26 1132 aa12.52□□□□□ -0.41
NECTIN3-202ENST00000461477 ZIC5Q96T25 663 aa12.52□□□□□ -0.41
NECTIN3-202ENST00000461477 PSMD1Q99460 953 aa12.52□□□□□ -0.41
NECTIN3-202ENST00000461477 TLL2Q9Y6L7 1015 aa12.52□□□□□ -0.41
NECTIN3-202ENST00000461477 KIF7Q2M1P5 1343 aa12.52□□□□□ -0.41
NECTIN3-202ENST00000461477 PAXIP1Q6ZW49 1069 aaPredicted RBP12.51□□□□□ -0.41
NECTIN3-202ENST00000461477 MCM10Q7L590 875 aa12.51□□□□□ -0.41
NECTIN3-202ENST00000461477 GAS2L2Q8NHY3 880 aa12.51□□□□□ -0.41
NECTIN3-202ENST00000461477 MCOLN1Q9GZU1 580 aa12.51□□□□□ -0.41
NECTIN3-202ENST00000461477 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
NECTIN3-202ENST00000461477 DCTN1Q14203 1278 aa12.5□□□□□ -0.41
NECTIN3-202ENST00000461477 DLK2Q6UY11 383 aa12.5□□□□□ -0.41
NECTIN3-202ENST00000461477 TPTE2Q6XPS3 522 aa12.5□□□□□ -0.41
NECTIN3-202ENST00000461477 RSPH6AQ9H0K4 717 aa12.5□□□□□ -0.41
NECTIN3-202ENST00000461477 CENPFP49454 3210 aa12.49□□□□□ -0.41
NECTIN3-202ENST00000461477 HTTP42858 3142 aa12.49□□□□□ -0.41
NECTIN3-202ENST00000461477 RIC1Q4ADV7 1423 aa12.49□□□□□ -0.41
NECTIN3-202ENST00000461477 UBN2Q6ZU65 1347 aa12.49□□□□□ -0.41
NECTIN3-202ENST00000461477 TAF1P21675 1872 aa12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 LAMB2P55268 1798 aa12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 SHTN1A0MZ66 631 aa12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 TCERG1O14776 1098 aaKnown RBP12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 SNRPA1P09661 255 aaKnown RBP12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 ALDH1B1P30837 517 aa12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 PRKAR2BP31323 418 aa12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 EIF6P56537 245 aaKnown RBP12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 SAPCD2Q86UD0 394 aa12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 JDP2Q8WYK2 163 aa12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 GLIS2Q9BZE0 524 aaPredicted RBP12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 MIS18AQ9NYP9 233 aa12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
NECTIN3-202ENST00000461477 DLG5Q8TDM6 1919 aa12.47□□□□□ -0.41
NECTIN3-202ENST00000461477 BRCA2P51587 3418 aa12.47□□□□□ -0.41
NECTIN3-202ENST00000461477 HOXA10P31260 410 aaPredicted RBP12.47□□□□□ -0.41
NECTIN3-202ENST00000461477 ECE1P42892 770 aa12.47□□□□□ -0.41
NECTIN3-202ENST00000461477 HIRAP54198 1017 aaPredicted RBP12.47□□□□□ -0.41
NECTIN3-202ENST00000461477 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
NECTIN3-202ENST00000461477 USP50Q70EL3 339 aaPredicted RBP12.47□□□□□ -0.41
NECTIN3-202ENST00000461477 NPM2Q86SE8 214 aaKnown RBP12.47□□□□□ -0.41
NECTIN3-202ENST00000461477 LMOD1P29536 600 aaPredicted RBP12.46□□□□□ -0.41
NECTIN3-202ENST00000461477 AOC3Q16853 763 aa12.46□□□□□ -0.41
NECTIN3-202ENST00000461477 SUSD4Q5VX71 490 aa12.46□□□□□ -0.41
NECTIN3-202ENST00000461477 CIAPIN1Q6FI81 312 aa12.46□□□□□ -0.41
NECTIN3-202ENST00000461477 LARGE2Q8N3Y3 721 aa12.46□□□□□ -0.41
NECTIN3-202ENST00000461477 NGEFQ8N5V2 710 aa12.46□□□□□ -0.41
NECTIN3-202ENST00000461477 RNF25Q96BH1 459 aaPredicted RBP12.46□□□□□ -0.41
NECTIN3-202ENST00000461477 GPRC5DQ9NZD1 345 aa12.46□□□□□ -0.41
NECTIN3-202ENST00000461477 POLR2AP24928 1970 aaKnown RBP12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 RGL2O15211 777 aa12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 CELF2O95319 508 aaKnown RBP12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 GPTP24298 496 aa12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 MAP2K2P36507 400 aa12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 GMPSP49915 693 aaPredicted RBP12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 CXCL9Q07325 125 aa12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 PDCD7Q8N8D1 485 aaKnown RBP12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 TRPM4Q8TD43 1214 aa12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 TAOK2Q9UL54 1235 aa12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 COL4A1P02462 1669 aa12.45□□□□□ -0.42
NECTIN3-202ENST00000461477 NPC1L1Q9UHC9 1359 aa12.44□□□□□ -0.42
NECTIN3-202ENST00000461477 DUOX1Q9NRD9 1551 aa12.44□□□□□ -0.42
NECTIN3-202ENST00000461477 PPEF1O14829 653 aaPredicted RBP12.44□□□□□ -0.42
NECTIN3-202ENST00000461477 DGKZQ13574 1117 aa12.44□□□□□ -0.42
NECTIN3-202ENST00000461477 BEGAINQ9BUH8 593 aa12.44□□□□□ -0.42
NECTIN3-202ENST00000461477 ADARB2Q9NS39 739 aaKnown RBP12.44□□□□□ -0.42
NECTIN3-202ENST00000461477 PCDH10Q9P2E7 1040 aa12.44□□□□□ -0.42
NECTIN3-202ENST00000461477 PGAP2Q9UHJ9 254 aa12.44□□□□□ -0.42
NECTIN3-202ENST00000461477 PPIP5K2O43314 1243 aa12.43□□□□□ -0.42
NECTIN3-202ENST00000461477 NTSR2O95665 410 aa12.43□□□□□ -0.42
NECTIN3-202ENST00000461477 GTF2E1P29083 439 aaPredicted RBP12.43□□□□□ -0.42
NECTIN3-202ENST00000461477 BRPF1P55201 1214 aaPredicted RBP12.43□□□□□ -0.42
NECTIN3-202ENST00000461477 MAP3K15Q6ZN16 1313 aa12.42□□□□□ -0.42
NECTIN3-202ENST00000461477 CC2D2BQ6DHV5 1058 aa12.42□□□□□ -0.42
NECTIN3-202ENST00000461477 NIM1KQ8IY84 436 aa12.42□□□□□ -0.42
NECTIN3-202ENST00000461477 ZNF34Q8IZ26 560 aa12.42□□□□□ -0.42
NECTIN3-202ENST00000461477 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
NECTIN3-202ENST00000461477 CRAMP1Q96RY5 1269 aa12.42□□□□□ -0.42
NECTIN3-202ENST00000461477 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
NECTIN3-202ENST00000461477 ZNF408Q9H9D4 720 aa12.42□□□□□ -0.42
NECTIN3-202ENST00000461477 ANKRD36CQ5JPF3 1778 aa12.41□□□□□ -0.42
NECTIN3-202ENST00000461477 YDJCA8MPS7 323 aa12.41□□□□□ -0.42
NECTIN3-202ENST00000461477 FAM155AB1AL88 458 aaPredicted RBP12.41□□□□□ -0.42
NECTIN3-202ENST00000461477 ERVV-1B6SEH8 477 aa12.41□□□□□ -0.42
NECTIN3-202ENST00000461477 EGFRP00533 1210 aa12.41□□□□□ -0.42
NECTIN3-202ENST00000461477 SOX10P56693 466 aa12.41□□□□□ -0.42
NECTIN3-202ENST00000461477 SLAIN1Q8ND83 568 aa12.41□□□□□ -0.42
NECTIN3-202ENST00000461477 HHIPL1Q96JK4 782 aa12.41□□□□□ -0.42
NECTIN3-202ENST00000461477 NYXQ9GZU5 481 aa12.41□□□□□ -0.42
NECTIN3-202ENST00000461477 IBTKQ9P2D0 1353 aaPredicted RBP12.41□□□□□ -0.42
NECTIN3-202ENST00000461477 ABCC4O15439 1325 aa12.4□□□□□ -0.42
NECTIN3-202ENST00000461477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.4□□□□□ -0.42
NECTIN3-202ENST00000461477 RAD17O75943 681 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms