RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 HLFQ16534 295 aa8.28□□□□□ -1.08
MSH2-204ENST00000461394 CCDC57Q2TAC2 916 aa8.28□□□□□ -1.08
MSH2-204ENST00000461394 FAM89AQ96GI7 184 aa8.28□□□□□ -1.08
MSH2-204ENST00000461394 CCDC85AQ96PX6 553 aaPredicted RBP8.28□□□□□ -1.08
MSH2-204ENST00000461394 ANP32EQ9BTT0 268 aa8.28□□□□□ -1.08
MSH2-204ENST00000461394 ECHDC1Q9NTX5 307 aa8.28□□□□□ -1.08
MSH2-204ENST00000461394 TRPC5Q9UL62 973 aaPredicted RBP8.28□□□□□ -1.08
MSH2-204ENST00000461394 SASH1O94885 1247 aa8.27□□□□□ -1.09
MSH2-204ENST00000461394 RBM25P49756 843 aaKnown RBP8.27□□□□□ -1.09
MSH2-204ENST00000461394 CASP7P55210 303 aa8.27□□□□□ -1.09
MSH2-204ENST00000461394 FOXO4P98177 505 aa8.27□□□□□ -1.09
MSH2-204ENST00000461394 TFCP2Q12800 502 aa8.27□□□□□ -1.09
MSH2-204ENST00000461394 ITPK1Q13572 414 aa8.27□□□□□ -1.09
MSH2-204ENST00000461394 RABL6Q3YEC7 729 aaPredicted RBP8.27□□□□□ -1.09
MSH2-204ENST00000461394 FAM182BQ5T319 152 aa8.27□□□□□ -1.09
MSH2-204ENST00000461394 ZBTB38Q8NAP3 1195 aaPredicted RBP8.27□□□□□ -1.09
MSH2-204ENST00000461394 GJD4Q96KN9 370 aaPredicted RBP8.27□□□□□ -1.09
MSH2-204ENST00000461394 COPRSQ9NQ92 184 aa8.27□□□□□ -1.09
MSH2-204ENST00000461394 DIAPH3Q9NSV4 1193 aa8.27□□□□□ -1.09
MSH2-204ENST00000461394 TRMT112Q9UI30 125 aaKnown RBP8.27□□□□□ -1.09
MSH2-204ENST00000461394 CICQ96RK0 1608 aaPredicted RBP8.27□□□□□ -1.09
MSH2-204ENST00000461394 RREB1Q92766 1687 aa8.27□□□□□ -1.09
MSH2-204ENST00000461394 SBF2Q86WG5 1849 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 BCORQ6W2J9 1755 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 ERVV-1B6SEH8 477 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 HSP90AA1P07900 732 aaKnown RBP8.26□□□□□ -1.09
MSH2-204ENST00000461394 CHMLP26374 656 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 RFX5P48382 616 aaPredicted RBP8.26□□□□□ -1.09
MSH2-204ENST00000461394 PTPN12Q05209 780 aaKnown RBP8.26□□□□□ -1.09
MSH2-204ENST00000461394 INTS5Q6P9B9 1019 aaKnown RBP8.26□□□□□ -1.09
MSH2-204ENST00000461394 KIAA1211Q6ZU35 1233 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 NLRP10Q86W26 655 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 PI4K2BQ8TCG2 481 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 ZC3H15Q8WU90 426 aaKnown RBP8.26□□□□□ -1.09
MSH2-204ENST00000461394 RUFY2Q8WXA3 655 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 ZNF594Q96JF6 807 aaPredicted RBP8.26□□□□□ -1.09
MSH2-204ENST00000461394 NEUROD6Q96NK8 337 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 ESYT1Q9BSJ8 1104 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 ANO2Q9NQ90 1003 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 PODXL2Q9NZ53 605 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 ZNF652Q9Y2D9 606 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 ZNF831Q5JPB2 1677 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 SPEF2Q9C093 1822 aa8.26□□□□□ -1.09
MSH2-204ENST00000461394 USP42Q9H9J4 1324 aaKnown RBP8.26□□□□□ -1.09
MSH2-204ENST00000461394 MYH14Q7Z406 1995 aaKnown RBP8.25□□□□□ -1.09
MSH2-204ENST00000461394 ANKRD18BA2A2Z9 1011 aa8.25□□□□□ -1.09
MSH2-204ENST00000461394 IRS4O14654 1257 aaPredicted RBP8.25□□□□□ -1.09
MSH2-204ENST00000461394 IL15P40933 162 aaPredicted RBP8.25□□□□□ -1.09
MSH2-204ENST00000461394 TRIM28Q13263 835 aaKnown RBP8.25□□□□□ -1.09
MSH2-204ENST00000461394 IFIT5Q13325 482 aaKnown RBP8.25□□□□□ -1.09
MSH2-204ENST00000461394 TNNI3KQ59H18 835 aa8.25□□□□□ -1.09
MSH2-204ENST00000461394 GORABQ5T7V8 394 aa8.25□□□□□ -1.09
MSH2-204ENST00000461394 SEPT12Q8IYM1 358 aa8.25□□□□□ -1.09
MSH2-204ENST00000461394 EAF2Q96CJ1 260 aaPredicted RBP8.25□□□□□ -1.09
MSH2-204ENST00000461394 EVI5LQ96CN4 794 aa8.25□□□□□ -1.09
MSH2-204ENST00000461394 FSD1Q9BTV5 496 aa8.25□□□□□ -1.09
MSH2-204ENST00000461394 TBC1D2Q9BYX2 928 aa8.25□□□□□ -1.09
MSH2-204ENST00000461394 SLKQ9H2G2 1235 aaPredicted RBP8.25□□□□□ -1.09
MSH2-204ENST00000461394 BOLA2Q9H3K6 86 aa8.25□□□□□ -1.09
MSH2-204ENST00000461394 QTRT2Q9H974 415 aaKnown RBP8.25□□□□□ -1.09
MSH2-204ENST00000461394 TLR7Q9NYK1 1049 aaKnown RBP8.25□□□□□ -1.09
MSH2-204ENST00000461394 CCNL1Q9UK58 526 aaPredicted RBP8.25□□□□□ -1.09
MSH2-204ENST00000461394 FPGT-TNNI3KV9GXZ4 949 aa8.25□□□□□ -1.09
MSH2-204ENST00000461394 ATRNO75882 1429 aa8.25□□□□□ -1.09
MSH2-204ENST00000461394 CDHR2Q9BYE9 1310 aa8.25□□□□□ -1.09
MSH2-204ENST00000461394 EYA2O00167 538 aa8.24□□□□□ -1.09
MSH2-204ENST00000461394 HIP1O00291 1037 aa8.24□□□□□ -1.09
MSH2-204ENST00000461394 PDE8AO60658 829 aa8.24□□□□□ -1.09
MSH2-204ENST00000461394 HSP90B1P14625 803 aaKnown RBP8.24□□□□□ -1.09
MSH2-204ENST00000461394 EIF5P55010 431 aaKnown RBP8.24□□□□□ -1.09
MSH2-204ENST00000461394 KCNQ4P56696 695 aa8.24□□□□□ -1.09
MSH2-204ENST00000461394 RABEP1Q15276 862 aa8.24□□□□□ -1.09
MSH2-204ENST00000461394 CWC27Q6UX04 472 aaKnown RBP8.24□□□□□ -1.09
MSH2-204ENST00000461394 LINC00116Q8NCU8 138 aa8.24□□□□□ -1.09
MSH2-204ENST00000461394 DNAJC2Q99543 621 aaKnown RBP8.24□□□□□ -1.09
MSH2-204ENST00000461394 UTP14AQ9BVJ6 771 aaKnown RBP8.24□□□□□ -1.09
MSH2-204ENST00000461394 USP26Q9BXU7 913 aa8.24□□□□□ -1.09
MSH2-204ENST00000461394 CNNM1Q9NRU3 951 aa8.24□□□□□ -1.09
MSH2-204ENST00000461394 CEP126Q9P2H0 1117 aa8.24□□□□□ -1.09
MSH2-204ENST00000461394 NIP7Q9Y221 180 aaKnown RBP eCLIP8.24□□□□□ -1.09
MSH2-204ENST00000461394 BRWD3Q6RI45 1802 aa8.24□□□□□ -1.09
MSH2-204ENST00000461394 LAMB2P55268 1798 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 GNPATO15228 680 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 NPHP1O15259 732 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 CIAO1O76071 339 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 CAMTA2O94983 1202 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 GTF2E1P29083 439 aaPredicted RBP8.23□□□□□ -1.09
MSH2-204ENST00000461394 KCNJ4P48050 445 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 CTSWP56202 376 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 LRRC24Q50LG9 513 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 PARP10Q53GL7 1025 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 METTL24Q5JXM2 366 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 BICDL1Q6ZP65 573 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 ZNF34Q8IZ26 560 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 SYNE4Q8N205 404 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 ARHGEF1Q92888 912 aaKnown RBP8.23□□□□□ -1.09
MSH2-204ENST00000461394 DBNDD2Q9BQY9 259 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 PLA2G12BQ9BX93 195 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 AKAP2Q9Y2D5 859 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 TAF1LQ8IZX4 1826 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms