RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 FOXN1O15353 648 aa18.13■□□□□ 0.49
COL5A3-202ENST00000461214 PCCAP05165 728 aaPredicted RBP18.13■□□□□ 0.49
COL5A3-202ENST00000461214 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
COL5A3-202ENST00000461214 ZBTB38Q8NAP3 1195 aaPredicted RBP18.13■□□□□ 0.49
COL5A3-202ENST00000461214 SH3TC1Q8TE82 1336 aa18.13■□□□□ 0.49
COL5A3-202ENST00000461214 SBF1O95248 1867 aa18.12■□□□□ 0.49
COL5A3-202ENST00000461214 DDR1Q08345 913 aa18.12■□□□□ 0.49
COL5A3-202ENST00000461214 BICDL1Q6ZP65 573 aa18.12■□□□□ 0.49
COL5A3-202ENST00000461214 UTP14AQ9BVJ6 771 aaKnown RBP18.12■□□□□ 0.49
COL5A3-202ENST00000461214 HDAC5Q9UQL6 1122 aa18.12■□□□□ 0.49
COL5A3-202ENST00000461214 COG6Q9Y2V7 657 aa18.12■□□□□ 0.49
COL5A3-202ENST00000461214 LRRC37AA6NMS7 1700 aa18.12■□□□□ 0.49
COL5A3-202ENST00000461214 GLTPD2A6NH11 291 aa18.11■□□□□ 0.49
COL5A3-202ENST00000461214 GNAI3P08754 354 aa18.11■□□□□ 0.49
COL5A3-202ENST00000461214 HSP90B1P14625 803 aaKnown RBP18.11■□□□□ 0.49
COL5A3-202ENST00000461214 AAMPQ13685 434 aa18.11■□□□□ 0.49
COL5A3-202ENST00000461214 SUSD4Q5VX71 490 aa18.11■□□□□ 0.49
COL5A3-202ENST00000461214 NBPF5PQ86XG9 351 aaPredicted RBP18.11■□□□□ 0.49
COL5A3-202ENST00000461214 CNBD1Q8NA66 436 aa18.11■□□□□ 0.49
COL5A3-202ENST00000461214 C9orf78Q9NZ63 289 aaPredicted RBP18.11■□□□□ 0.49
COL5A3-202ENST00000461214 ABCC12Q96J65 1359 aa18.1■□□□□ 0.49
COL5A3-202ENST00000461214 TPTE2Q6XPS3 522 aa18.1■□□□□ 0.49
COL5A3-202ENST00000461214 USP44Q9H0E7 712 aa18.1■□□□□ 0.49
COL5A3-202ENST00000461214 TRMT112Q9UI30 125 aaKnown RBP18.1■□□□□ 0.49
COL5A3-202ENST00000461214 H7C1W4 665 aa18.09■□□□□ 0.49
COL5A3-202ENST00000461214 SERPINB2P05120 415 aa18.09■□□□□ 0.49
COL5A3-202ENST00000461214 NEFLP07196 543 aa18.09■□□□□ 0.49
COL5A3-202ENST00000461214 UBTFL1P0CB47 393 aaPredicted RBP18.09■□□□□ 0.49
COL5A3-202ENST00000461214 UBE3BQ7Z3V4 1068 aa18.09■□□□□ 0.49
COL5A3-202ENST00000461214 CASP7P55210 303 aa18.08■□□□□ 0.48
COL5A3-202ENST00000461214 ST5P78524 1137 aa18.08■□□□□ 0.48
COL5A3-202ENST00000461214 AIDAQ96BJ3 306 aa18.08■□□□□ 0.48
COL5A3-202ENST00000461214 MEIS3Q99687 375 aa18.08■□□□□ 0.48
COL5A3-202ENST00000461214 ZBTB7BO15156 539 aaPredicted RBP18.07■□□□□ 0.48
COL5A3-202ENST00000461214 NPHP1O15259 732 aa18.07■□□□□ 0.48
COL5A3-202ENST00000461214 LMNB1P20700 586 aa18.07■□□□□ 0.48
COL5A3-202ENST00000461214 PRR5LQ6MZQ0 368 aa18.07■□□□□ 0.48
COL5A3-202ENST00000461214 CRBNQ96SW2 442 aa18.07■□□□□ 0.48
COL5A3-202ENST00000461214 PLA2G12BQ9BX93 195 aa18.07■□□□□ 0.48
COL5A3-202ENST00000461214 PRDM10Q9NQV6 1147 aa18.07■□□□□ 0.48
COL5A3-202ENST00000461214 NBPF7P0C2Y1 421 aaPredicted RBP18.06■□□□□ 0.48
COL5A3-202ENST00000461214 GTF2E1P29083 439 aaPredicted RBP18.06■□□□□ 0.48
COL5A3-202ENST00000461214 FAM89AQ96GI7 184 aa18.06■□□□□ 0.48
COL5A3-202ENST00000461214 CREBZFQ9NS37 354 aa18.06■□□□□ 0.48
COL5A3-202ENST00000461214 ZC3H4Q9UPT8 1303 aaKnown RBP18.05■□□□□ 0.48
COL5A3-202ENST00000461214 FAM177BA6PVY3 158 aa18.05■□□□□ 0.48
COL5A3-202ENST00000461214 CTCFP49711 727 aaPredicted RBP18.05■□□□□ 0.48
COL5A3-202ENST00000461214 SLC10A5Q5PT55 438 aa18.05■□□□□ 0.48
COL5A3-202ENST00000461214 ZBTB40Q9NUA8 1239 aa18.05■□□□□ 0.48
COL5A3-202ENST00000461214 RTL9Q8NET4 1388 aa18.04■□□□□ 0.48
COL5A3-202ENST00000461214 IRS4O14654 1257 aaPredicted RBP18.04■□□□□ 0.48
COL5A3-202ENST00000461214 PDE8AO60658 829 aa18.04■□□□□ 0.48
COL5A3-202ENST00000461214 GNAI2P04899 355 aa18.04■□□□□ 0.48
COL5A3-202ENST00000461214 ERFEQ4G0M1 354 aa18.04■□□□□ 0.48
COL5A3-202ENST00000461214 NUTM1Q86Y26 1132 aa18.04■□□□□ 0.48
COL5A3-202ENST00000461214 PCDH10Q9P2E7 1040 aa18.04■□□□□ 0.48
COL5A3-202ENST00000461214 ARAP2Q8WZ64 1704 aa18.03■□□□□ 0.48
COL5A3-202ENST00000461214 POTECB2RU33 542 aa18.03■□□□□ 0.48
COL5A3-202ENST00000461214 LBX1P52954 281 aa18.03■□□□□ 0.48
COL5A3-202ENST00000461214 CTSWP56202 376 aa18.02■□□□□ 0.48
COL5A3-202ENST00000461214 LTBP1Q14766 1721 aa18.02■□□□□ 0.48
COL5A3-202ENST00000461214 RABL6Q3YEC7 729 aaPredicted RBP18.02■□□□□ 0.48
COL5A3-202ENST00000461214 TIAM2Q8IVF5 1701 aa18.02■□□□□ 0.48
COL5A3-202ENST00000461214 ABHD8Q96I13 439 aa18.02■□□□□ 0.48
COL5A3-202ENST00000461214 SUCLG2Q96I99 432 aa18.02■□□□□ 0.48
COL5A3-202ENST00000461214 BRIP1Q9BX63 1249 aa18.02■□□□□ 0.48
COL5A3-202ENST00000461214 PDZRN3Q9UPQ7 1066 aa18.02■□□□□ 0.48
COL5A3-202ENST00000461214 SLX4Q8IY92 1834 aa18.01■□□□□ 0.47
COL5A3-202ENST00000461214 MTX1Q13505 466 aa18.01■□□□□ 0.47
COL5A3-202ENST00000461214 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
COL5A3-202ENST00000461214 CHADLQ6NUI6 762 aa18.01■□□□□ 0.47
COL5A3-202ENST00000461214 DPY19L2Q6NUT2 758 aa18.01■□□□□ 0.47
COL5A3-202ENST00000461214 KAZALD1Q96I82 304 aa18.01■□□□□ 0.47
COL5A3-202ENST00000461214 LRRFIP2Q9Y608 721 aaKnown RBP18.01■□□□□ 0.47
COL5A3-202ENST00000461214 MYH13Q9UKX3 1938 aa18■□□□□ 0.47
COL5A3-202ENST00000461214 COL4A1P02462 1669 aa18■□□□□ 0.47
COL5A3-202ENST00000461214 POTEIP0CG38 1075 aa18■□□□□ 0.47
COL5A3-202ENST00000461214 POTEJP0CG39 1038 aa18■□□□□ 0.47
COL5A3-202ENST00000461214 PDE6BP35913 854 aa18■□□□□ 0.47
COL5A3-202ENST00000461214 IRX6P78412 446 aaPredicted RBP18■□□□□ 0.47
COL5A3-202ENST00000461214 CRY2Q49AN0 593 aa18■□□□□ 0.47
COL5A3-202ENST00000461214 SYNE4Q8N205 404 aa18■□□□□ 0.47
COL5A3-202ENST00000461214 EXOC6Q8TAG9 804 aa18■□□□□ 0.47
COL5A3-202ENST00000461214 NLRP3Q96P20 1036 aa18■□□□□ 0.47
COL5A3-202ENST00000461214 BICC1Q9H694 974 aaKnown RBP18■□□□□ 0.47
COL5A3-202ENST00000461214 CNTNAP1P78357 1384 aa18■□□□□ 0.47
COL5A3-202ENST00000461214 KLRG2A4D1S0 409 aaPredicted RBP17.99■□□□□ 0.47
COL5A3-202ENST00000461214 HCLS1P14317 486 aaPredicted RBP17.99■□□□□ 0.47
COL5A3-202ENST00000461214 FOXO4P98177 505 aa17.99■□□□□ 0.47
COL5A3-202ENST00000461214 SF3B3Q15393 1217 aaKnown RBP17.99■□□□□ 0.47
COL5A3-202ENST00000461214 ERICH6BQ5W0A0 696 aa17.99■□□□□ 0.47
COL5A3-202ENST00000461214 JARID2Q92833 1246 aaPredicted RBP17.99■□□□□ 0.47
COL5A3-202ENST00000461214 FER1L6Q2WGJ9 1857 aa17.99■□□□□ 0.47
COL5A3-202ENST00000461214 CCDC88AQ3V6T2 1871 aa17.99■□□□□ 0.47
COL5A3-202ENST00000461214 CSF1RP07333 972 aa17.98■□□□□ 0.47
COL5A3-202ENST00000461214 VEGFBP49765 207 aa17.98■□□□□ 0.47
COL5A3-202ENST00000461214 MLLT1Q03111 559 aaPredicted RBP17.98■□□□□ 0.47
COL5A3-202ENST00000461214 CCDC152Q4G0S7 254 aa17.98■□□□□ 0.47
COL5A3-202ENST00000461214 ANKRD44Q8N8A2 993 aa17.98■□□□□ 0.47
COL5A3-202ENST00000461214 ZNF219Q9P2Y4 722 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms